Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CRNKL1

Gene Name Gene ID Reads Annotation
CRNKL1 ENSGALG00000008429 7280 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]











Genes with expression patterns similar to CRNKL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CRNKL1 ENSGALG00000008429 7280 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
2. RBM7 ENSGALG00000007017 8779 1.764 - - - - - - 0.772 0.992 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
3. PRTG ENSGALG00000037336 34665 1.758 - - - - - - - 0.952 - 0.806 protogenin [Source:NCBI gene;Acc:415407]
4. TMEM192 ENSGALG00000009528 2428 1.718 - - - - - - 0.723 0.995 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
5. FUNDC2 ENSGALG00000029585 9334 1.712 - - - - - - 0.718 0.994 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
6. ENSGALG00000017396 ENSGALG00000017396 9028 1.658 - - - - - - 0.750 0.908 - -
7. FAM98A ENSGALG00000010428 9585 1.6 - - - - - - 0.703 0.897 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
8. FCF1 ENSGALG00000010275 24928 1.556 - - - - - - 0.794 0.762 - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
9. MED17 ENSGALG00000017218 5821 1.527 - - - - - - 0.710 - 0.817 - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
10. CCDC12 ENSGALG00000005487 8190 1.52 - - - - - - 0.730 - 0.790 - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
11. RRP1B ENSGALG00000035696 12309 1.511 - - - - - - 0.784 - 0.727 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
12. SS18 ENSGALG00000015119 4687 1.508 - - - - - - 0.742 - 0.766 - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
13. CAMK2G ENSGALG00000005088 5037 1.504 - - - - - - 0.742 - 0.762 - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
14. TET1 ENSGALG00000031604 13002 1.471 - - - - 0.754 - 0.717 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
15. FKBP15 ENSGALG00000008838 3677 1.469 - - - - - - 0.713 - 0.756 - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
16. GID8 ENSGALG00000005700 3992 1.451 - - - - - - 0.745 - - 0.706 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
17. TERF2 ENSGALG00000000657 7865 1.443 - - - - - - 0.737 0.706 - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
18. ATE1 ENSGALG00000009502 3751 0.995 - - - - - - - 0.995 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
19. CENPL ENSGALG00000038411 4867 0.995 - - - - - - - 0.995 - - centromere protein L [Source:NCBI gene;Acc:426563]
20. CETN1 ENSGALG00000026741 7243 0.994 - - - - - - - 0.994 - - centrin 1 [Source:NCBI gene;Acc:422668]
21. CDCA7 ENSGALG00000040833 7484 0.994 - - - - - - - 0.994 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
22. TMEM126A ENSGALG00000014066 6149 0.993 - - - - - - - 0.993 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
23. RNFT1 ENSGALG00000005205 2888 0.993 - - - - - - - 0.993 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
24. NVL ENSGALG00000009322 5286 0.993 - - - - - - - 0.993 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
25. PDHB ENSGALG00000029576 12254 0.993 - - - - - - - 0.993 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
26. RCOR3 ENSGALG00000009871 7022 0.993 - - - - - - - 0.993 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
27. C6ORF192 C6ORF192 4224 0.993 - - - - - - - 0.993 - -
28. PMP22 ENSGALG00000031425 5358 0.992 - - - - - - - 0.992 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
29. RFT1 ENSGALG00000001945 2446 0.992 - - - - - - - 0.992 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
30. MAP2K2 ENSGALG00000001267 3857 0.992 - - - - - - - 0.992 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
31. PPM1D ENSGALG00000035610 6530 0.992 - - - - - - - 0.992 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
32. DLC1 ENSGALG00000013715 5297 0.992 - - - - - - - 0.992 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
33. CRELD2 ENSGALG00000008551 2084 0.992 - - - - - - - 0.992 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
34. EXO1 ENSGALG00000010748 7572 0.991 - - - - - - - 0.991 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
35. ZNF319 ENSGALG00000000999 1272 0.991 - - - - - - - 0.991 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
36. SNIP1 ENSGALG00000002010 1429 0.991 - - - - - - - 0.991 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
37. SLC35D1 ENSGALG00000011121 4456 0.991 - - - - - - - 0.991 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
38. RAI2 ENSGALG00000016538 1074 0.99 - - - - - - - 0.990 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
39. ELAVL4 ENSGALG00000010533 4978 0.99 - - - - - - - 0.990 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
40. RNF168 ENSGALG00000006392 507 0.99 - - - - - - - 0.990 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
41. PIGL ENSGALG00000004492 669 0.99 - - - - - - - 0.990 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
42. ENSGALG00000012250 ENSGALG00000012250 581 0.99 - - - - - - - 0.990 - -
43. ATP2B4 ENSGALG00000003601 3746 0.99 - - - - - - - 0.990 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
44. FBF1 ENSGALG00000002179 1738 0.989 - - - - - - - 0.989 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
45. SPDYA ENSGALG00000017392 503 0.989 - - - - - - - 0.989 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
46. gga-mir-6587 ENSGALG00000026386 9441 0.989 - - - - - - - 0.989 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
47. PDCD6IP ENSGALG00000033500 580 0.989 - - - - - - - 0.989 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
48. G3BP2 ENSGALG00000010882 21129 0.989 - - - - - - - 0.989 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
49. NBL1 ENSGALG00000040297 8165 0.988 - - - - - - - 0.988 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
50. ALS2 ENSGALG00000008415 2576 0.988 - - - - - - - 0.988 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
51. PPP3R1 ENSGALG00000023648 3417 0.987 - - - - - - - 0.987 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
52. TTL ENSGALG00000008614 3991 0.987 - - - - - - - 0.987 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
53. YAF2 ENSGALG00000009540 8452 0.987 - - - - - - - 0.987 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
54. IFNAR2 ENSGALG00000041867 1596 0.983 - - - - - - - 0.983 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
55. COX7A2L ENSGALG00000037996 13646 0.981 - - - - - - - 0.981 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
56. JSC JSC 7982 0.976 - - - - - - - 0.976 - -
57. RFC3 ENSGALG00000017064 7011 0.97 - - - - - - - 0.970 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
58. AP2B1 ENSGALG00000042125 13229 0.969 - - - - - - - 0.969 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
59. GARS ENSGALG00000005694 18264 0.968 - - - - - - - 0.968 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
60. KIAA0196 KIAA0196 4011 0.964 - - - - - - - 0.964 - -
61. SBNO1 ENSGALG00000003392 6731 0.959 - - - - - - - 0.959 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
62. TPD52 ENSGALG00000040167 9891 0.958 - - - - - - - 0.958 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
63. XPO5 ENSGALG00000010341 24765 0.957 - - - - - - - 0.957 - - exportin 5 [Source:NCBI gene;Acc:421450]
64. INPP5A ENSGALG00000010493 6769 0.955 - - - - - - - 0.955 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
65. NUP107 ENSGALG00000009934 2097 0.952 - - - - - - - 0.952 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
66. SFT2D1 ENSGALG00000020005 10855 0.952 - - - - - - - 0.952 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
67. ANKRD11 ENSGALG00000006222 12327 0.95 - - - - - - - 0.950 - - ankyrin repeat domain 11, transcript variant X2
68. XRCC5 ENSGALG00000011492 6802 0.933 - - - - - - - 0.933 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
69. MRPL54 ENSGALG00000027611 39450 0.932 - - - - - - - 0.932 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
70. PPA2 ENSGALG00000010582 22301 0.928 - - - - - - - 0.928 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
71. CHD4 ENSGALG00000013565 25695 0.916 - - - - - - - 0.916 - - chromodomain helicase DNA binding protein 4
72. Sep-02_1 Sep-02_1 19203 0.91 - - - - - - - 0.910 - -
73. SLC25A39 ENSGALG00000042894 10654 0.905 - - - - - - - 0.905 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
74. MARVELD2 ENSGALG00000027140 828 0.898 - - - - - - - - 0.898 - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
75. TNFAIP8L1 ENSGALG00000004266 12611 0.897 - - - - - - - 0.897 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
76. CDC40 ENSGALG00000015061 6118 0.894 - - - - - - 0.894 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
77. CDC42EP4 ENSGALG00000023364 9240 0.893 - - - - - - - 0.893 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
78. LRPPRC ENSGALG00000009967 17091 0.891 - - - - - - - 0.891 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
79. ZOV3 ZOV3 3267 0.889 - - - - - - - 0.889 - -
80. STOX2 ENSGALG00000010646 1161 0.883 - - - - - - - - 0.883 - storkhead box 2 [Source:HGNC Symbol;Acc:HGNC:25450]
81. SLCO4A1 ENSGALG00000005460 109 0.883 - - - - - - - - 0.883 - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
82. ENSGALG00000023609 ENSGALG00000023609 6933 0.867 - - - - - - - 0.867 - -
83. CARS2 ENSGALG00000016847 3814 0.866 - - - - - - - - 0.866 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
84. H4-I H4-I 2327 0.863 - - - - - - - - 0.863 -
85. GTF3C1 ENSGALG00000007387 5788 0.861 - - - - - - - - 0.861 - general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
86. PPARD ENSGALG00000002588 962 0.861 - - - - - - - - 0.861 - peroxisome proliferator activated receptor delta [Source:NCBI gene;Acc:395479]
87. SNX2 ENSGALG00000005337 590 0.861 - - - - - - - - 0.861 - sorting nexin 2 [Source:NCBI gene;Acc:426797]
88. RALGAPA2 240 0.858 - - - - - - - - 0.858 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
89. LHCGR ENSGALG00000009095 174 0.856 - - - - - - - - 0.856 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
90. ALMS1 ENSGALG00000044620 570 0.855 - - - - - - - - 0.855 - ALMS1, centrosome and basal body associated protein, transcript variant X1
91. ATP6V1G1 ENSGALG00000007190 82534 0.854 - - - - - - - 0.854 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
92. GNMT ENSGALG00000043290 3288 0.854 - - - - - - - - 0.854 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
93. POLR3H ENSGALG00000011947 2899 0.851 - - - - - - - - 0.851 - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
94. RFFL ENSGALG00000002225 928 0.85 - - - - - - - - 0.850 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
95. SLTM ENSGALG00000004192 3244 0.85 - - - - - - - - 0.850 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
96. KLHL15 ENSGALG00000016345 1638 0.849 - - - - - - - - 0.849 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
97. ARPC2 ENSGALG00000011452 7338 0.848 - - - - - - - - 0.848 - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
98. FANCB ENSGALG00000016569 1193 0.847 - - - - - - - - 0.847 - FA complementation group B [Source:NCBI gene;Acc:418628]
99. CCNH ENSGALG00000015641 8051 0.845 - - - - - - 0.845 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
100. DCP1B 1306 0.844 - - - - - - - - 0.844 - decapping mRNA 1B

There are 577 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA