Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR407588.1

Gene Name Gene ID Reads Annotation
CR407588.1 ENSDARG00000115460 9 SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]










Genes with expression patterns similar to CR407588.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR407588.1 ENSDARG00000115460 9 6 - - - 1.000 1.000 1.000 1.000 1.000 1.000 SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
2. dand5 ENSDARG00000036471 8 2 - - - - - 1.000 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
3. si:ch211-67e16.10 si:ch211-67e16.10 2 2 - - - - - 1.000 1.000 - -
4. pnp4b ENSDARG00000029230 6 2 - - - - - 1.000 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
5. CR759907.3 CR759907.3 3 1.987 - - - - - - 1.000 - 0.987
6. si:dkey-105h11.2 13 1.85 - - - - - 1.000 0.850 - - si:dkey-105h11.2
7. C5H9orf117 C5H9orf117 88 1.824 - - - - - 0.916 0.908 - -
8. slc9a3.1 ENSDARG00000058498 46 1.824 - - - - - 0.843 0.981 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
9. MUC5B_1 MUC5B_1 7 1.813 - - - 0.813 - - 1.000 - -
10. zgc:173593 ENSDARG00000077360 10 1.812 - - - - - 0.812 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
11. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.799 - - - - - 0.843 0.956 - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
12. si:ch73-95a24.1 si:ch73-95a24.1 11 1.787 - - - - - 0.787 1.000 - -
13. si:dkey-176f19.7 ENSDARG00000103348 10 1.777 - - - - - 0.777 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
14. si:ch73-222h13.1 ENSDARG00000087107 16 1.771 - - - - - 0.921 0.850 - - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
15. si:ch211-113a14.17 15 1.769 - - - - 0.769 - 1.000 - - si:ch211-113a14.17
16. CABZ01055343.1 CABZ01055343.1 12 1.769 - - - - 0.769 - 1.000 - -
17. ubxn10 ENSDARG00000052535 24 1.766 - - - - - 1.000 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
18. zgc:92594 ENSDARG00000089517 83 1.756 - - - - - 0.959 0.797 - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
19. OTOG ENSDARG00000068460 60 1.724 - - - - - 0.859 0.865 - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
20. si:dkey-193i10.3 si:dkey-193i10.3 70 1.71 - - - - - - 0.820 - 0.890
21. ADAD1 ENSDARG00000089181 9 1.709 - - - - - 0.709 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
22. vrk2 ENSDARG00000021547 45 1.702 - - - - - 0.954 0.748 - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
23. IQUB ENSDARG00000061899 91 1.679 - - - - - 0.778 0.901 - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
24. zgc:103759 ENSDARG00000019503 58 1.679 - - - - - 0.977 0.702 - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
25. lrrc9 ENSDARG00000054352 25 1.669 - - - - 0.723 0.946 - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
26. si:ch73-369o7.3 si:ch73-369o7.3 20 1.591 - - - - - 0.843 0.748 - -
27. zgc:158417 ENSDARG00000101671 46 1.566 - - - - 0.726 0.840 - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
28. morn2 ENSDARG00000071360 44 1.562 - - - - - 0.798 0.764 - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
29. ARHGAP17 ARHGAP17 29 1.559 - - - - - 0.795 0.764 - -
30. f2rl1.1 ENSDARG00000068856 47 1.499 - - - - - - - 0.731 0.768 coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
31. SNORA38 SNORA38 574 1.487 - - - - - 0.749 0.738 - -
32. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.48 - - - - - - 0.740 - 0.740 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
33. CABZ01074181.1 CABZ01074181.1 396 1.476 - - - - - - 0.772 - 0.704
34. tyw3 ENSDARG00000038222 385 1.423 - - - - - 0.715 0.708 - - tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-355]
35. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
36. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
37. CSF3 CSF3 4 1 - - - - - - - - 1.000
38. MPPED1 ENSDARG00000088181 117 1 - - - - - 1.000 - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
39. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
40. LAMA3 ENSDARG00000071462 5 1 - - - - - - 1.000 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
41. TNIP2 ENSDARG00000074501 35 1 - - - - - 1.000 - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
42. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
43. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - 1.000 - -
44. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
45. ankrd37 ENSDARG00000056376 131 1 - - - - - - 1.000 - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
46. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
47. zgc:66432 zgc:66432 16 1 - - - - - 1.000 - - -
48. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
49. PPHLN1 ENSDARG00000045692 4 1 - - - - - - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
50. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - - - - 1.000 - - -
51. rprma ENSDARG00000053383 12 1 - - - - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
52. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
53. siglec15l ENSDARG00000076132 2 1 - - - - - - - - 1.000 sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
54. CABZ01045617.2 CABZ01045617.2 13 1 - - - - - 1.000 - - -
55. DGKG ENSDARG00000062696 1 1 - - - - - - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
56. klc4_1 ENSDARG00000086985 22 1 - - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
57. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
58. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
59. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
60. zgc:174153 ENSDARG00000079376 12007 1 - - - - - - 1.000 - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
61. coch ENSDARG00000024032 7 1 - - - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
62. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
63. zgc:162946 zgc:162946 74 1 - - - - - 1.000 - - -
64. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
65. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
66. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
67. gda ENSDARG00000002986 9 1 - - - - - 1.000 - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
68. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - - - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
69. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
70. SYCP2L 3 1 - - - - - 1.000 - - - synaptonemal complex protein 2-like, transcript variant X3
71. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
72. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
73. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
74. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
75. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
76. ptger4a ENSDARG00000059236 13 1 - - - - - 1.000 - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
77. agmat ENSDARG00000059700 9 1 - - - - - - - - 1.000 agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
78. ttll2 ENSDARG00000077853 9 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
79. smtna ENSDARG00000074652 6 1 - - - - - - - - 1.000 smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
80. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - - - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
81. UHRF2 UHRF2 1 1 - - - - - - - - 1.000
82. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
83. U6_27 U6_27 1 1 - - - - - - 1.000 - -
84. inpp5jb ENSDARG00000093359 4 1 - - - - - 1.000 - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
85. CD37 ENSDARG00000075515, ENSDARG00000111538 11 1 - - - - - 1.000 - - - CD37 molecule [Source:ZFIN;Acc:ZDB-GENE-070820-17]
86. ZNF337_23 ZNF337_23 39 1 - - - - - - 1.000 - -
87. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
88. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
89. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
90. si:dkey-27n6.5 23 1 - - - - - - 1.000 - - si:dkey-27n6.5
91. cpa2 ENSDARG00000010146 28 1 - - - - - - - - 1.000 carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
92. myo7aa ENSDARG00000099871 23 1 - - - - - - 1.000 - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
93. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
94. CR589947.1 ENSDARG00000079269 5 1 - - - - - - 1.000 - -
95. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
96. pde6g 8 1 - - - - - 1.000 - - - phosphodiesterase 6G, cGMP-specific, rod, gamma
97. mpp4a ENSDARG00000058222 2 1 - - - - - - - - 1.000 membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]
98. CLCN2 CLCN2 8 1 - - - - - - 1.000 - -
99. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
100. RGS14 RGS14 15 1 - - - - - - 1.000 - -

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA