Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR548630.1

Gene Name Gene ID Reads Annotation
CR548630.1 CR548630.1 3301










Genes with expression patterns similar to CR548630.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR548630.1 CR548630.1 3301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ldb1a ENSDARG00000010137 3035 3.351 - 0.887 0.951 0.795 - - - - 0.718 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
3. usp1 ENSDARG00000056414 1816 3.105 0.738 0.923 0.710 0.734 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
4. lgi1a ENSDARG00000020493 1218 2.809 - - 0.972 - 0.986 0.851 - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
5. rhogc ENSDARG00000028401 2671 2.716 - - 0.975 0.772 0.969 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
6. smn1 ENSDARG00000018494 1024 2.69 - 0.901 - 0.809 0.980 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
7. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.659 - - 0.981 0.819 - 0.859 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
8. larp7 ENSDARG00000017315 1194 2.628 - - - 0.907 0.983 0.738 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
9. marcksa ENSDARG00000004049 2518 2.601 - - - 0.855 0.934 0.812 - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
10. vdac1 ENSDARG00000045132 8051 2.574 - 0.880 0.844 - - 0.850 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. tuba1c ENSDARG00000055216 8384 2.482 - - 0.920 - - 0.814 - - 0.748 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
12. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.477 - 0.797 - 0.894 - 0.786 - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
13. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.459 - 0.963 - - 0.787 - - - 0.709 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
14. dbx1a ENSDARG00000086393 3161 2.442 - - 0.955 - 0.700 0.787 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
15. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 2.429 - - 0.958 0.720 - 0.751 - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
16. tmem35 ENSDARG00000052567 5685 2.375 - - - - 0.720 0.886 - - 0.769 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
17. ephb3a ENSDARG00000031548 1872 2.327 - - - 0.720 0.715 0.892 - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
18. tox ENSDARG00000032317 9126 2.308 - - 0.853 - - 0.700 - - 0.755 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
19. ndrg4 ENSDARG00000103937 1234 2.282 - - - 0.801 - 0.759 - - 0.722 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
20. gipc1 ENSDARG00000104483 2913 2.255 0.736 - - 0.805 - 0.714 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
21. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.976 - - 0.976 - - - 1.000 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
22. vbp1 ENSDARG00000030241 10619 1.959 - - - - 0.960 - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
23. fut8 fut8 652 1.952 - - 0.971 - 0.981 - - - -
24. paxip1 ENSDARG00000005606 1417 1.942 - - 0.969 - 0.973 - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
25. cenpf ENSDARG00000055133 5267 1.905 - - 0.967 - 0.938 - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
26. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1.898 - - - - 0.898 - 1.000 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
27. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.885 - - 0.931 - 0.954 - - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
28. vrk1 ENSDARG00000018006 1759 1.883 - - 0.968 0.915 - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
29. atp5g3a 9539 1.882 - - 0.949 - 0.933 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
30. loxl2b ENSDARG00000044074 1919 1.879 - 0.907 - - 0.972 - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
31. wdhd1 ENSDARG00000015998 775 1.868 - - 0.976 0.892 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
32. pank1b ENSDARG00000010098 3202 1.868 - - 0.973 - 0.895 - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
33. mcts1 ENSDARG00000025972 4662 1.865 - - 0.929 - 0.936 - - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
34. cbfa2t2 ENSDARG00000074337 4323 1.861 - - 0.956 - 0.905 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
35. ube2v1 ENSDARG00000041875 5739 1.851 - - 0.941 - 0.910 - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
36. aldh16a1 ENSDARG00000037935 617 1.845 - 0.864 - - 0.981 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
37. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.839 - - - - 0.969 0.870 - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
38. smo ENSDARG00000002952 6411 1.836 - - - 0.866 0.970 - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
39. TMEM185A TMEM185A 5505 1.83 - - 0.957 0.873 - - - - -
40. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.83 - - 0.966 0.864 - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
41. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.824 - - - - 0.963 0.861 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
42. setdb1a ENSDARG00000041243 1952 1.824 - 0.854 0.970 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
43. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.823 - - 0.965 0.858 - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
44. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.822 - 0.854 0.968 - - - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
45. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.821 - - 0.920 0.901 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
46. odz4 odz4 822 1.813 - - - - 0.984 0.829 - - -
47. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.81 - - 0.960 0.850 - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
48. zic5 ENSDARG00000016022 1034 1.807 - 0.833 - - 0.974 - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
49. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.805 - - 0.970 - - 0.835 - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
50. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.804 - - 0.941 0.863 - - - - -
51. inip ENSDARG00000028523 1925 1.804 - - 0.977 0.827 - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
52. tdg tdg 3269 1.798 - - 0.954 0.844 - - - - -
53. ZBTB16 ZBTB16 3385 1.798 - 0.848 0.950 - - - - - -
54. nol9 ENSDARG00000077751 2471 1.793 - 0.836 - - 0.957 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
55. onecutl ENSDARG00000040253 2143 1.787 - - 0.958 - - 0.829 - - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
56. UBE2QL1 ENSDARG00000079276 3474 1.785 - - - - 0.979 0.806 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
57. msi1 ENSDARG00000010710 2634 1.784 - - - - 0.882 0.902 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
58. srgap1 srgap1 2320 1.781 - - - - 0.973 0.808 - - -
59. nefma ENSDARG00000021351 790 1.781 - - - - 0.985 0.796 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
60. tdrd3 ENSDARG00000025421 633 1.779 - 0.883 - 0.896 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
61. mb21d2a mb21d2a 421 1.774 - - - 0.900 - 0.874 - - -
62. mrps33 ENSDARG00000020015 3551 1.774 - - - 0.809 0.965 - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
63. apc ENSDARG00000058868 2605 1.774 - - - - 0.971 0.803 - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
64. CDK5R1 CDK5R1 562 1.772 - - - 0.877 - 0.895 - - -
65. atp6v0cb ENSDARG00000036577 3472 1.771 - - - - 0.958 0.813 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
66. calm1a ENSDARG00000021811 4791 1.77 - - - - 0.872 0.898 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
67. scube2 ENSDARG00000037362 2833 1.767 - - - - 0.928 0.839 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
68. epb41l4a ENSDARG00000040087 1013 1.758 - 0.881 - 0.877 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
69. NHSL1 NHSL1 182 1.758 - - - 0.914 - 0.844 - - -
70. SPTBN4_1 ENSDARG00000092624 473 1.757 - - - 0.899 - 0.858 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
71. nuf2 ENSDARG00000034624 2252 1.755 - 0.798 - - 0.957 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
72. bbs4 ENSDARG00000063522 247 1.754 - 0.863 - 0.891 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
73. BX005008.2 BX005008.2 708 1.75 - 0.763 - - 0.987 - - - -
74. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.747 - - - 0.787 0.960 - - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
75. dbx2 2971 1.747 - - 0.939 - - 0.808 - - - developing brain homeobox 2
76. FBXO33 ENSDARG00000075400 1164 1.745 - 0.766 - - 0.979 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
77. syngr3a ENSDARG00000014871 405 1.745 - - - 0.891 - 0.854 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
78. znf292a ENSDARG00000016763 2253 1.745 - - 0.938 - - 0.807 - - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
79. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.744 - 0.762 - - 0.982 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
80. katnbl1 ENSDARG00000042522 1086 1.74 - - - 0.756 0.984 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
81. TUBB8P7_1 TUBB8P7_1 2722 1.74 - - - - 0.967 0.773 - - -
82. gatad2ab ENSDARG00000006192 2461 1.739 - - - 0.793 0.946 - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
83. lrrfip2 ENSDARG00000010400 2633 1.738 - 0.856 - 0.882 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
84. atxn7l3 ENSDARG00000029331 531 1.736 - - - 0.750 0.986 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
85. ywhae2 ENSDARG00000017014 5105 1.734 - 0.818 0.916 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
86. nrarpb ENSDARG00000018958 6225 1.732 - - - - 0.905 0.827 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
87. zdhhc6 ENSDARG00000075721 1494 1.73 - 0.867 - 0.863 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
88. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.73 - - - 0.811 - 0.919 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
89. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.729 - - - - 0.974 0.755 - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
90. gdi1 ENSDARG00000056122 4106 1.726 - - 0.962 - - 0.764 - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
91. tab1 ENSDARG00000036613 445 1.723 - 0.738 - - 0.985 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
92. rpl35 ENSDARG00000018334 69583 1.72 - - - - 0.809 - 0.911 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
93. map7d3 ENSDARG00000060771 1739 1.718 - - - 0.718 - - 1.000 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
94. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.718 - - - 0.803 - 0.915 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
95. PARD3B PARD3B 401 1.718 - 0.816 - 0.902 - - - - -
96. ss18 ENSDARG00000002970 2618 1.716 - - 0.963 - - 0.753 - - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
97. zdhhc17 ENSDARG00000070441 1073 1.712 - 0.816 - 0.896 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
98. RAB39B RAB39B 482 1.708 - - 0.971 - - 0.737 - - -
99. wu:fb17g07 wu:fb17g07 10567 1.708 - - 0.950 - - 0.758 - - -
100. ctnnbip1 ENSDARG00000038954 2519 1.707 - - 0.976 - - 0.731 - - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]

There are 2196 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA