Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CPT1A

Gene Name Gene ID Reads Annotation
CPT1A ENSGALG00000007077 3199 carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]











Genes with expression patterns similar to CPT1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CPT1A ENSGALG00000007077 3199 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
2. RB1CC1 ENSGALG00000015259 4211 2.282 - - 0.780 - - - 0.785 0.717 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
3. FURIN ENSGALG00000008341 2609 1.639 - - 0.868 - - - - - 0.771 - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
4. CEP70 ENSGALG00000012087 7992 1.609 - - 0.795 - - - - 0.814 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
5. CDC42BPA ENSGALG00000009158 3926 1.597 - - 0.886 - - - 0.711 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
6. USP15 ENSGALG00000030024 2761 1.556 - - 0.810 - - - 0.746 - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
7. FAM114A2 ENSGALG00000004068 2970 1.544 - - 0.811 - - - - 0.733 - - family with sequence similarity 114 member A2 [Source:HGNC Symbol;Acc:HGNC:1333]
8. FAM110D ENSGALG00000046085 2193 1.538 - - 0.784 - - - - 0.754 - - family with sequence similarity 110 member D [Source:HGNC Symbol;Acc:HGNC:25860]
9. FKBP7 ENSGALG00000009149 6742 1.506 - - - - - - 0.744 0.762 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
10. C1GALT1 ENSGALG00000009752 7148 1.501 - - - - - - - 0.766 0.735 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
11. PTCHD1 ENSGALG00000016358 3882 1.499 - - 0.776 - - - - 0.723 - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
12. LSM4 ENSGALG00000003385 4050 1.494 - - 0.714 - - - 0.780 - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17259]
13. DYNC1I2 ENSGALG00000009551 5420 1.481 - - 0.718 - - - 0.763 - - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
14. TMED5 27507 1.48 - - 0.743 - - - - - 0.737 - transmembrane p24 trafficking protein 5
15. PAPSS1 ENSGALG00000010542 5631 1.475 - - 0.714 - - - - 0.761 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
16. ANG-1 ANG-1 5239 1.46 - - - - - - 0.721 0.739 - -
17. ALDH3A2 ENSGALG00000004763 3363 1.452 - - 0.702 - - - - 0.750 - - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
18. JOSD1 ENSGALG00000041766 1445 1.447 - - - - - - 0.715 0.732 - - Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
19. TMEM214 ENSGALG00000022850 7943 1.439 - - 0.701 - - - 0.738 - - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
20. TRANK1 ENSGALG00000037629 2268 0.926 - - 0.926 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
21. NLGN1 ENSGALG00000040938 651 0.916 - - 0.916 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
22. ATP2B2 ENSGALG00000030908 584 0.914 - - 0.914 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
23. C-MET C-MET 1650 0.913 - - 0.913 - - - - - - -
24. AGPAT9 AGPAT9 1823 0.912 - - 0.912 - - - - - - -
25. S100A11 ENSGALG00000036711 23454 0.911 - - 0.911 - - - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
26. PDCD4 ENSGALG00000008700 574 0.909 - - 0.909 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
27. PTPN5 ENSGALG00000006368 440 0.903 - - 0.903 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
28. PVALB1 PVALB1 267 0.9 - - 0.900 - - - - - - -
29. PKP4 ENSGALG00000012561 3087 0.9 - - 0.900 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
30. DLX5 ENSGALG00000009129 1395 0.895 - - 0.895 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
31. ZNF423 ENSGALG00000003891 103 0.895 - - 0.895 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
32. INTS9 ENSGALG00000016631 742 0.895 - - 0.895 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
33. ATP2B4 ENSGALG00000003601 3746 0.895 - - 0.895 - - - - - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
34. ADAMTS2 ENSGALG00000032974 141 0.893 - - 0.893 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
35. YLPM1 671 0.893 - - 0.893 - - - - - - - YLP motif containing 1
36. SLC4A4 ENSGALG00000031105 534 0.892 - - 0.892 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
37. SLU7 ENSGALG00000034414 5386 0.891 - - 0.891 - - - - - - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
38. MGMT ENSGALG00000042949 53 0.891 - - 0.891 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
39. RHOC ENSGALG00000001569 53 0.89 - - 0.890 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
40. PLEKHG5 ENSGALG00000027476 42 0.89 - - 0.890 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
41. GRIK3 ENSGALG00000002098 111 0.89 - - 0.890 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
42. ENSGALG00000023180 ENSGALG00000023180 83 0.889 - - 0.889 - - - - - - -
43. KIAA0195 KIAA0195 48 0.889 - - 0.889 - - - - - - -
44. PCP4 ENSGALG00000022819 880 0.889 - - 0.889 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
45. POMC ENSGALG00000016600 99 0.889 - - 0.889 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
46. MT1 MT1 218 0.888 - - 0.888 - - - - - - -
47. LYPD6B ENSGALG00000028759 831 0.888 - - 0.888 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
48. NCAPD3 ENSGALG00000001491 221 0.887 - - 0.887 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
49. MRPS27 ENSGALG00000015002 6541 0.887 - - 0.887 - - - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
50. RPUSD1 ENSGALG00000005315 651 0.887 - - 0.887 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
51. TMEM97 ENSGALG00000005702 2037 0.887 - - 0.887 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
52. CXorf30 CXorf30 172 0.886 - - 0.886 - - - - - - -
53. BMP4 ENSGALG00000012429 4306 0.885 - - 0.885 - - - - - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
54. ZEB2 ENSGALG00000040465 315 0.884 - - 0.884 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
55. LGALS3 ENSGALG00000012173 3306 0.884 - - 0.884 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
56. TMEM200C ENSGALG00000030210 1434 0.884 - - 0.884 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
57. GOLGA2 ENSGALG00000004881 677 0.884 - - 0.884 - - - - - - - golgin A2, transcript variant X7
58. TSEN2 ENSGALG00000004981 1929 0.883 - - 0.883 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
59. CASP1 ENSGALG00000001049 1067 0.882 - - 0.882 - - - - - - - caspase 1, transcript variant X2
60. ACOT9 ENSGALG00000016351 330 0.882 - - 0.882 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
61. RAB3B ENSGALG00000010567 894 0.881 - - 0.881 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
62. GBGT1 ENSGALG00000003340 399 0.877 - - 0.877 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
63. TRIM45 ENSGALG00000014818 1258 0.877 - - 0.877 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
64. AP3M1 ENSGALG00000005070 712 0.876 - - 0.876 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
65. DZIP1 ENSGALG00000016895 681 0.875 - - 0.875 - - - - - - - DAZ interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:20908]
66. C19H17ORF85 C19H17ORF85 2538 0.874 - - 0.874 - - - - - - -
67. SCPEP1 ENSGALG00000003185 2322 0.873 - - 0.873 - - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
68. SNX2 ENSGALG00000005337 590 0.873 - - 0.873 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
69. SULT2B1L1 ENSGALG00000023472 569 0.873 - - 0.873 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
70. LZIC ENSGALG00000002616 9052 0.872 - - 0.872 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
71. WBSCR17 581 0.872 - - 0.872 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
72. CDV3 ENSGALG00000032316 693 0.872 - - 0.872 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
73. INVS ENSGALG00000013441 1123 0.871 - - 0.871 - - - - - - - inversin [Source:NCBI gene;Acc:395234]
74. COL6A1 ENSGALG00000005974 1991 0.871 - - 0.871 - - - - - - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
75. LMO4 ENSGALG00000006252 3686 0.871 - - 0.871 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
76. LHFP 167 0.871 - - 0.871 - - - - - - - lipoma HMGIC fusion partner
77. SIDT2 ENSGALG00000030139 1924 0.871 - - 0.871 - - - - - - - SID1 transmembrane family member 2, transcript variant X2
78. METTL6 ENSGALG00000040665 4467 0.87 - - 0.870 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
79. CCDC25 ENSGALG00000016586 351 0.869 - - 0.869 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
80. FBXO34 ENSGALG00000032563 656 0.867 - - 0.867 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
81. MPG ENSGALG00000028691 1874 0.867 - - 0.867 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
82. TANC1 ENSGALG00000012570 4196 0.867 - - 0.867 - - - - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
83. C5H14ORF166 C5H14ORF166 24176 0.866 - - 0.866 - - - - - - -
84. MAN1A1 ENSGALG00000014878 1061 0.866 - - 0.866 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
85. SDCBP ENSGALG00000015436 1228 0.865 - - 0.865 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
86. PHIP ENSGALG00000015889 2348 0.865 - - 0.865 - - - - - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
87. FAM178A FAM178A 2738 0.865 - - 0.865 - - - - - - -
88. CIDEC ENSGALG00000026945 718 0.865 - - 0.865 - - - - - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
89. C8H1ORF52 C8H1ORF52 118 0.865 - - 0.865 - - - - - - -
90. ENSGALG00000028359 ENSGALG00000028359 479 0.864 - - 0.864 - - - - - - -
91. IP6K1 ENSGALG00000002510 827 0.864 - - 0.864 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
92. RIPPLY3 1380 0.863 - - 0.863 - - - - - - - ripply transcriptional repressor 3
93. KLHL15 ENSGALG00000016345 1638 0.862 - - 0.862 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
94. ENTPD5 ENSGALG00000010202 69 0.862 - - 0.862 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
95. SYNCRIP ENSGALG00000015830 30555 0.862 - - 0.862 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
96. CASP9 ENSGALG00000001366 1356 0.862 - - 0.862 - - - - - - - caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]
97. BMP2 ENSGALG00000029301 379 0.862 - - 0.862 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
98. WDR11 ENSGALG00000035013 3393 0.862 - - 0.862 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
99. LRP2 ENSGALG00000010858 363 0.861 - - 0.861 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
100. SORCS1 ENSGALG00000008465 468 0.861 - - 0.861 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]

There are 513 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA