Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR936975.1

Gene Name Gene ID Reads Annotation
CR936975.1 ENSDARG00000096862 22










Genes with expression patterns similar to CR936975.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR936975.1 ENSDARG00000096862 22 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. si:ch211-195i24.1 si:ch211-195i24.1 10 1.868 - 1.000 - - - 0.868 - - -
3. si:dkeyp-82a1.2 ENSDARG00000094192 2 1.868 - 1.000 - - - 0.868 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
4. 5S_rRNA_15 5S_rRNA_15 9 1.857 - - - - - 0.868 - 0.989 -
5. limk1a ENSDARG00000103467 97 1.848 - 0.921 - - - 0.927 - - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
6. cspg5b ENSDARG00000099793 67 1.834 - 1.000 - - - 0.834 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
7. NARS2 ENSDARG00000098441 57 1.793 - 0.906 - - - - - 0.887 - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
8. hivep3a ENSDARG00000075928 17 1.792 - - 0.924 - - 0.868 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
9. pcdh8 ENSDARG00000006467 317 1.789 - 1.000 - - - 0.789 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
10. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1.787 - 1.000 - - - 0.787 - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
11. C25H12orf29 C25H12orf29 31 1.766 - 1.000 - - - 0.766 - - -
12. sst6 ENSDARG00000093804, ENSDARG00000116656 31 1.735 - - 0.918 - - 0.817 - - - somatostatin 6 [Source:ZFIN;Acc:ZDB-GENE-081022-199]
13. CABZ01117437.1 CABZ01117437.1 11 1.725 - 1.000 - - - 0.725 - - -
14. JAKMIP1 ENSDARG00000076090 55 1.688 - - - - - 0.868 - 0.820 - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
15. C6H3orf18 C6H3orf18 7 1.647 - - - 0.780 0.867 - - - -
16. si:ch73-83c10.2 si:ch73-83c10.2 22 1.632 - - 0.765 - 0.867 - - - -
17. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.625 - 0.862 - - - - - 0.763 - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
18. purg ENSDARG00000099187, ENSDARG00000114450 33 1.597 - 0.729 - - - 0.868 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
19. CR678040.1 CR678040.1 117 1.589 - 0.721 - - - 0.868 - - -
20. zgc:194621 ENSDARG00000074696 85 1.587 - - 0.831 - - - - 0.756 - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
21. HIST1H4J HIST1H4J 31 1.58 - - - - 0.712 0.868 - - -
22. grn1 ENSDARG00000089362 20 1.576 - 0.729 - - 0.847 - - - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
23. rasgrp3 ENSDARG00000077864, ENSDARG00000109559, ENSDARG00000116768 111 1.555 - 0.805 - - - - - 0.750 - RAS guanyl releasing protein 3 (calcium and DAG-regulated) [Source:ZFIN;Acc:ZDB-GENE-070424-82]
24. plaub ENSDARG00000039145 35 1.534 - 0.729 0.805 - - - - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
25. MSANTD2 ENSDARG00000079474 121 1.531 - 0.705 - - - 0.826 - - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
26. CU693480.1 CU693480.1 51 1.495 - 0.721 - - - - - 0.774 -
27. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
28. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
29. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
30. ROCK2_1 ROCK2_1 47 1 - 1.000 - - - - - - -
31. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - 1.000 - - - - - - -
32. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - 1.000 - - - - - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
33. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - 1.000 - - - - - - -
34. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
35. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
36. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
37. adcyap1a ENSDARG00000004015 67 1 - 1.000 - - - - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
38. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1 - 1.000 - - - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
39. CR381673.2 ENSDARG00000103241 7 1 - 1.000 - - - - - - -
40. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
41. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
42. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
43. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
44. TNS3_1 TNS3_1 8 1 - 1.000 - - - - - - -
45. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
46. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
47. CABZ01079979.1 CABZ01079979.1 1 1 - 1.000 - - - - - - -
48. elk4 ENSDARG00000077092 19 1 - 1.000 - - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
49. exoc8 ENSDARG00000063211 35 1 - 1.000 - - - - - - - exocyst complex component 8 [Source:ZFIN;Acc:ZDB-GENE-070410-60]
50. caps2 ENSDARG00000058486 4 1 - 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
51. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
52. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
53. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
54. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
55. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
56. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
57. prrt1 ENSDARG00000062208 368 1 - 1.000 - - - - - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
58. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
59. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
60. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
61. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
62. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1 - 1.000 - - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
63. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
64. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
65. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
66. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
67. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
68. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
69. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
70. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
71. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
72. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
73. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
74. st8sia1 ENSDARG00000098221 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
75. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
76. ATXN1 ATXN1 12 1 - 1.000 - - - - - - -
77. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
78. SYNDIG1 ENSDARG00000100751 165 1 - 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
79. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
80. mlc1 ENSDARG00000063026 29 1 - 1.000 - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
81. si:dkey-79f11.1 si:dkey-79f11.1 91 1 - 1.000 - - - - - - -
82. kcnn1a ENSDARG00000091306 95 1 - 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
83. HIST1H4J_2 HIST1H4J_2 12 1 - 1.000 - - - - - - -
84. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
85. st6galnac1.1 ENSDARG00000043814 95 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
86. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
87. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
88. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
89. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
90. gabpb1 ENSDARG00000023659 26 1 - 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
91. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
92. CDCP1 ENSDARG00000110186 0 1 - 1.000 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
93. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - 1.000 - - - - - - -
94. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
95. CU459094.1 ENSDARG00000110517 17 1 - 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
96. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
97. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
98. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
99. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
100. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]

There are 867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA