Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CRTAP

Gene Name Gene ID Reads Annotation
CRTAP ENSGALG00000034163 6453 cartilage associated protein [Source:NCBI gene;Acc:395992]











Genes with expression patterns similar to CRTAP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CRTAP ENSGALG00000034163 6453 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cartilage associated protein [Source:NCBI gene;Acc:395992]
2. PHLDB2 ENSGALG00000015377 8560 1.643 - - - - - - 0.862 0.781 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
3. TOR1AIP1 ENSGALG00000029238 5843 1.625 - - - - - - 0.794 0.831 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
4. MTMR8 ENSGALG00000007590 6022 1.623 - - - - - - 0.839 0.784 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
5. ACSS2 ENSGALG00000003362 3023 1.618 - - - - - - 0.712 0.906 - - acyl-CoA synthetase short chain family member 2 [Source:HGNC Symbol;Acc:HGNC:15814]
6. LIMS1 ENSGALG00000029970 7244 1.613 - - - - - - 0.767 0.846 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
7. ITFG2 ENSGALG00000014335 1896 1.604 - - - - - - 0.728 0.876 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
8. BET1L ENSGALG00000004172 5305 1.587 - - - - - - 0.739 0.848 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
9. NET1 ENSGALG00000008437 9850 1.584 - - - - - - 0.790 - - 0.794 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
10. TSPAN12 ENSGALG00000009029 2145 1.583 - - - - - - - 0.720 - 0.863 tetraspanin 12 [Source:NCBI gene;Acc:417763]
11. FBXL17 ENSGALG00000000276 2443 1.579 - - - - - - - 0.873 - 0.706 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
12. RELL1 ENSGALG00000014336 2950 1.572 - - - - - - 0.735 0.837 - - RELT like 1 [Source:NCBI gene;Acc:422795]
13. PHF2 ENSGALG00000039208 2003 1.561 - - - - - - - 0.857 - 0.704 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
14. SLC39A9 ENSGALG00000009438 4838 1.559 - - - - - - 0.735 0.824 - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
15. TMED10 ENSGALG00000010318 9317 1.538 - - - - - - 0.707 - - 0.831 transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
16. ACTN1 ENSGALG00000042458 10477 1.528 - - - - 0.717 - 0.811 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
17. CHCHD6 ENSGALG00000006056 6121 1.511 - - - - - - 0.724 - - 0.787 coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
18. MCFD2 ENSGALG00000010017 8905 1.502 - - - - - - 0.710 - - 0.792 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
19. ITGB1 ENSGALG00000007145 19551 1.497 - - - - - - 0.766 - - 0.731 integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
20. PDCD7 ENSGALG00000021027 3807 1.493 - - - - - - 0.715 - - 0.778 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
21. MLST8 ENSGALG00000005878 8116 1.482 - - - - - - 0.771 - - 0.711 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
22. TBC1D1 ENSGALG00000039380 4423 1.478 - - - - - - 0.748 - - 0.730 TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
23. CTSL2 CTSL2 7966 1.47 - - - - - - 0.727 - - 0.743
24. GPALPP1 ENSGALG00000031567 4221 1.45 - - - - - - 0.701 0.749 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
25. PTTG1 17936 1.44 - - - - - - 0.711 0.729 - - pituitary tumor-transforming 1, transcript variant X1
26. TET1 ENSGALG00000031604 13002 1.429 - - - - - - 0.713 - - 0.716 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
27. CLMP ENSGALG00000006507 8079 0.915 - - - - - - - 0.915 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
28. TRADD ENSGALG00000003195 1103 0.901 - - - - - - - - - 0.901 TNFRSF1A associated via death domain [Source:HGNC Symbol;Acc:HGNC:12030]
29. CPT2 ENSGALG00000010681 3211 0.898 - - - - - - - 0.898 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
30. MMP15 ENSGALG00000038758 49988 0.893 - - - - - - - 0.893 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
31. GNG12 ENSGALG00000026591 5817 0.889 - - - - - - - 0.889 - - G protein subunit gamma 12, transcript variant X21
32. TCTN2 ENSGALG00000023683 3596 0.888 - - - - - - - 0.888 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
33. DENND1A ENSGALG00000001157 503 0.884 - - - - - - - - - 0.884 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
34. RCAN3 ENSGALG00000004282 7778 0.881 - - - - - - - 0.881 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
35. PLDN PLDN 1803 0.879 - - - - - - - 0.879 - -
36. FBXO7 ENSGALG00000012569 4124 0.878 - - - - - - - 0.878 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
37. LBP ENSGALG00000006756 1684 0.877 - - - - - - - 0.877 - - lipopolysaccharide binding protein, transcript variant X1
38. PDLIM5 ENSGALG00000012211 3064 0.874 - - - - - - - 0.874 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
39. ALAS1 3660 0.873 - - - - - - - 0.873 - - 5'-aminolevulinate synthase 1, transcript variant X1
40. TTC8 ENSGALG00000010663 1556 0.873 - - - - - - - 0.873 - - tetratricopeptide repeat domain 8 [Source:HGNC Symbol;Acc:HGNC:20087]
41. AIP ENSGALG00000040247 4166 0.87 - - - - - - - 0.870 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
42. AGGF1 ENSGALG00000004311 3011 0.866 - - - - - - - 0.866 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
43. HYAL1 ENSGALG00000000785 1778 0.866 - - - - - - - 0.866 - - hyaluronoglucosaminidase 1, transcript variant X3
44. SMG8 ENSGALG00000005093 5557 0.866 - - - - - - - 0.866 - - SMG8 nonsense mediated mRNA decay factor
45. BRCA1 ENSGALG00000002781 2052 0.865 - - - - - - - 0.865 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
46. RNH1 ENSGALG00000006904 14542 0.865 - - - - - - - 0.865 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
47. DOK5 ENSGALG00000007786 1732 0.864 - - - - - - - 0.864 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
48. PTPN4 3030 0.861 - - - - - - - 0.861 - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
49. C9H21ORF2 C9H21ORF2 3161 0.86 - - - - - - - 0.860 - -
50. TAF1A ENSGALG00000009441 2431 0.859 - - - - - - - 0.859 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
51. CALML4 ENSGALG00000007979 6395 0.859 - - - - - - 0.859 - - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
52. UPF1 ENSGALG00000003220 9496 0.859 - - - - - - - 0.859 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
53. CREBL2 ENSGALG00000037030 1247 0.859 - - - - - - - 0.859 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
54. ADD1 ENSGALG00000015664 6828 0.858 - - - - - - 0.858 - - - adducin 1 [Source:NCBI gene;Acc:422882]
55. ARID2 ENSGALG00000033074 3461 0.857 - - - - - - - 0.857 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
56. ZNF384 ENSGALG00000032599 2369 0.857 - - - - - - - 0.857 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
57. ENSGALG00000021439 ENSGALG00000021439 628 0.856 - - - - - - - 0.856 - -
58. STOML2 STOML2 15566 0.856 - - - - - - - 0.856 - -
59. ERMARD ENSGALG00000011186 1001 0.856 - - - - - - - 0.856 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
60. FBXL8 ENSGALG00000003201 847 0.855 - - - - - - - 0.855 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
61. PDLIM7 ENSGALG00000026159 4700 0.854 - - - - - - - 0.854 - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
62. MXD4 ENSGALG00000015688 1472 0.853 - - - - - - - 0.853 - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
63. AGRN ENSGALG00000039193 8135 0.853 - - - - - - - 0.853 - - agrin [Source:NCBI gene;Acc:396538]
64. INTS8 ENSGALG00000037955 3349 0.853 - - - - - - - - - 0.853 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
65. PECR ENSGALG00000011497 1714 0.853 - - - - - - - 0.853 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
66. SPINZ SPINZ 10341 0.852 - - - - - - 0.852 - - -
67. PTX3 ENSGALG00000028284 2984 0.851 - - - - - - - 0.851 - - pentraxin 3 [Source:NCBI gene;Acc:548626]
68. BACE2 ENSGALG00000034932 1570 0.85 - - - - - - - 0.850 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
69. DERL1 ENSGALG00000033950 15074 0.849 - - - - - - 0.849 - - - derlin 1 [Source:NCBI gene;Acc:420350]
70. PRPF40A ENSGALG00000012526 7724 0.848 - - - - - - - 0.848 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
71. MTIF2 ENSGALG00000031265 2366 0.848 - - - - - - - 0.848 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
72. HSD17B7 ENSGALG00000037852 4750 0.848 - - - - - - - 0.848 - - hydroxysteroid 17-beta dehydrogenase 7 [Source:NCBI gene;Acc:424367]
73. TTC38 ENSGALG00000014551 1135 0.848 - - - - - - - 0.848 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
74. MASP1 ENSGALG00000007419 141 0.848 - - - - - - - - - 0.848 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
75. RASA3 ENSGALG00000016817 2146 0.847 - - - - - - - 0.847 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
76. CREPT CREPT 17142 0.846 - - - - - - - 0.846 - -
77. ENSGALG00000018634 ENSGALG00000018634 414 0.845 - - - - - - - 0.845 - -
78. IBTK ENSGALG00000015864 3154 0.845 - - - - - - - 0.845 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
79. PRR11 2624 0.844 - - - - - - - - - 0.844 proline rich 11, transcript variant X8
80. NPNT ENSGALG00000043555 3002 0.844 - - - - - - - 0.844 - - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
81. LRIG3 ENSGALG00000009755 6655 0.842 - - - - - - - 0.842 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
82. BUD13_1 ENSGALG00000025882 1118 0.841 - - - - - - - 0.841 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
83. TGFB3 ENSGALG00000010346 3118 0.84 - - - - - - - - - 0.840 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
84. ADAM10 ENSGALG00000004212 568 0.839 - - - - - - - - - 0.839 ADAM metallopeptidase domain 10 [Source:NCBI gene;Acc:374113]
85. CCNL2 ENSGALG00000001551 2620 0.839 - - - - - - - 0.839 - - cyclin L2 [Source:NCBI gene;Acc:395124]
86. TXNDC11 ENSGALG00000003154 2224 0.839 - - - - - - - 0.839 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
87. RNF185 ENSGALG00000006960 5428 0.839 - - - - - - - 0.839 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
88. PREP ENSGALG00000015405 17050 0.839 - - - - - - 0.839 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
89. FOXP1 127 0.838 - - - - - - - - - 0.838 forkhead box P1, transcript variant X14
90. SNX12 ENSGALG00000005659 9503 0.837 - - - - - - - 0.837 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
91. ISCU ENSGALG00000004869 6852 0.836 - - - - - - - 0.836 - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
92. CKAP5 ENSGALG00000008325 8494 0.835 - - - - - - 0.835 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
93. PURH PURH 28410 0.835 - - - - - - - - - 0.835
94. YIPF6 ENSGALG00000035973 3333 0.835 - - - - - - - - - 0.835 Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
95. PTCD3 ENSGALG00000015773 3059 0.835 - - - - - - 0.835 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
96. RIOK2 ENSGALG00000015288 6280 0.834 - - - - - - 0.834 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
97. RFXANK ENSGALG00000037261 2432 0.834 - - - - - - - - - 0.834 regulatory factor X associated ankyrin containing protein [Source:NCBI gene;Acc:426623]
98. FBXL2 ENSGALG00000030175 157 0.833 - - - - - - - - - 0.833 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
99. SMC4 ENSGALG00000009553 15715 0.833 - - - - - - 0.833 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
100. COMMD4 ENSGALG00000001572 31664 0.833 - - - - - - - - - 0.833 COMM domain containing 4 [Source:NCBI gene;Acc:770048]

There are 689 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA