Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR388231.3

Gene Name Gene ID Reads Annotation
CR388231.3 ENSDARG00000105601 2404










Genes with expression patterns similar to CR388231.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR388231.3 ENSDARG00000105601 2404 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. pak2b ENSDARG00000018476 4331 3.032 - 0.775 - - - 0.773 0.759 - 0.725 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
3. plcg1 ENSDARG00000038442 5324 2.365 - - 0.756 - - 0.751 - 0.858 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
4. PPP1R8 PPP1R8 1897 2.356 - - 0.789 - - - - 0.848 0.719
5. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.346 - - - - - 0.815 0.704 0.827 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
6. sae1 ENSDARG00000010487 2028 2.321 - 0.740 - - - 0.757 - 0.824 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
7. acin1b ENSDARG00000026842 3806 2.311 - 0.781 0.782 - - 0.748 - - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
8. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 2.295 - 0.723 - - - 0.721 - 0.851 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
9. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.267 - 0.755 - - - - 0.752 - 0.760 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
10. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 2.242 0.728 0.791 - - - 0.723 - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
11. nrarpb ENSDARG00000018958 6225 2.218 - 0.707 - - - 0.766 - - 0.745 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
12. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 2.191 - 0.746 0.706 - - - 0.739 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
13. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.166 - - - - - 0.742 0.702 0.722 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
14. apex1 ENSDARG00000045843 6345 2.144 - 0.712 - - - - 0.709 0.723 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
15. kctd6a ENSDARG00000043095 480 1.764 - - - - - 0.841 - 0.923 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
16. bub1bb ENSDARG00000074927 1667 1.738 - - 0.818 - - - - 0.920 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
17. ap1s1 ENSDARG00000056803 3854 1.737 - - 0.837 - - - - 0.900 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
18. CABZ01073174.1 CABZ01073174.1 581 1.704 - - 0.787 - - - - 0.917 -
19. CR942805.1 CR942805.1 94 1.697 - - 0.787 - - - - 0.910 -
20. FAM171A2 FAM171A2 707 1.693 - - - - - - - 0.942 0.751
21. ttll7 ENSDARG00000062973 519 1.691 - - - - - 0.768 - 0.923 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
22. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.689 - 0.777 - - - - - 0.912 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
23. pelo ENSDARG00000055477 1927 1.686 - - 0.800 - - - - 0.886 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
24. tmem2 2572 1.68 - - - - - 0.801 - 0.879 - transmembrane protein 2, transcript variant X1
25. usp45 ENSDARG00000075013 227 1.678 0.758 - - - - - - 0.920 - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
26. zic5 ENSDARG00000016022 1034 1.673 - - - - - 0.808 - 0.865 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
27. scg2b ENSDARG00000038574 345 1.66 - - - - - 0.769 - 0.891 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
28. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.657 - - - - - 0.743 - 0.914 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
29. prmt1 ENSDARG00000010246 11311 1.657 - 0.804 - - - - - 0.853 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
30. syt9a ENSDARG00000003994 298 1.656 - - - - - 0.750 - 0.906 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
31. zgc:136439 ENSDARG00000009267 720 1.654 - - 0.781 - - - - 0.873 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
32. rcbtb2 ENSDARG00000090687 1658 1.649 - 0.824 0.825 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
33. qki2 ENSDARG00000010018 2230 1.642 - - - - - 0.761 - 0.881 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
34. dna2 ENSDARG00000078759 846 1.64 - 0.713 - - - - - 0.927 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
35. stap2a ENSDARG00000092810 591 1.637 - - - - - 0.717 - 0.920 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
36. cldn5a ENSDARG00000043716 3865 1.634 - - - - - 0.726 - 0.908 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
37. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.626 - - - - - - 0.702 0.924 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
38. cplx4c ENSDARG00000094889 253 1.626 - 0.718 - - - - - 0.908 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
39. add2 ENSDARG00000074581 1402 1.623 - 0.814 - - - 0.809 - - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
40. efnb3b ENSDARG00000042277 5823 1.622 - 0.728 - - - 0.894 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
41. daxx ENSDARG00000000729 734 1.62 - - - - - 0.713 - 0.907 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
42. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.619 - - 0.809 - - - - 0.810 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
43. zic1 ENSDARG00000015567 2520 1.619 - - - - - 0.719 - 0.900 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
44. vhl ENSDARG00000070617 663 1.619 0.703 - - - - - - 0.916 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
45. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.616 - - - - - - 0.776 0.840 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
46. CAMTA2 ENSDARG00000092799 1950 1.615 - - 0.811 - - 0.804 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
47. BX927349.2 BX927349.2 325 1.611 - - - - - - 0.715 0.896 -
48. knop1 ENSDARG00000077721 2198 1.609 - 0.766 - - - - - 0.843 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
49. atf7ip ENSDARG00000069619 5495 1.607 - - - - - - 0.777 0.830 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
50. NOP14 ENSDARG00000098859 1288 1.599 - 0.725 - - - - - 0.874 - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
51. PVRL4 1691 1.598 - - 0.753 - - - - 0.845 - poliovirus receptor-related 4
52. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.597 - 0.798 - - - 0.799 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
53. C3H19orf43 C3H19orf43 2961 1.595 - - - - - 0.712 - 0.883 -
54. CACFD1 ENSDARG00000090818 1298 1.586 - - - - - 0.706 - 0.880 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
55. fat3a ENSDARG00000033840 902 1.586 - - 0.754 - - - - 0.832 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
56. tmub1 ENSDARG00000038787 1012 1.585 - 0.830 0.755 - - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
57. sp3a ENSDARG00000001549 1994 1.585 - 0.841 0.744 - - - - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
58. IWS1 2428 1.585 - - 0.762 - - - - 0.823 - IWS1, SUPT6H interacting protein, transcript variant X2
59. zgc:66475 ENSDARG00000099519 1348 1.583 - - 0.746 - - - - 0.837 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
60. utp3 ENSDARG00000056720 922 1.581 - 0.707 - - - - - 0.874 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
61. ppap2b ppap2b 2900 1.578 - 0.724 - - - - - 0.854 -
62. ssbp1 ENSDARG00000039350 809 1.577 - 0.702 - - - - - 0.875 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
63. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.577 - - 0.736 - - - - 0.841 - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
64. zfyve21 ENSDARG00000027887 1687 1.576 - - 0.787 - - - - 0.789 - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
65. polr2k ENSDARG00000075616 2047 1.575 - 0.726 - - - - - 0.849 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
66. rnd3a ENSDARG00000076799 4705 1.574 - - 0.722 - - - - 0.852 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
67. sumo3a ENSDARG00000028119 13447 1.573 - - - - - 0.828 0.745 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
68. pkib ENSDARG00000053110 527 1.568 - - - - - 0.727 - 0.841 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
69. ssb ENSDARG00000029252 3394 1.567 - 0.785 - - - - - 0.782 - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
70. nkd1 ENSDARG00000020053 4450 1.565 - 0.751 - - - - - 0.814 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
71. sf1 ENSDARG00000008188 5142 1.565 - - - - - 0.799 - - 0.766 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
72. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.564 - - - - - 0.716 - 0.848 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
73. nova1 ENSDARG00000020178 4129 1.562 - - - - - 0.723 - 0.839 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
74. hif1an ENSDARG00000031915 2098 1.562 - - - - - - - 0.823 0.739 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
75. exoc5 ENSDARG00000060323 2450 1.561 - - - - - - 0.706 0.855 - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
76. pogzb ENSDARG00000076542, ENSDARG00000113904 787 1.561 - - - - - - - 0.831 0.730 pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
77. PPIP5K1 PPIP5K1 997 1.56 - 0.767 - - - - - 0.793 -
78. CASK CASK 1750 1.555 - - 0.781 - - 0.774 - - -
79. r3hcc1l ENSDARG00000089243 1254 1.552 - 0.701 - - - - 0.851 - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
80. RNF38 ENSDARG00000062055 3901 1.55 - - - - - 0.749 0.801 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
81. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.549 - - 0.747 - - - - 0.802 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
82. Mar-07 Mar-07 2926 1.547 - 0.700 - - - - - 0.847 -
83. cx43.4 ENSDARG00000007099 16369 1.546 - 0.794 - - - - - 0.752 - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
84. SERBP1 SERBP1 9276 1.544 - - - - - 0.785 0.759 - -
85. si:ch211-13c6.2 ENSDARG00000027738 1521 1.544 - - - - - - - 0.824 0.720 si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
86. phldb1a ENSDARG00000061093 1637 1.544 - - 0.750 - - 0.794 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
87. CABZ01088330.1 CABZ01088330.1 679 1.544 - - - - - 0.729 - 0.815 -
88. si:dkey-19e4.5 ENSDARG00000089886 2562 1.544 - - - - - 0.732 - 0.812 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
89. id4 ENSDARG00000045131 2916 1.543 - - - - - 0.816 0.727 - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
90. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.542 - - 0.776 - - 0.766 - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
91. rap2c ENSDARG00000015649 4709 1.542 - - 0.714 - - - 0.828 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
92. sarnp ENSDARG00000059357 4768 1.541 - - - - - 0.752 - 0.789 - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
93. tfdp2 ENSDARG00000042835 1985 1.541 - - 0.800 - - 0.741 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
94. ttk ENSDARG00000041361 3911 1.539 - - - - - - 0.758 0.781 - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
95. rbmx ENSDARG00000014244 3445 1.538 - 0.751 - - - - 0.787 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
96. rab23 ENSDARG00000004151 1077 1.537 - 0.750 - - - 0.787 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
97. leprel2 leprel2 812 1.536 - 0.741 0.795 - - - - - -
98. tnks tnks 1695 1.534 - - 0.825 - - 0.709 - - -
99. snrpe ENSDARG00000033175 7462 1.532 - 0.725 - - - 0.807 - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
100. mir34 176 1.531 0.782 - - - - 0.749 - - - microRNA 34

There are 2072 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA