Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR388416.3

Gene Name Gene ID Reads Annotation
CR388416.3 CR388416.3 1










Genes with expression patterns similar to CR388416.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR388416.3 CR388416.3 1 2 - - - - - - 1.000 - 1.000
2. NUGGC NUGGC 9 2 - - - - - - 1.000 - 1.000
3. si:ch211-131e11.14 si:ch211-131e11.14 7 2 - - - - - - 1.000 - 1.000
4. BX511182.1 BX511182.1 8 1.718 - - - - - - 0.718 - 1.000
5. si:dkey-242e21.3 ENSDARG00000075723 77 1.717 - - - - - - 0.850 - 0.867 si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
6. rx3 ENSDARG00000052893 43 1.711 - - - - - - 1.000 - 0.711 retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
7. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
8. ATG7 ENSDARG00000102893 1 1 - - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
9. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
10. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
11. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
12. htr2a htr2a 1 1 - - - - - - - - 1.000
13. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
14. si:dkeyp-70f9.7 ENSDARG00000042663 1 1 - - - - - - 1.000 - - si:dkeyp-70f9.7 [Source:ZFIN;Acc:ZDB-GENE-070705-550]
15. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
16. klc4_1 ENSDARG00000086985 22 1 - - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
17. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
18. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
19. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
20. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
21. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
22. dand5 ENSDARG00000036471 8 1 - - - - - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
23. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
24. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
25. ZNF337_23 ZNF337_23 39 1 - - - - - - 1.000 - -
26. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
27. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - 1.000 - -
28. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
29. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
30. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
31. AL929220.1 ENSDARG00000103323 14 1 - - - - - - 1.000 - -
32. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
33. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]
34. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
35. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
36. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
37. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - - - 1.000 - -
38. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
39. rprma ENSDARG00000053383 12 1 - - - - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
40. SNORD52 SNORD52 23 1 - - - - - - 1.000 - -
41. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
42. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
43. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
44. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
45. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
46. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - - - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
47. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
48. aox1 aox1 14 1 - - - - - - 1.000 - -
49. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
50. zgc:173593 ENSDARG00000077360 10 1 - - - - - - 1.000 - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
51. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
52. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - - - 1.000 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
53. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
54. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
55. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
56. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
57. efhb ENSDARG00000069703 9 1 - - - - - - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
58. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
59. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
60. CR589947.1 ENSDARG00000079269 5 1 - - - - - - 1.000 - -
61. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
62. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
63. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
64. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
65. CR352256.1 CR352256.1 3 1 - - - - - - - - 1.000
66. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
67. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
68. lrit1a ENSDARG00000019179 9 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
69. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
70. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
71. C12H17orf70 C12H17orf70 25 1 - - - - - - 1.000 - -
72. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
73. PPHLN1 ENSDARG00000045692 4 1 - - - - - - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
74. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
75. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
76. CR381673.2 ENSDARG00000103241 7 1 - - - - - - 1.000 - -
77. slc34a1b ENSDARG00000054658 1 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
78. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
79. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
80. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
81. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
82. cyp7a1a cyp7a1a 1 1 - - - - - - 1.000 - -
83. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
84. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
85. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
86. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
87. SP5 SP5 8 1 - - - - - - - - 1.000
88. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
89. sumo2a ENSDARG00000104390 4 1 - - - - - - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
90. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
91. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
92. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
93. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
94. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
95. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
96. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
97. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
98. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
99. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
100. EDN3 14 1 - - - - - - 1.000 - - endothelin 3

There are 550 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA