Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR589947.1

Gene Name Gene ID Reads Annotation
CR589947.1 ENSDARG00000079269 5










Genes with expression patterns similar to CR589947.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR589947.1 ENSDARG00000079269 5 4 - - 1.000 - 1.000 - 1.000 1.000 -
2. BX324198.1 BX324198.1 12 2 - - 1.000 - - - 1.000 - -
3. PLEKHA1 PLEKHA1 5 1.999 - - 1.000 - 0.999 - - - -
4. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.894 - - - - 0.938 - 0.956 - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
5. CU694319.1 CU694319.1 72 1.782 - - - - 0.821 - 0.961 - -
6. marco ENSDARG00000059294 17 1.747 - - 1.000 - - - 0.747 - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
7. chst12b ENSDARG00000077198, ENSDARG00000094981 15 1.729 - - - - - - 0.785 0.944 - carbohydrate (chondroitin 4) sulfotransferase 12b [Source:ZFIN;Acc:ZDB-GENE-090312-144]
8. dyx1c1 dyx1c1 36 1.684 - - - - - - 0.927 0.757 -
9. si:dkey-26g8.10 si:dkey-26g8.10 100 1.631 - - - - 0.883 - 0.748 - -
10. SNORA73_2 SNORA73_2 31 1.606 - - - - 0.741 - 0.865 - -
11. crym ENSDARG00000062817 171 1.506 - - - - 0.748 - 0.758 - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
12. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
13. LOXL2 LOXL2 2 1 - - 1.000 - - - - - -
14. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
15. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
16. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
17. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
18. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
19. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
20. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
21. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
22. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
23. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
24. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
25. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
26. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
27. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
28. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
29. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
30. snoU109 snoU109 1 1 - - - - - - - 1.000 -
31. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
32. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
33. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
34. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
35. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
36. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
37. HCN2 HCN2 0 1 - - 1.000 - - - - - -
38. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
39. KHNYN ENSDARG00000092488 10 1 - - - - 1.000 - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
40. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
41. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
42. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
43. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - 1.000 - - - - - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
44. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
45. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
46. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - - - - - 1.000 - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
47. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
48. pnp4b ENSDARG00000029230 6 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
49. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
50. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
51. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
52. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
53. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
54. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
55. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
56. fn3krp ENSDARG00000098208 4 1 - - - - 1.000 - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
57. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
58. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
59. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
60. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
61. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
62. si:dkey-230i18.1 si:dkey-230i18.1 3 1 - - 1.000 - - - - - -
63. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
64. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
65. ZBED1_4 ZBED1_4 2 1 - - 1.000 - - - - - -
66. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
67. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
68. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
69. RORC ENSDARG00000087195 9 1 - - 1.000 - - - - - - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
70. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
71. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
72. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
73. TRAF2 TRAF2 13 1 - - 1.000 - - - - - -
74. cyp39a1 ENSDARG00000017982 4 1 - - - - - - - 1.000 - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
75. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - 1.000 - - - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
76. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
77. BRSK2_2 BRSK2_2 3 1 - - 1.000 - - - - - -
78. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
79. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
80. gper gper 4 1 - - - - - - 1.000 - -
81. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
82. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
83. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
84. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
85. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
86. zgc:112234 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 0 1 - - 1.000 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
87. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
88. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
89. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
90. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
91. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
92. fgf10b ENSDARG00000100475 17 1 - - 1.000 - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
93. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - - - - - 1.000 -
94. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
95. VSIG10L ENSDARG00000089237 12 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
96. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
97. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - 1.000 - -
98. irf4a ENSDARG00000006560 4 1 - - - - - - - 1.000 - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
99. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
100. CDR2_1 CDR2_1 8 1 - - - - - - - 1.000 -

There are 677 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA