Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CSDC2

Gene Name Gene ID Reads Annotation
CSDC2 ENSGALG00000030101 596 cold shock domain containing C2 [Source:HGNC Symbol;Acc:HGNC:30359]











Genes with expression patterns similar to CSDC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CSDC2 ENSGALG00000030101 596 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cold shock domain containing C2 [Source:HGNC Symbol;Acc:HGNC:30359]
2. PCGF2 ENSGALG00000018815 38 1.524 - - - - - 0.726 0.798 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
3. CILP ENSGALG00000007358 20 0.858 - - - - - 0.858 - - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
4. ASB13 ENSGALG00000008401 181 0.855 - - - - - - 0.855 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
5. PLCXD1 ENSGALG00000016721 289 0.849 - - - - - - 0.849 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
6. ZNF148 ENSGALG00000012049 365 0.847 - - - - - - 0.847 - - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
7. IFT27 ENSGALG00000042990 221 0.847 - - - - - - 0.847 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
8. CPNE7 ENSGALG00000000507 54 0.827 - - - - - - 0.827 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
9. CADM2 ENSGALG00000043393 810 0.824 - - - - - - 0.824 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
10. SVOPL ENSGALG00000012812 27 0.812 - - - - - - 0.812 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
11. ZNFX1 ENSGALG00000004859 33 0.812 - - - - 0.812 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
12. TRIM71 ENSGALG00000019622 1633 0.812 - - - - - - 0.812 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
13. PRKAR2B ENSGALG00000008060 40 0.81 - - - - 0.810 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
14. gga-mir-99a ENSGALG00000018242 192 0.81 - - - - 0.810 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
15. TRIM14 ENSGALG00000015315 22 0.81 - - - - 0.810 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
16. THRB ENSGALG00000011294 7 0.81 - - - - 0.810 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
17. LOC770996 ENSGALG00000016570 635 0.81 - - - - - - 0.810 - - - L-gulonolactone oxidase-like
18. IL22RA1 ENSGALG00000004221 71 0.81 - - - - 0.810 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
19. NFKB2 ENSGALG00000005653 39 0.809 - - - - - 0.809 - - - - nuclear factor kappa B subunit 2 [Source:NCBI gene;Acc:386574]
20. CEP170B ENSGALG00000011639 71 0.809 - - - - 0.809 - - - - - centrosomal protein 170B, transcript variant X13
21. ZDHHC5 ENSGALG00000007362 296 0.808 - - - - - - 0.808 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
22. C1QTNF3 ENSGALG00000027887 8646 0.808 - - - - - - - - - 0.808 C1q and tumor necrosis factor related protein 3, transcript variant X1
23. C18H17ORF67 ENSGALG00000024428 10 0.807 - - - - - - 0.807 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
24. ANO3 ENSGALG00000013311 16 0.807 - - - - - - 0.807 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
25. TEX2 ENSGALG00000003496 23 0.807 - - - - - - 0.807 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
26. DCBLD1 ENSGALG00000014907 19 0.807 - - - - - - 0.807 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
27. MUC5B MUC5B 62 0.807 - - - - - - 0.807 - - -
28. ENSGALG00000023475 ENSGALG00000023475 19 0.807 - - - - - - 0.807 - - -
29. ABLIM2 ENSGALG00000043448 48 0.806 - - - - - - - 0.806 - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
30. SLCO1B1 ENSGALG00000019276 7 0.803 - - - - 0.803 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
31. SNORD2 SNORD2 51 0.802 - - - - - - 0.802 - - -
32. NAPRT1 NAPRT1 227 0.802 - - - - - - 0.802 - - -
33. TDRD5 ENSGALG00000033634 40 0.802 - - - - - - 0.802 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
34. CDH22 ENSGALG00000007211 250 0.802 - - - - - - - - 0.802 - cadherin 22 [Source:HGNC Symbol;Acc:HGNC:13251]
35. LAMP1 ENSGALG00000037697 247 0.801 - - - - - - 0.801 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
36. POFUT1 ENSGALG00000006594 367 0.8 - - - - - - 0.800 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
37. FAM82B FAM82B 374 0.8 - - - - - - 0.800 - - -
38. PRR15L ENSGALG00000046413 27 0.799 - - - - - 0.799 - - - - proline rich 15 like [Source:HGNC Symbol;Acc:HGNC:28149]
39. CNR1 ENSGALG00000037511 38 0.798 - - - - 0.798 - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
40. ENSGALG00000027427 ENSGALG00000027427 16 0.798 - - - - 0.798 - - - - -
41. VTI1B ENSGALG00000009526 133 0.796 - - - - - - 0.796 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
42. LRRC42 ENSGALG00000010743 384 0.796 - - - - - - 0.796 - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
43. MOCOS ENSGALG00000013149 25 0.794 - - - - - - 0.794 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
44. CCDC28A ENSGALG00000013834 8 0.794 - - - - - - - 0.794 - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
45. NKD1 ENSGALG00000003767 76 0.792 - - - - - - 0.792 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
46. GHDC ENSGALG00000003333 178 0.791 - - - - - - 0.791 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
47. DDX55 ENSGALG00000003298 2315 0.79 - - - - - - 0.790 - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
48. LMCD1 ENSGALG00000008349 928 0.79 - - - - - - 0.790 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
49. FADS2 ENSGALG00000007178 116 0.789 - - - - - - - 0.789 - - fatty acid desaturase 2 [Source:NCBI gene;Acc:423122]
50. ARMC7 ENSGALG00000007961 217 0.787 - - - - - 0.787 - - - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
51. WARS ENSGALG00000011228 193 0.787 - - - - 0.787 - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
52. RASL12 ENSGALG00000007349 88 0.786 - - - - - 0.786 - - - - RAS like family 12 [Source:HGNC Symbol;Acc:HGNC:30289]
53. MALSU1 ENSGALG00000010954 51 0.785 - - - - 0.785 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
54. ENSGALG00000029120 ENSGALG00000029120 73 0.785 - - - - - - 0.785 - - -
55. KRT222 ENSGALG00000003859 53 0.785 - - - - - - 0.785 - - - keratin 222 [Source:NCBI gene;Acc:420046]
56. C9orf171 C9orf171 35 0.784 - - - - - - 0.784 - - -
57. MAL2 ENSGALG00000040768 75 0.784 - - - - 0.784 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
58. TSPAN14 ENSGALG00000002414 69 0.783 - - - - - - 0.783 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
59. GPM6A ENSGALG00000043480 2133 0.782 - - - - - - - - - 0.782 glycoprotein M6A [Source:NCBI gene;Acc:422569]
60. ENDOV 121 0.782 - - - - - - 0.782 - - - endonuclease V
61. NCOA6 ENSGALG00000001182 83 0.781 - - - - - - 0.781 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
62. VIMENTIN VIMENTIN 33105 0.78 - - - - - - - - - 0.780
63. TMEM45A ENSGALG00000015293 95 0.78 - - - - - - - 0.780 - - transmembrane protein 45A [Source:NCBI gene;Acc:418389]
64. ABCA2 ENSGALG00000036894 12 0.78 - - - - - 0.780 - - - - ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
65. MMR1L4 ENSGALG00000028304 81 0.779 - - - - - - 0.779 - - - Gallus gallus macrophage mannose receptor 1-like 4 (MMR1L4), mRNA. [Source:RefSeq mRNA;Acc:NM_001319013]
66. TNRC6B ENSGALG00000012050 613 0.779 - - - - - - 0.779 - - - trinucleotide repeat containing 6B, transcript variant X10
67. ELK4 ENSGALG00000042137 69 0.779 - - - - - - 0.779 - - - ELK4, ETS transcription factor
68. HTR2C ENSGALG00000005853 90 0.778 - - - - - - 0.778 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
69. SCUBE1 ENSGALG00000014178 91 0.778 - - - - 0.778 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
70. KCTD5 ENSGALG00000006423 192 0.777 - - - - - - 0.777 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
71. ATP13A2 ENSGALG00000003774 271 0.776 - - - - - 0.776 - - - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
72. TP53I3 ENSGALG00000016502 178 0.776 - - - - - - 0.776 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
73. ENSGALG00000026802 ENSGALG00000026802 14688 0.775 - - - - - - - - - 0.775
74. F13A1 ENSGALG00000012802 16 0.773 - - - - - - - 0.773 - - coagulation factor XIII A chain [Source:NCBI gene;Acc:395420]
75. BBS12 142 0.772 - - - - - - 0.772 - - - Bardet-Biedl syndrome 12
76. OSMR ENSGALG00000003747 4 0.772 - - - - - - - 0.772 - - oncostatin M receptor [Source:HGNC Symbol;Acc:HGNC:8507]
77. NT5C1B ENSGALG00000016471 1378 0.772 - - - - - 0.772 - - - - 5'-nucleotidase, cytosolic IB
78. ENSGALG00000005433 ENSGALG00000005433 55 0.771 - - - - 0.771 - - - - -
79. ATP6V1AL ENSGALG00000000048 21 0.77 - - - - - - 0.770 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
80. MAP3K1 ENSGALG00000014718 60 0.77 - - - - - - 0.770 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
81. SUGP2 ENSGALG00000003047 227 0.77 - - - - - - - 0.770 - - SURP and G-patch domain containing 2 [Source:NCBI gene;Acc:420113]
82. ARHGAP28 ENSGALG00000014758 34 0.768 - - - - - - - 0.768 - - Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
83. ARHGAP15 ENSGALG00000012421 58 0.768 - - - - - - 0.768 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
84. CD164 30 0.768 - - - - - - - 0.768 - - CD164 molecule, transcript variant X2
85. TSPAN4 ENSGALG00000006837 150 0.767 - - - - - - 0.767 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
86. S100A13 ENSGALG00000046614 201 0.766 - - - - - - - 0.766 - - S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
87. FAM76B ENSGALG00000017202 688 0.766 - - - - - - 0.766 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
88. FGB ENSGALG00000009262 1169 0.766 - - - - - - 0.766 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
89. ENSGALG00000012463 ENSGALG00000012463 242 0.765 - - - - - - 0.765 - - -
90. RIPPLY2 ENSGALG00000015845 34 0.764 - - - - - - 0.764 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
91. ENTPD5 ENSGALG00000010202 69 0.764 - - - - - - - 0.764 - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
92. ENSGALG00000005812 ENSGALG00000005812 40 0.764 - - - - - - - 0.764 - -
93. ENSGALG00000026696 ENSGALG00000026696 126 0.763 - - - - - - - 0.763 - -
94. TAGLN3 ENSGALG00000015379 7865 0.763 - - - - - - - - - 0.763 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
95. MBOAT2 ENSGALG00000016412 194 0.761 - - - - - - - 0.761 - - membrane bound O-acyltransferase domain containing 2 [Source:NCBI gene;Acc:421925]
96. SLC24A2 ENSGALG00000015080 54 0.76 - - - - 0.760 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
97. RAB37 ENSGALG00000027789 17 0.76 - - - - 0.760 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
98. FBXL18 ENSGALG00000004611 97 0.759 - - - - - - 0.759 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
99. MBD5 ENSGALG00000012449 27 0.759 - - - - - - - 0.759 - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
100. NSG1 ENSGALG00000015010 5829 0.759 - - - - - - - - - 0.759 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]

There are 166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA