Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR407588.1

Gene Name Gene ID Reads Annotation
CR407588.1 ENSDARG00000115460 9 SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]










Genes with expression patterns similar to CR407588.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR407588.1 ENSDARG00000115460 9 6 - - - 1.000 1.000 1.000 1.000 1.000 1.000 SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
2. dand5 ENSDARG00000036471 8 2 - - - - - 1.000 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
3. si:ch211-67e16.10 si:ch211-67e16.10 2 2 - - - - - 1.000 1.000 - -
4. pnp4b ENSDARG00000029230 6 2 - - - - - 1.000 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
5. CR759907.3 CR759907.3 3 1.987 - - - - - - 1.000 - 0.987
6. si:dkey-105h11.2 13 1.85 - - - - - 1.000 0.850 - - si:dkey-105h11.2
7. C5H9orf117 C5H9orf117 88 1.824 - - - - - 0.916 0.908 - -
8. slc9a3.1 ENSDARG00000058498 46 1.824 - - - - - 0.843 0.981 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
9. MUC5B_1 MUC5B_1 7 1.813 - - - 0.813 - - 1.000 - -
10. zgc:173593 ENSDARG00000077360 10 1.812 - - - - - 0.812 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
11. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.799 - - - - - 0.843 0.956 - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
12. si:ch73-95a24.1 si:ch73-95a24.1 11 1.787 - - - - - 0.787 1.000 - -
13. si:dkey-176f19.7 ENSDARG00000103348 10 1.777 - - - - - 0.777 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
14. si:ch73-222h13.1 ENSDARG00000087107 16 1.771 - - - - - 0.921 0.850 - - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
15. si:ch211-113a14.17 15 1.769 - - - - 0.769 - 1.000 - - si:ch211-113a14.17
16. CABZ01055343.1 CABZ01055343.1 12 1.769 - - - - 0.769 - 1.000 - -
17. ubxn10 ENSDARG00000052535 24 1.766 - - - - - 1.000 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
18. zgc:92594 ENSDARG00000089517 83 1.756 - - - - - 0.959 0.797 - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
19. OTOG ENSDARG00000068460 60 1.724 - - - - - 0.859 0.865 - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
20. si:dkey-193i10.3 si:dkey-193i10.3 70 1.71 - - - - - - 0.820 - 0.890
21. ADAD1 ENSDARG00000089181 9 1.709 - - - - - 0.709 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
22. vrk2 ENSDARG00000021547 45 1.702 - - - - - 0.954 0.748 - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
23. IQUB ENSDARG00000061899 91 1.679 - - - - - 0.778 0.901 - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
24. zgc:103759 ENSDARG00000019503 58 1.679 - - - - - 0.977 0.702 - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
25. lrrc9 ENSDARG00000054352 25 1.669 - - - - 0.723 0.946 - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
26. si:ch73-369o7.3 si:ch73-369o7.3 20 1.591 - - - - - 0.843 0.748 - -
27. zgc:158417 ENSDARG00000101671 46 1.566 - - - - 0.726 0.840 - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
28. morn2 ENSDARG00000071360 44 1.562 - - - - - 0.798 0.764 - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
29. ARHGAP17 ARHGAP17 29 1.559 - - - - - 0.795 0.764 - -
30. f2rl1.1 ENSDARG00000068856 47 1.499 - - - - - - - 0.731 0.768 coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
31. SNORA38 SNORA38 574 1.487 - - - - - 0.749 0.738 - -
32. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.48 - - - - - - 0.740 - 0.740 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
33. CABZ01074181.1 CABZ01074181.1 396 1.476 - - - - - - 0.772 - 0.704
34. tyw3 ENSDARG00000038222 385 1.423 - - - - - 0.715 0.708 - - tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-355]
35. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 - - - - - 1.000 - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
36. myo7aa ENSDARG00000099871 23 1 - - - - - - 1.000 - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
37. SOX8 SOX8 22 1 - - - - - - 1.000 - -
38. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
39. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
40. ADM ADM 122 1 - - - - - 1.000 - - -
41. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
42. gpr158 gpr158 52 1 - - - - - - 1.000 - -
43. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
44. zgc:162946 zgc:162946 74 1 - - - - - 1.000 - - -
45. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
46. fam178a fam178a 29 1 - - - - - 1.000 - - -
47. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
48. gda ENSDARG00000002986 9 1 - - - - - 1.000 - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
49. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
50. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
51. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
52. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - - - - 1.000 - - -
53. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
54. coch ENSDARG00000024032 7 1 - - - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
55. si:ch73-24k9.2 ENSDARG00000078912 2 1 - - - - - 1.000 - - - si:ch73-24k9.2 [Source:ZFIN;Acc:ZDB-GENE-121214-29]
56. tmem244 ENSDARG00000043847 3 1 - - - - - 1.000 - - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
57. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - 1.000 - -
58. l3mbtl1a ENSDARG00000014828 119 1 - - - - - 1.000 - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
59. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
60. CSF3 CSF3 4 1 - - - - - - - - 1.000
61. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
62. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
63. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
64. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
65. itgb8 ENSDARG00000028222 2 1 - - - - - - - - 1.000 integrin, beta 8 [Source:ZFIN;Acc:ZDB-GENE-071213-3]
66. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
67. gper gper 4 1 - - - - - - 1.000 - -
68. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
69. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
70. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - - - 1.000 - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
71. mgat3 mgat3 195 1 - - - - - - 1.000 - -
72. taar19d ENSDARG00000115081 2 1 - - - - - - 1.000 - - trace amine associated receptor 19d [Source:ZFIN;Acc:ZDB-GENE-060413-18]
73. si:dkey-211g8.6 ENSDARG00000063088 19 1 - - - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
74. si:ch211-213i16.4 8 1 - - - - - - - - 1.000 si:ch211-213i16.4, transcript variant X1
75. BX324215.2 BX324215.2 2 1 - - - - - 1.000 - - -
76. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
77. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
78. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
79. EDN3 14 1 - - - - - - 1.000 - - endothelin 3
80. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
81. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
82. CU855711.1 ENSDARG00000088643 6 1 - - - - - 1.000 - - - legumain-like [Source:NCBI gene;Acc:108191752]
83. agmat ENSDARG00000059700 9 1 - - - - - - - - 1.000 agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
84. ccdc42b ccdc42b 18 1 - - - - - 1.000 - - -
85. si:ch211-250m6.8 si:ch211-250m6.8 51 1 - - - - - - 1.000 - -
86. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
87. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - 1.000 - - -
88. LAMA3 ENSDARG00000071462 5 1 - - - - - - 1.000 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
89. TRIM14_8 TRIM14_8 5 1 - - - - - 1.000 - - -
90. mpp4a ENSDARG00000058222 2 1 - - - - - - - - 1.000 membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]
91. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
92. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
93. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1 - - - - - 1.000 - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
94. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
95. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
96. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
97. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
98. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
99. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
100. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - - - - - 1.000 - - -

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA