Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CRABP-I

Gene Name Gene ID Reads Annotation
CRABP-I ENSGALG00000003193 67258 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]











Genes with expression patterns similar to CRABP-I

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CRABP-I ENSGALG00000003193 67258 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
2. HES5 ENSGALG00000001141 6514 5.386 - - 0.902 0.933 0.808 0.968 - - 0.921 0.854 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
3. ENSGALG00000027002 ENSGALG00000027002 7570 5.09 - - 0.891 0.816 0.756 0.846 - - 0.888 0.893
4. PAX-6 PAX-6 2650 5.003 - - 0.846 0.838 0.763 0.832 - - 0.834 0.890
5. ENSGALG00000027373 ENSGALG00000027373 2129 4.392 - - 0.873 0.804 - 0.856 - - 0.916 0.943
6. PTPRZ1 ENSGALG00000040114 3410 4.236 - - 0.825 0.872 - 0.914 - - 0.739 0.886 protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
7. TAGLN3 ENSGALG00000015379 7865 4.227 - - 0.895 0.885 - 0.789 - - 0.831 0.827 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
8. HOXD4 ENSGALG00000023419 6073 3.722 - - 0.716 0.819 0.701 0.775 - - 0.711 - homeobox D4 [Source:NCBI gene;Acc:424139]
9. HES6 ENSGALG00000028415 4830 3.461 - - - 0.732 - 0.892 - - 0.874 0.963 hes family bHLH transcription factor 6
10. ZIC1 ENSGALG00000040532 6543 3.344 - - 0.870 0.826 - 0.915 - - 0.733 - Zic family member 1 [Source:NCBI gene;Acc:374103]
11. CERCAM ENSGALG00000004986 5158 3.334 - - 0.831 - - 0.943 - - 0.770 0.790 cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
12. CSPG5 ENSGALG00000032184 991 3.201 - - 0.788 0.911 - 0.789 - - 0.713 - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
13. PROCA1 668 3.183 - - 0.842 - - 0.846 - - 0.714 0.781 protein interacting with cyclin A1
14. LDHB ENSGALG00000035836 169726 3.172 - - 0.793 - - 0.875 - - 0.775 0.729 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
15. WSCD2 ENSGALG00000004849 477 3.17 - - 0.861 0.827 0.715 0.767 - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
16. MARCKSL1 ENSGALG00000032335 88728 3.159 - - 0.773 0.789 - 0.885 - - - 0.712 MARCKS like 1 [Source:NCBI gene;Acc:770764]
17. DLL1 ENSGALG00000011182 1613 2.606 - - - 0.857 - 0.873 - - - 0.876 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
18. OPTC ENSGALG00000003554 3698 2.561 - - 0.827 0.773 - 0.961 - - - - opticin [Source:NCBI gene;Acc:395130]
19. CHL1 ENSGALG00000037856 1565 2.519 - - - 0.811 - 0.877 - - - 0.831 cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
20. ENPP2 ENSGALG00000032746 6086 2.512 - - - - - 0.833 - - 0.828 0.851 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
21. ENSGALG00000022967 ENSGALG00000022967 240 2.434 - - 0.809 - - 0.759 - - - 0.866
22. SRGAP3 ENSGALG00000008378 4331 2.432 - - 0.777 - - 0.895 - - 0.760 - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
23. GNG10 ENSGALG00000015683 6905 2.428 - - 0.762 - 0.749 0.917 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
24. CRMP1B CRMP1B 18633 2.384 - - 0.788 0.823 - - - - - 0.773
25. IRX1 ENSGALG00000030991 1474 2.341 - - - - - 0.856 - - 0.739 0.746 iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
26. RTN1 ENSGALG00000012006 2438 2.321 - - 0.794 - 0.714 0.813 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
27. DRAXIN ENSGALG00000004631 3122 2.313 - - 0.752 0.748 - 0.813 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
28. NHLH1 ENSGALG00000025817 1617 2.283 - - 0.786 0.746 - - - - 0.751 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
29. FZD3 ENSGALG00000042308 3356 2.22 - - - - - 0.816 - - 0.701 0.703 frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
30. SOX10 ENSGALG00000012290 3942 2.206 - 0.712 - - - 0.757 - - - 0.737 SRY-box 10 [Source:NCBI gene;Acc:395573]
31. SALL1 ENSGALG00000039238 3740 2.186 - - 0.717 0.705 - - - - - 0.764 spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
32. LFNG ENSGALG00000038515 5178 1.695 - - 0.786 - - 0.909 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
33. NEFM ENSGALG00000000317 6992 1.685 - - - 0.798 - 0.887 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
34. LASP-2 LASP-2 4415 1.682 - - 0.770 - - 0.912 - - - -
35. CKB ENSGALG00000011511 2100 1.68 - - - - - 0.953 - - - 0.727 creatine kinase B [Source:NCBI gene;Acc:396248]
36. SLC35F1 ENSGALG00000029011 14728 1.666 - - - - - 0.881 - - - 0.785 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
37. MIF ENSGALG00000006326 109683 1.649 - - 0.887 - - 0.762 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
38. NPAS3 ENSGALG00000029022 1950 1.634 - - 0.780 - - 0.854 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
39. SLC1A3 ENSGALG00000003582 2283 1.595 - - - 0.770 - 0.825 - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
40. PRTG ENSGALG00000037336 34665 1.595 - - - 0.779 - 0.816 - - - - protogenin [Source:NCBI gene;Acc:415407]
41. NFASC ENSGALG00000031776 4264 1.594 - - - 0.827 - 0.767 - - - - neurofascin [Source:NCBI gene;Acc:419824]
42. CHGA ENSGALG00000010820 1028 1.58 - - - 0.810 - 0.770 - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
43. DCLK2 ENSGALG00000032386 2253 1.58 - - - - - 0.785 - - - 0.795 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
44. DENND5B 4077 1.574 - - 0.756 - - 0.818 - - - - DENN domain containing 5B, transcript variant X1
45. MOXD1 ENSGALG00000002911 8523 1.554 - - - - - 0.824 - 0.730 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
46. SOHO-1 ENSGALG00000015599 110 1.552 - - - - - - - - 0.757 0.795 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
47. NCAM1 ENSGALG00000007839 19929 1.552 - - - 0.801 - 0.751 - - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
48. TRABD2A ENSGALG00000026395 704 1.539 - - - - - 0.767 - - - 0.772 TraB domain containing 2A, transcript variant X3
49. HOXB-7 HOXB-7 2066 1.533 - - 0.733 0.800 - - - - - -
50. ACVR2B ENSGALG00000006158 8692 1.532 - - - - - 0.808 - - 0.724 - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
51. TSPAN13 ENSGALG00000027240 8999 1.531 - - - - - - - - 0.748 0.783 tetraspanin 13 [Source:NCBI gene;Acc:420595]
52. NRCAM ENSGALG00000009514 490 1.526 - - - - - 0.789 - - - 0.737 neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
53. BTBD17 ENSGALG00000023359 87 1.516 - - - - - 0.782 - - - 0.734 BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
54. NTN3 ENSGALG00000029072 1368 1.511 - - 0.808 0.703 - - - - - - netrin 1 [Source:NCBI gene;Acc:396387]
55. RGMA ENSGALG00000039173 12874 1.51 - - - 0.805 - - - - - 0.705 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
56. GDPD4 ENSGALG00000000690 824 1.503 - - - 0.750 - 0.753 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
57. LOC419390 ENSGALG00000001136 607 1.498 - - 0.779 - - 0.719 - - - - hairy and enhancer of split 5-like, transcript variant X1
58. RASSF2 ENSGALG00000030432 4822 1.495 - - 0.704 - - 0.791 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
59. LOC395159 ENSGALG00000010722 9417 1.487 - 0.720 - - - 0.767 - - - - Schwann cell-specific EGF-like repeat autocrine factor
60. TMSB10 TMSB10 518 1.472 - - 0.765 - - 0.707 - - - -
61. TSPAN3 ENSGALG00000002774 28811 1.463 - - 0.734 - - 0.729 - - - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
62. TUBB2B ENSGALG00000012821 41535 1.459 - - 0.729 - - - - - - 0.730 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
63. GADD45_1 GADD45_1 1433 1.452 - - - - - 0.724 - - - 0.728
64. GABRA3 ENSGALG00000007269 985 1.443 - - - 0.707 - 0.736 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
65. OTP ENSGALG00000026744 162 1.441 - - - - - - - - 0.715 0.726 orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
66. SYNPR ENSGALG00000007284 1368 1.438 - - - - - 0.709 - - - 0.729 synaptoporin [Source:NCBI gene;Acc:396359]
67. NOC3L ENSGALG00000035667 7441 0.934 - - - - - - - 0.934 - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
68. WDFY2 ENSGALG00000017019 2384 0.931 - - - - - - - 0.931 - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
69. MYL4 ENSGALG00000000585 16982 0.925 - - - - - 0.925 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
70. LIPG ENSGALG00000043734 2490 0.919 - - - - - 0.919 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
71. FGFR3 ENSGALG00000015708 16853 0.905 - - - - - 0.905 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
72. PAX3 ENSGALG00000030944 2987 0.898 - - - - - 0.898 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
73. FABP7 ENSGALG00000038933 6780 0.893 - - - - - 0.893 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
74. MRPS10 ENSGALG00000009890 9157 0.891 - - - - - - - 0.891 - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
75. FAM103A1 17380 0.879 - - - - - - - 0.879 - - family with sequence similarity 103 member A1, transcript variant X2
76. IMP4 ENSGALG00000029152 11669 0.871 - - - - - - - 0.871 - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
77. NSG1 ENSGALG00000015010 5829 0.868 - - - - - 0.868 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
78. COL14A1 ENSGALG00000037675 2652 0.867 - - - - - 0.867 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
79. ZBTB16 ENSGALG00000038540 5544 0.856 - - - - - 0.856 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
80. IRX2 ENSGALG00000013193 2170 0.845 - - - - - 0.845 - - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
81. HOXA9 ENSGALG00000028983 9298 0.845 - - - - - - - - 0.845 - homeobox A9 [Source:NCBI gene;Acc:396096]
82. VIP ENSGALG00000013604 153 0.841 - - - - - 0.841 - - - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
83. IMMT ENSGALG00000015783 25009 0.838 - - - - - - - 0.838 - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
84. ENO1 ENSGALG00000002377 251226 0.836 - - - - - 0.836 - - - - enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
85. NEFL ENSGALG00000000314 4883 0.833 - - - - - 0.833 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
86. PAX-7 PAX-7 3856 0.831 - - - - - 0.831 - - - -
87. WNT4 ENSGALG00000041708 1277 0.831 - - - - - 0.831 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
88. LRP2 ENSGALG00000010858 363 0.829 - - - - - 0.829 - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
89. TUBB2C TUBB2C 44249 0.828 - - - - - 0.828 - - - -
90. ASTN1 ENSGALG00000004472 855 0.813 - - - - - 0.813 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
91. DACH1 ENSGALG00000037015 5648 0.811 - - - - - 0.811 - - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
92. MAP2 ENSGALG00000002789 6597 0.806 - - - - - 0.806 - - - - microtubule associated protein 2, transcript variant X33
93. PRDM12 ENSGALG00000003895 35 0.801 - - - - - - - - - 0.801 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
94. FASN ENSGALG00000040896 17372 0.801 - - - - - 0.801 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
95. BMP7 ENSGALG00000007668 6645 0.8 - - - - - 0.800 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
96. HOXB2 ENSGALG00000025774 5280 0.799 - - - - - 0.799 - - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
97. ZIC3 ENSGALG00000031144 863 0.798 - - - - - 0.798 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
98. MURC 3759 0.795 - - - - - 0.795 - - - - muscle related coiled-coil protein
99. ALDOC ENSGALG00000026077 106910 0.793 - - - - - 0.793 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
100. ENSGALG00000013357 ENSGALG00000013357 2282 0.792 - - - - - 0.792 - - - -

There are 140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA