Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CR339041.3

Gene Name Gene ID Reads Annotation
CR339041.3 ENSDARG00000115781 10










Genes with expression patterns similar to CR339041.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CR339041.3 ENSDARG00000115781 10 2 - - - - - - - 1.000 1.000
2. C20H2orf70 C20H2orf70 8 1.591 - - - - - - - 0.713 0.878
3. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - - 1.000 -
4. fasn_1 ENSDARG00000087657 31 0.938 - - - - - - - - 0.938 fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
5. BX294190.1 BX294190.1 17 0.93 - - - - - - - - 0.930
6. cyb5d1 ENSDARG00000056007 67 0.883 - - - - - - - - 0.883 cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
7. rcan3 ENSDARG00000032623, ENSDARG00000115470 730 0.882 - - - - - - - - 0.882 regulator of calcineurin 3 [Source:ZFIN;Acc:ZDB-GENE-040718-445]
8. CABZ01060296.1 CABZ01060296.1 9 0.88 - - - - - - - - 0.880
9. UBXN11 ENSDARG00000053828 22 0.88 - - - - - - - - 0.880 UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
10. pcdh1a6 ENSDARG00000097170 6 0.88 - - - - - - - - 0.880 protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
11. slc23a1 ENSDARG00000015033 40 0.879 - - - - - - - - 0.879 solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
12. si:dkey-20i20.11 ENSDARG00000101885 17 0.875 - - - - - - - - 0.875 si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
13. ttc25_1 ENSDARG00000058140 32 0.875 - - - - - - - - 0.875 tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
14. wnt5a ENSDARG00000104973 21 0.875 - - - - - - - - 0.875 wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
15. CR854923.1 CR854923.1 18 0.875 - - - - - - - - 0.875
16. CU184832.2 CU184832.2 35 0.874 - - - - - - - - 0.874
17. slc22a5 ENSDARG00000101021 20 0.869 - - - - - - - - 0.869 solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
18. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 0.864 - - - - - - - - 0.864 Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
19. SLC15A5 ENSDARG00000089974 18 0.863 - - - - - - - - 0.863 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
20. efemp2b_1 ENSDARG00000020811 77 0.862 - - - - - - - - 0.862 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
21. PLA2G10 PLA2G10 9 0.857 - - - - - - - - 0.857
22. GLIPR1 GLIPR1 37 0.854 - - - - - - - - 0.854
23. chm ENSDARG00000003845 498 0.852 - - - - - - - - 0.852 choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
24. si:dkey-220o21.2 si:dkey-220o21.2 19 0.85 - - - - - - - - 0.850
25. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 0.85 - - - - - - - - 0.850 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
26. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.849 - - - - - - - - 0.849 adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
27. TESK1_1 TESK1_1 276 0.847 - - - - - - - - 0.847
28. si:ch211-110p13.9 ENSDARG00000093821 82 0.843 - - - - - - - - 0.843 si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
29. CABZ01058371.1 CABZ01058371.1 23 0.841 - - - - - - - - 0.841
30. ARSI_1 ARSI_1 38 0.831 - - - - - - - - 0.831
31. zgc:113030 ENSDARG00000069869 53 0.83 - - - - - - - - 0.830 zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
32. ENKD1 ENSDARG00000043550 44 0.829 - - - - - - - - 0.829 enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
33. tmem237a ENSDARG00000041735 13 0.825 - - - - - - - - 0.825 transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
34. glipr2l ENSDARG00000016837 440 0.823 - - - - - - - - 0.823 GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
35. BEGAIN_1 BEGAIN_1 7 0.822 - - - - - - - - 0.822
36. mthfd2l ENSDARG00000054199 25 0.822 - - - - - - - - 0.822 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
37. GPR180 73 0.82 - - - - - - - - 0.820 G protein-coupled receptor 180, transcript variant X2
38. NFATC4 ENSDARG00000054162 44 0.818 - - - - - - - - 0.818 nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
39. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 0.817 - - - - - - - - 0.817
40. st8sia1 ENSDARG00000098221 34 0.817 - - - - - - - - 0.817 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
41. casz1 ENSDARG00000037030 85 0.817 - - - - - - - - 0.817 castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
42. zgc:158706 zgc:158706 15 0.811 - - - - - - - - 0.811
43. si:dkey-258f14.2 ENSDARG00000094874 297 0.808 - - - - - - - - 0.808 si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
44. spef2 ENSDARG00000098330 59 0.807 - - - - - - - - 0.807 sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
45. csf1rb ENSDARG00000053624 9 0.806 - - - - - - - - 0.806 colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
46. UFSP1 ENSDARG00000061610 81 0.804 - - - - - - - - 0.804 UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
47. tpgs2 ENSDARG00000011926 48 0.802 - - - - - - - - 0.802 tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
48. mir130b 180 0.8 - - - - - - - - 0.800 microRNA 130b
49. pex1 ENSDARG00000098904 168 0.797 - - - - - - - - 0.797 peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
50. PRRT4 ENSDARG00000088343 36 0.795 - - - - - - - - 0.795 proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
51. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.795 - - - - - - - - 0.795 guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
52. sema3h ENSDARG00000042616 75 0.795 - - - - - - - - 0.795 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
53. dnah1 ENSDARG00000100115 17 0.792 - - - - - - - - 0.792 dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
54. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.792 - - - - - - - - 0.792 cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
55. thbs3a ENSDARG00000077641 631 0.79 - - - - - - - - 0.790 thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
56. si:dkey-1b17.1 ENSDARG00000102258 15 0.789 - - - - - - - - 0.789 si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
57. RNF39 RNF39 52 0.787 - - - - - - - - 0.787
58. chd 56 0.783 - - - - - - - - 0.783 chordin
59. sema6d ENSDARG00000002748 133 0.782 - - - - - - - - 0.782 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
60. GM2A ENSDARG00000088439 55 0.78 - - - - - - - - 0.780 GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
61. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 0.776 - - - - - - - - 0.776 zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
62. znf106b ENSDARG00000091947 108 0.774 - - - - - - - - 0.774 zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
63. PKD1 PKD1 260 0.772 - - - - - - - - 0.772
64. ITGA2 ITGA2 40 0.771 - - - - - - - - 0.771
65. kcng4 kcng4 37 0.768 - - - - - - - - 0.768
66. tpst2 ENSDARG00000099155 196 0.766 - - - - - - - - 0.766 tyrosylprotein sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1400]
67. neu3.3 ENSDARG00000058327, ENSDARG00000114607 23 0.764 - - - - - - - - 0.764 sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
68. ppp1r37_1 ENSDARG00000078458 36 0.763 - - - - - - - - 0.763 protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
69. sh3bp5la ENSDARG00000019160 441 0.763 - - - - - - - - 0.763 SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
70. shhb ENSDARG00000038867 338 0.762 - - - - - - - - 0.762 sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
71. U1_50 U1_50 62 0.761 - - - - - - - - 0.761
72. efnb2b ENSDARG00000074050 77 0.761 - - - - - - - - 0.761 ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
73. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 0.76 - - - - - - - - 0.760 nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
74. alkbh5 ENSDARG00000063003 185 0.757 - - - - - - - - 0.757 alkB homolog 5, RNA demethylase [Source:ZFIN;Acc:ZDB-GENE-061013-602]
75. cep135 ENSDARG00000002991 164 0.754 - - - - - - - - 0.754 centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
76. RFWD3 ENSDARG00000087752 167 0.753 - - - - - - - - 0.753 ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
77. RSPH1 289 0.747 - - - - - - - - 0.747 radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
78. ccdc125 ENSDARG00000056477 158 0.745 - - - - - - - - 0.745 coiled-coil domain containing 125 [Source:ZFIN;Acc:ZDB-GENE-060526-104]
79. KLHL35 ENSDARG00000063577 77 0.74 - - - - - - - - 0.740 kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
80. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 0.737 - - - - - - - - 0.737 sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
81. ttc36 ENSDARG00000011693 61 0.737 - - - - - - - - 0.737 tetratricopeptide repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-041114-87]
82. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.736 - - - - - - - - 0.736 polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
83. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 0.735 - - - - - - - - 0.735
84. CR774186.2 CR774186.2 104 0.735 - - - - - - - - 0.735
85. adgb ENSDARG00000005595 118 0.732 - - - - - - - - 0.732 androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
86. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.732 - - - - - - - - 0.732 fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
87. rbm5 ENSDARG00000098280 396 0.731 - - - - - - - - 0.731 RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
88. MAATS1 ENSDARG00000006292 59 0.73 - - - - - - - - 0.730 MYCBP-associated, testis expressed 1 [Source:ZFIN;Acc:ZDB-GENE-070912-489]
89. pex10 ENSDARG00000041511 52 0.73 - - - - - - - - 0.730 peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
90. zgc:173994 zgc:173994 204 0.729 - - - - - - - - 0.729
91. CU633988.1 CU633988.1 97 0.728 - - - - - - - - 0.728
92. si:dkey-15h8.16 ENSDARG00000098613 187 0.727 - - - - - - - - 0.727 si:dkey-15h8.16 [Source:ZFIN;Acc:ZDB-GENE-050208-707]
93. stk16 ENSDARG00000037777 255 0.727 - - - - - - - - 0.727 serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
94. olig3 ENSDARG00000074253 84 0.727 - - - - - - - - 0.727 oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
95. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 0.725 - - - - - - - - 0.725 novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
96. PCYOX1L ENSDARG00000069003 420 0.723 - - - - - - - - 0.723 prenylcysteine oxidase 1 like [Source:ZFIN;Acc:ZDB-GENE-141212-302]
97. CR450842.1 CR450842.1 129 0.716 - - - - - - - - 0.716
98. ddx11 ENSDARG00000011072 325 0.714 - - - - - - - - 0.714 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
99. cx27.5 ENSDARG00000035553 12 0.713 - - - - - - - 0.713 - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
100. slc6a15 ENSDARG00000062821, ENSDARG00000109790, ENSDARG00000114469 5 0.713 - - - - - - - 0.713 - solute carrier family 6 (neutral amino acid transporter), member 15 [Source:ZFIN;Acc:ZDB-GENE-050420-93]

There are 61 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA