Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CRAT

Gene Name Gene ID Reads Annotation
CRAT ENSGALG00000037443 78 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]











Genes with expression patterns similar to CRAT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CRAT ENSGALG00000037443 78 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
2. CCDC39 ENSGALG00000021855 23 1.835 - - - - 0.898 - - 0.937 - - coiled-coil domain containing 39
3. UIMC1 ENSGALG00000001158 22 1.725 - - 0.888 - - 0.837 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
4. KAT6B ENSGALG00000005035 301 1.65 - - - - 0.787 - - - - 0.863 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
5. TRPA1 ENSGALG00000034751 148 1.637 - - - - - 0.736 - 0.901 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
6. LGALSL ENSGALG00000027096 390 1.609 - - - - 0.771 - - - - 0.838 galectin like [Source:NCBI gene;Acc:421278]
7. MAPKAPK3 ENSGALG00000002283 30 1.577 - - - - - 0.740 - 0.837 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
8. NAPG ENSGALG00000013932 67 1.567 - - 0.772 - - - - - - 0.795 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
9. TSPAN33 ENSGALG00000013528 832 1.49 - - - - - 0.760 - 0.730 - - tetraspanin 33, transcript variant X2
10. TMCC1 ENSGALG00000008487 65 0.94 - - - - 0.940 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
11. RANBP17 47 0.939 - - - - - - - 0.939 - - RAN binding protein 17
12. C9orf152 C9orf152 3 0.937 - - - - - - - 0.937 - -
13. MLNR ENSGALG00000017003 10 0.937 - - - - - - - 0.937 - - motilin receptor [Source:NCBI gene;Acc:428072]
14. ATP6V1A ENSGALG00000014800 4 0.937 - - - - - - - 0.937 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
15. ADRA2C ENSGALG00000015608 42 0.936 - - - - - - - 0.936 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
16. SMAD9 ENSGALG00000017050 11 0.936 - - - - - - - 0.936 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
17. CHFR ENSGALG00000002180 17 0.936 - - - - - - - 0.936 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
18. MCAM ENSGALG00000030027 26 0.933 - - - - 0.933 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
19. IRG1 IRG1 21 0.932 - - - - 0.932 - - - - -
20. ZNF385B ENSGALG00000009012 290 0.929 - - - - - - - - - 0.929 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
21. CYR61 ENSGALG00000008661 43 0.928 - - - - 0.928 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
22. ING5 ENSGALG00000006317 149 0.926 - - - - - - - - - 0.926 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
23. TDRD12 ENSGALG00000004704 19 0.925 - - - - 0.925 - - - - - tudor domain containing 12, transcript variant X3
24. ENSGALG00000025953 ENSGALG00000025953 65 0.924 - - - - 0.924 - - - - -
25. GRIN1 ENSGALG00000008898 18 0.923 - - - - 0.923 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
26. C10orf67 15 0.921 - - - - 0.921 - - - - - chromosome 10 open reading frame 67, transcript variant X2
27. TJP3 ENSGALG00000000748 45 0.92 - - - - 0.920 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
28. C9ORF9 C9ORF9 13 0.919 - - - - - - - 0.919 - -
29. ABCB11 ENSGALG00000010891 24 0.916 - - - - - - - 0.916 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
30. SLC30A9 ENSGALG00000031415 36 0.914 - - - - - - - - - 0.914 solute carrier family 30 member 9
31. MCF2 ENSGALG00000006562 59 0.911 - - - - - - - 0.911 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
32. NMRK2 ENSGALG00000025751 57 0.91 - - - - - - - 0.910 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
33. PHC2 62 0.909 - - - - 0.909 - - - - - polyhomeotic homolog 2
34. CHRM2 ENSGALG00000012894 21 0.905 - - - - - - - 0.905 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
35. CCDC147 CCDC147 53 0.905 - - - - - - - 0.905 - -
36. RAMP1 ENSGALG00000003821 389 0.901 - - - - - - - 0.901 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
37. LMTK2 ENSGALG00000003479 46 0.9 - - - - 0.900 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
38. KIAA1841 ENSGALG00000007825 22 0.898 - - 0.898 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
39. TM6SF1 ENSGALG00000006027 20 0.897 - - - - - - - - - 0.897 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
40. FAM208B 24 0.896 - - - - 0.896 - - - - - family with sequence similarity 208 member B, transcript variant X3
41. AKAP11 ENSGALG00000022739 82 0.895 - - - - - - - - - 0.895 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
42. TICRR ENSGALG00000006631 495 0.894 - - - - - - - 0.894 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
43. CAPN6 ENSGALG00000008006 16 0.892 - - 0.892 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
44. TPTE2 ENSGALG00000017031 29 0.892 - - 0.892 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
45. C1orf168 C1orf168 98 0.891 - - 0.891 - - - - - - -
46. SYT10 ENSGALG00000012911 17 0.891 - - - - 0.891 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
47. SDCCAG3 1208 0.891 - - - - 0.891 - - - - - serologically defined colon cancer antigen 3
48. GATA4 ENSGALG00000016662 6 0.888 - - 0.888 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
49. VEPH1 ENSGALG00000009682 51 0.888 - - 0.888 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
50. DENND6B ENSGALG00000043771 22 0.888 - - 0.888 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
51. RTDR1 RTDR1 104 0.886 - - - - 0.886 - - - - -
52. BLOC1S2 ENSGALG00000005794 544 0.884 - - - - - - - - - 0.884 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
53. C3orf58 ENSGALG00000002347 27 0.883 - - - - - - - - - 0.883 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
54. SENP7 ENSGALG00000044642 48 0.883 - - - - - - - - - 0.883 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
55. ZP2 ENSGALG00000002428 10 0.883 - - 0.883 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
56. BOK ENSGALG00000005772 117 0.882 - - - - - - - - - 0.882 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
57. gga-mir-6544 ENSGALG00000027916 19 0.882 - - - - - - - - - 0.882 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
58. TNFAIP3 ENSGALG00000013861 11 0.882 - - - - - - - - - 0.882 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
59. CLIC3 ENSGALG00000038789 233 0.881 - - - - - - - - - 0.881 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
60. PDPR ENSGALG00000002690 45 0.881 - - - - - - - 0.881 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
61. TMEM164 ENSGALG00000008076 734 0.88 - - - - 0.880 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
62. LARP4B ENSGALG00000006672 57 0.88 - - - - 0.880 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
63. MYCN ENSGALG00000016462 1930 0.879 - - - - - - - - - 0.879 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
64. NMBR ENSGALG00000013813 15 0.879 - - - - - - - - - 0.879 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
65. TNN ENSGALG00000004538 21 0.879 - - - - - - - - - 0.879 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
66. MUL1 ENSGALG00000042761 1312 0.879 - - - - 0.879 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
67. ZMYND10 ENSGALG00000035883 58 0.878 - - - - - - - - - 0.878 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
68. CPAMD8 ENSGALG00000003742 151 0.877 - - - - - - - 0.877 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
69. PLA1A ENSGALG00000014997 152 0.877 - - 0.877 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
70. TRAF3IP3 ENSGALG00000001373 11 0.877 - - 0.877 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
71. TRMT61A ENSGALG00000011522 14 0.876 - - - - - - - - - 0.876 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
72. KNDC1 ENSGALG00000007007 31 0.876 - - 0.876 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
73. PKD2 ENSGALG00000010921 55 0.876 - - - - - - - - - 0.876 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
74. TNFAIP2 ENSGALG00000011446 32 0.875 - - - - - - - - - 0.875 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
75. TRAK2 ENSGALG00000008370 46 0.875 - - - - - - - - - 0.875 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
76. ASTE1 ENSGALG00000036171 155 0.873 - - - - - - - 0.873 - - asteroid homolog 1 (Drosophila), transcript variant X3
77. SLC20A1 ENSGALG00000013740 40 0.873 - - - - - - - - - 0.873 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
78. ERN2 ENSGALG00000027592 186 0.872 - - - - 0.872 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
79. SLC7A2 ENSGALG00000013627 58 0.872 - - - - - - - - - 0.872 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
80. CEP89 ENSGALG00000004756 282 0.872 - - - - 0.872 - - - - - centrosomal protein 89 [Source:HGNC Symbol;Acc:HGNC:25907]
81. LAMP1 ENSGALG00000037697 247 0.869 - - - - - - - 0.869 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
82. TSPAN14 ENSGALG00000002414 69 0.869 - - - - - - - 0.869 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
83. DEAF1 ENSGALG00000034225 439 0.869 - - - - 0.869 - - - - - DEAF1, transcription factor [Source:NCBI gene;Acc:423017]
84. TBX5 ENSGALG00000008253 820 0.869 - - - - - - - - - 0.869 T-box 5 [Source:NCBI gene;Acc:373988]
85. SMEK1 SMEK1 95 0.869 - - - - - - - - - 0.869
86. ATXN1L ENSGALG00000028253 17 0.868 - - - - - 0.868 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
87. ENSGALG00000024018 ENSGALG00000024018 37 0.868 - - - - 0.868 - - - - -
88. ERRFI1 ENSGALG00000000535 83 0.867 - - - - - - - - - 0.867 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
89. SCN4B ENSGALG00000007409 22 0.867 - - 0.867 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
90. CACNA1D ENSGALG00000005332 34 0.867 - - 0.867 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
91. ENSGALG00000017589 ENSGALG00000017589 36 0.866 - - 0.866 - - - - - - -
92. SGIP1 ENSGALG00000011113 20 0.865 - - - - - - - 0.865 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
93. ENSGALG00000019896 ENSGALG00000019896 3 0.865 - - - - - - - 0.865 - -
94. EFHC2 ENSGALG00000016221 8 0.865 - - - - - 0.865 - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
95. ICMT ENSGALG00000024053 10 0.864 - - 0.864 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
96. INADL INADL 51 0.864 - - - - - - - - - 0.864
97. MAP3K21 ENSGALG00000011008 54 0.864 - - - - 0.864 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
98. FAM154B FAM154B 175 0.864 - - - - - - - - - 0.864
99. TMEM200B ENSGALG00000024318 117 0.863 - - - - - - - - - 0.863 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
100. WNK1 ENSGALG00000012992 67 0.863 - - 0.863 - - - - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]

There are 358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA