Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CRIP1

Gene Name Gene ID Reads Annotation
CRIP1 ENSGALG00000002771 4270 cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]











Genes with expression patterns similar to CRIP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CRIP1 ENSGALG00000002771 4270 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
2. LECT1 LECT1 12694 3.183 - - 0.804 0.777 - 0.798 - - 0.804 -
3. SPON1 ENSGALG00000038775 16503 3.036 - - 0.820 0.744 0.716 - - - 0.756 - spondin 1 [Source:NCBI gene;Acc:395657]
4. PAX1 ENSGALG00000039040 3339 2.478 - - 0.862 0.852 - 0.764 - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
5. C1QTNF3 ENSGALG00000027887 8646 2.394 - - 0.852 0.818 - - - - 0.724 - C1q and tumor necrosis factor related protein 3, transcript variant X1
6. ACTC1 ENSGALG00000009844 20914 2.22 - 0.724 0.782 0.714 - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
7. CPZ ENSGALG00000030209 8822 1.717 - - - 0.833 - 0.884 - - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
8. TNFIP6 TNFIP6 3024 1.686 - 0.756 - - - 0.930 - - - -
9. ENSGALG00000010113 ENSGALG00000010113 508 1.627 - - 0.854 - - 0.773 - - - -
10. TCF15 ENSGALG00000026276 3646 1.6 - - 0.724 - - 0.876 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
11. SOX9 ENSGALG00000004386 14802 1.599 - - 0.851 0.748 - - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
12. COL9A3 ENSGALG00000005628 2842 1.579 - - 0.804 - - - - - 0.775 - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
13. LOX ENSGALG00000028063 1488 1.566 - - - 0.826 0.740 - - - - - lysyl oxidase [Source:NCBI gene;Acc:396474]
14. NEXN ENSGALG00000008945 1504 1.522 - - 0.767 0.755 - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
15. TNNC2 ENSGALG00000006835 2963 1.522 - 0.780 0.742 - - - - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
16. KERA ENSGALG00000011270 4204 1.51 - - - 0.702 - 0.808 - - - - keratocan [Source:NCBI gene;Acc:373995]
17. NGFR ENSGALG00000035950 13452 1.507 - 0.789 - - - 0.718 - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
18. TNNI1 ENSGALG00000000313 4069 1.503 - 0.773 0.730 - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
19. WWP2 ENSGALG00000000699 5040 1.493 - - 0.790 - - - - - 0.703 - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
20. gga-mir-7474 ENSGALG00000033766 5727 1.482 - - 0.734 0.748 - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
21. TNNT3 ENSGALG00000006572 1652 1.461 - 0.711 0.750 - - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
22. EFEMP1 ENSGALG00000037901 704 1.446 - - 0.735 0.711 - - - - - - EGF containing fibulin extracellular matrix protein 1 [Source:HGNC Symbol;Acc:HGNC:3218]
23. NKX-6.2 NKX-6.2 1370 0.917 - - - - - 0.917 - - - -
24. FABP5 ENSGALG00000041344 3984 0.904 - - - - - 0.904 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
25. SERPINF1 ENSGALG00000003015 5123 0.867 - - - - - 0.867 - - - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
26. KCNMB4 ENSGALG00000010044 377 0.862 - - - - - 0.862 - - - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
27. TBX22 ENSGALG00000004093 781 0.847 - - - - - 0.847 - - - - T-box 22 [Source:NCBI gene;Acc:373895]
28. EMILIN3 ENSGALG00000030012 6200 0.84 - - 0.840 - - - - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
29. EN1 ENSGALG00000042389 3051 0.829 - - 0.829 - - - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
30. ACTA1 ENSGALG00000011086 2543 0.828 - - 0.828 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
31. BMP3 ENSGALG00000035052 3260 0.822 - - - - - 0.822 - - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
32. FMOD ENSGALG00000034067 165 0.821 - - - - - 0.821 - - - - fibromodulin [Source:NCBI gene;Acc:395814]
33. MYBPC1 ENSGALG00000012783 317 0.82 - - 0.820 - - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
34. SMOC1 ENSGALG00000009415 2403 0.817 - - 0.817 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
35. GFRA4 ENSGALG00000036589 2733 0.817 - - - - - 0.817 - - - - GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]
36. NPM3 ENSGALG00000032329 21138 0.814 - - - - - 0.814 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
37. COL9A2 ENSGALG00000027526 4685 0.812 - - 0.812 - - - - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
38. SHH ENSGALG00000006379 1943 0.801 - - 0.801 - - - - - - - sonic hedgehog [Source:NCBI gene;Acc:395615]
39. PMP22 ENSGALG00000031425 5358 0.8 - - 0.800 - - - - - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
40. CYP1B1 ENSGALG00000025822 3143 0.799 - - 0.799 - - - - - - - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
41. GRM3 ENSGALG00000006576 474 0.796 - - - - - 0.796 - - - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
42. OLFML3 ENSGALG00000001956 28633 0.796 - - - - - 0.796 - - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
43. ACBD7 ENSGALG00000019663 2328 0.795 - - 0.795 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
44. MYL1 ENSGALG00000002907 1300 0.791 - - 0.791 - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
45. MYL2_1 ENSGALG00000004582 2367 0.781 - - 0.781 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
46. TIMP3 ENSGALG00000028627 8706 0.779 - - 0.779 - - - - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
47. ENSGALG00000028654 ENSGALG00000028654 236 0.778 - - - 0.778 - - - - - -
48. MYH1D ENSGALG00000027323 365 0.775 - - 0.775 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
49. COL9A1 ENSGALG00000015970 3788 0.771 - - 0.771 - - - - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
50. SHISA3 ENSGALG00000026042 1108 0.771 - - - - - 0.771 - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
51. MEOX2 ENSGALG00000010794 1556 0.767 - - - - - 0.767 - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
52. HOXB-7 HOXB-7 2066 0.767 - - - - - - 0.767 - - -
53. SRSF1 ENSGALG00000005525 4376 0.765 - - - - - - 0.765 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
54. T ENSGALG00000011489 2619 0.764 - - 0.764 - - - - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
55. MYF5 ENSGALG00000028091 1965 0.764 - 0.764 - - - - - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
56. SULF1 ENSGALG00000039553 5115 0.762 - - - - - 0.762 - - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
57. PKD2L2 ENSGALG00000006120 592 0.761 - - 0.761 - - - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
58. ZNF385B ENSGALG00000009012 290 0.761 - - 0.761 - - - - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
59. TNNI2 ENSGALG00000006591 690 0.761 - - 0.761 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
60. ALCAM ENSGALG00000015348 14283 0.76 - - - - - 0.760 - - - - activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
61. TAC1 ENSGALG00000009737 2211 0.759 - - 0.759 - - - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
62. ALDH6 ALDH6 771 0.756 - - - - - 0.756 - - - -
63. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 0.755 - - - - - - 0.755 - - - homer scaffolding protein 3, transcript variant X4
64. TNFAIP1 ENSGALG00000005715 3347 0.751 - - - - - - 0.751 - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
65. RPA3 ENSGALG00000010700 6212 0.749 - - - - - - 0.749 - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
66. CSTF1 ENSGALG00000007757 789 0.749 - - - - - - 0.749 - - - cleavage stimulation factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:2483]
67. IFI35 ENSGALG00000002832 1467 0.749 - - - - - - - 0.749 - - interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]
68. C9H2ORF82 ENSGALG00000040264 4201 0.748 - - 0.748 - - - - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
69. SECISBP2 ENSGALG00000010694 6990 0.748 - - - - - - 0.748 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
70. IQCB1 ENSGALG00000011655 378 0.746 - - - - - - 0.746 - - - IQ motif containing B1 [Source:HGNC Symbol;Acc:HGNC:28949]
71. CA9 ENSGALG00000021340 1431 0.746 - - - - - - 0.746 - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
72. CLN8 ENSGALG00000039606 4209 0.745 - - - - - - - 0.745 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
73. TNNT2 ENSGALG00000000302 568 0.743 - - 0.743 - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
74. FXYD6 ENSGALG00000025937 4073 0.743 - 0.743 - - - - - - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
75. SYTL2 1239 0.742 - - - - - - 0.742 - - - synaptotagmin like 2, transcript variant X2
76. MYL3 ENSGALG00000005448 3379 0.742 - - 0.742 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
77. RAB21 ENSGALG00000010183 7718 0.741 - - - - - - 0.741 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
78. KCNK1 ENSGALG00000011005 1643 0.739 - - - - - - 0.739 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
79. WHAMM ENSGALG00000006002 1678 0.739 - - - - - - 0.739 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
80. DPM2 ENSGALG00000005066 9121 0.738 - - - - - - 0.738 - - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
81. GNB1L ENSGALG00000001925 1981 0.738 - - - - - - 0.738 - - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
82. TRIM55 ENSGALG00000041327 1097 0.738 - - 0.738 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
83. P4HA3 ENSGALG00000042030 826 0.737 - 0.737 - - - - - - - - prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
84. COL8A1 ENSGALG00000015253 2505 0.737 - - 0.737 - - - - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
85. DHX35 ENSGALG00000003658 1090 0.736 - - - - - - 0.736 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
86. ADAMTSL1 1479 0.733 - - - - - - 0.733 - - - ADAMTS like 1, transcript variant X3
87. SETD3 ENSGALG00000034802 4125 0.732 - - - - - - 0.732 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
88. EPB41L1 ENSGALG00000034171 3616 0.732 - - - - - - - 0.732 - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
89. CCK ENSGALG00000029788 213 0.732 - - - - - - 0.732 - - - cholecystokinin [Source:NCBI gene;Acc:414884]
90. AKAP12 ENSGALG00000036240 64617 0.732 - - - - - 0.732 - - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
91. Mar-06 Mar-06 1218 0.73 - - - - - - 0.730 - - -
92. NDE1 ENSGALG00000032590 3277 0.73 - - - - - - 0.730 - - - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
93. ACTN2 ENSGALG00000014463 1724 0.729 - - 0.729 - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
94. ANXA8 ENSGALG00000005956 479 0.729 - - - - - - 0.729 - - - annexin A8, transcript variant X1
95. CDERMO-1 CDERMO-1 279 0.729 - - - - - 0.729 - - - -
96. MAK16 ENSGALG00000001663 7455 0.729 - - - - - - 0.729 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
97. TMTC2 ENSGALG00000010975 7040 0.727 - - - - - 0.727 - - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
98. TMEM182 ENSGALG00000038936 274 0.726 - - 0.726 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
99. FBN1 ENSGALG00000004960 2130 0.726 - - - - - - - 0.726 - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
100. WDR3 ENSGALG00000014791 5856 0.724 - - - - - - 0.724 - - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]

There are 55 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA