Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR388095.3

Gene Name Gene ID Reads Annotation
CR388095.3 CR388095.3 2548










Genes with expression patterns similar to CR388095.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR388095.3 CR388095.3 2548 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.806 - - - - - - 1.000 0.806 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
3. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.801 - 0.803 - 0.998 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
4. C3H19orf43 C3H19orf43 2961 1.769 - - - 0.998 - - - 0.771 -
5. ARHGAP23 ARHGAP23 3946 1.724 - 0.726 - 0.998 - - - - -
6. rnd3a ENSDARG00000076799 4705 1.719 - - - - - - 0.999 0.720 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
7. idh3g ENSDARG00000023648 4877 1.713 - - - 0.998 - - - 0.715 - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
8. ndufaf3 ENSDARG00000112931 743 1.704 0.862 0.842 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-282]
9. CNDP1 CNDP1 6456 1.703 - 0.707 - 0.996 - - - - -
10. hmgb1b ENSDARG00000030479 10398 1.682 - - 0.704 0.978 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
11. ENSDARG00000089986 ENSDARG00000089986 308 1.658 0.832 - - - - - - 0.826 -
12. med22 ENSDARG00000014148 1307 1.602 0.818 - - - - - - 0.784 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
13. si:ch211-241b2.1 ENSDARG00000102950 526 1.552 0.718 0.834 - - - - - - - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
14. ncoa6 ENSDARG00000071272 759 1.535 0.777 - - - - 0.758 - - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
15. smad1 ENSDARG00000027199, ENSDARG00000112617, ENSDARG00000115674 2791 1.528 - - - - - 0.710 - 0.818 - SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]
16. rnf26 ENSDARG00000074074 762 1.487 0.722 - - - - - - 0.765 - ring finger protein 26 [Source:ZFIN;Acc:ZDB-GENE-060727-1]
17. zic5 ENSDARG00000016022 1034 1.472 - 0.705 - - - - - 0.767 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
18. nudc ENSDARG00000104837 1798 1.457 - 0.715 - - - - - 0.742 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
19. fam160a1 fam160a1 1445 1 - - - - - - 1.000 - -
20. camsap2 camsap2 1448 1 - - - 1.000 - - - - -
21. pdlim5b ENSDARG00000027600 4252 1 - - - - - - 1.000 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
22. gcn1l1 gcn1l1 6031 1 - - - - - - 1.000 - -
23. rfxap ENSDARG00000076891 1299 1 - - - - - - 1.000 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
24. slc4a2b ENSDARG00000052330 1900 1 - - - - - - 1.000 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
25. plagl2 ENSDARG00000076657 2057 1 - - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
26. FAT1 FAT1 689 1 - - - - - - 1.000 - -
27. cenpf ENSDARG00000055133 5267 1 - - - - - - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
28. ttll4 ENSDARG00000078935 1663 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
29. CCNA2 ENSDARG00000011094 3996 1 - - - - - - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
30. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - 1.000 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
31. oafa ENSDARG00000075851 2015 1 - - - - - - 1.000 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
32. cx44.1 cx44.1 799 1 - - - - - - 1.000 - -
33. lepre1 lepre1 5346 1 - - - - - - 1.000 - -
34. PREX2 ENSDARG00000071692 827 1 - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
35. slc7a4 ENSDARG00000068286 1693 1 - - - - - - 1.000 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
36. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1 - - - - - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
37. LMLN ENSDARG00000061265 1618 1 - - - - - - 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
38. rtf1 ENSDARG00000008947 6596 0.999 - - - - - - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
39. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
40. ryr1a ENSDARG00000011422 2377 0.999 - - - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
41. CR847934.1 CR847934.1 2658 0.999 - - - - - - 0.999 - -
42. wwp2 ENSDARG00000061345 3459 0.999 - - - - - - 0.999 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
43. mpi ENSDARG00000030786 3052 0.999 - - - 0.999 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
44. TSG101 TSG101 1686 0.999 - - - - - - 0.999 - -
45. alcamb ENSDARG00000058538 5672 0.999 - - - - - - 0.999 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
46. hoxb4a ENSDARG00000013533 3857 0.999 - - - 0.999 - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
47. b3gnt5b ENSDARG00000004396 1152 0.999 - - - 0.999 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
48. EPT1 EPT1 1912 0.999 - - - 0.999 - - - - -
49. pinx1 ENSDARG00000023532 4452 0.999 - - - - - - 0.999 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
50. lhfpl2b_1 ENSDARG00000098153 1596 0.999 - - - - - - 0.999 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
51. si:dkey-184p9.7 ENSDARG00000092726 2679 0.999 - - - - - - 0.999 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
52. dre-mir-26a-2 ENSDARG00000086601 1267 0.999 - - - 0.999 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
53. camkmt ENSDARG00000095224 1204 0.999 - - - 0.999 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
54. pycr1 pycr1 1258 0.999 - - - 0.999 - - - - -
55. slc15a4 ENSDARG00000102612 1096 0.999 - - - 0.999 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
56. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.999 - - - 0.999 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
57. mertk mertk 1232 0.999 - - - 0.999 - - - - -
58. atp6ap1b ENSDARG00000037153 3970 0.999 - - - - - - 0.999 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
59. hoxc10a ENSDARG00000070348 2323 0.999 - - - - - - 0.999 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
60. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.999 - - - - - - 0.999 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
61. herpud2 ENSDARG00000021033 1800 0.999 - - - 0.999 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
62. FAM35A FAM35A 1091 0.999 - - - 0.999 - - - - -
63. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.999 - - - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
64. NDUFB2 ENSDARG00000045490 9141 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
65. tchp ENSDARG00000035605 1695 0.999 - - - 0.999 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
66. pcif1 ENSDARG00000099084 2851 0.999 - - - - - - 0.999 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
67. dct ENSDARG00000006008 2466 0.999 - - - - - - 0.999 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
68. rhoae rhoae 4047 0.998 - - - 0.998 - - - - -
69. map3k1 ENSDARG00000098405 3043 0.998 - - - 0.998 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
70. dcxr ENSDARG00000079271 3289 0.998 - - - 0.998 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
71. pnpla7a ENSDARG00000062986 1793 0.998 - - - 0.998 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
72. CU929431.1 CU929431.1 2234 0.998 - - - 0.998 - - - - -
73. acsl3b ENSDARG00000014674 3748 0.998 - - - 0.998 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
74. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.998 - - - 0.998 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
75. alas1 ENSDARG00000021059 4892 0.998 - - - 0.998 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
76. serbp1a ENSDARG00000074242 10818 0.998 - - - 0.998 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
77. ABHD12B ABHD12B 1877 0.998 - - - - - - 0.998 - -
78. AMBRA1_1 AMBRA1_1 2179 0.998 - - - 0.998 - - - - -
79. nkrf ENSDARG00000100536 1873 0.997 - - - 0.997 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
80. CU463857.1 CU463857.1 5541 0.997 - - - 0.997 - - - - -
81. txndc5 ENSDARG00000009342 5387 0.997 - - - 0.997 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
82. pcmt ENSDARG00000015201 5132 0.997 - - - 0.997 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
83. lfng ENSDARG00000037879 11783 0.997 - - - - - - 0.997 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
84. ptprfb ENSDARG00000005754 7178 0.997 - - - - - - 0.997 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
85. aldh7a1 ENSDARG00000018426 4637 0.997 - - - - - - 0.997 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
86. purbb ENSDARG00000103546 4983 0.997 - - - - - - 0.997 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
87. si:ch211-51e12.7 ENSDARG00000045914 9598 0.997 - - - - - - 0.997 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
88. gap43 ENSDARG00000099744 4114 0.997 - - - 0.997 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
89. blcap ENSDARG00000052073 8646 0.996 - - - 0.996 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
90. jagn1b ENSDARG00000014995 2063 0.996 - - - - - - 0.996 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
91. ADAMTS3 ENSDARG00000060127 2839 0.996 - - - 0.996 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
92. fermt2 ENSDARG00000020242 9351 0.996 - - - 0.996 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
93. ncl ENSDARG00000002710 16951 0.996 - - - - - - 0.996 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
94. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.996 - - - - - - 0.996 - -
95. ist1 ENSDARG00000051888 4536 0.996 - - - - - - 0.996 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
96. slmo2 slmo2 5559 0.996 - - - 0.996 - - - - -
97. ppp6c ENSDARG00000002949 2948 0.996 - - - 0.996 - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
98. SERBP1 SERBP1 9276 0.995 - - - 0.995 - - - - -
99. EIF1B ENSDARG00000029445 5034 0.995 - - - 0.995 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
100. vcl vcl 6667 0.995 - - - - - - 0.995 - -

There are 919 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA