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Results for CPSF4

Gene Name Gene ID Reads Annotation
CPSF4 ENSGALG00000004714 14353 cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]











Genes with expression patterns similar to CPSF4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CPSF4 ENSGALG00000004714 14353 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
2. PPAT ENSGALG00000013728 7563 1.811 - - - - - - 0.852 0.959 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
3. GLO1 ENSGALG00000010127 31662 1.739 - - - - - - 0.807 0.932 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
4. ADAR ENSGALG00000021475 6004 1.736 - - - - - - 0.777 0.959 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
5. CREB1 ENSGALG00000008494 2219 1.73 - - - 0.769 - - - 0.961 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
6. INTS2 ENSGALG00000005269 6966 1.677 - - - - - - 0.719 0.958 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
7. THRAP3 ENSGALG00000002144 21958 1.65 - - - - - - 0.767 0.883 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
8. FBXO9 ENSGALG00000016320 9600 1.601 - - - - - - 0.767 0.834 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
9. MMD ENSGALG00000003078 21311 1.562 - - - - - - 0.769 0.793 - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
10. TMEM199 ENSGALG00000023757 10781 1.561 - - - - - - 0.711 0.850 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
11. NUSAP1 ENSGALG00000008584 9955 1.524 - - - - - - 0.746 0.778 - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
12. NDUFV2 ENSGALG00000036625 29234 1.515 - - - - - - 0.721 0.794 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
13. BAG5 ENSGALG00000031062 4498 1.5 - - - 0.770 - - 0.730 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
14. SLC25A3 ENSGALG00000011514 62606 1.486 - - - 0.703 - - 0.783 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
15. GLRX3 ENSGALG00000010464 22578 1.478 - - - 0.735 - - 0.743 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
16. NUDT4 ENSGALG00000011285 2998 1.463 - - - 0.745 - - 0.718 - - - nudix hydrolase 4, transcript variant X5
17. PLAA ENSGALG00000001782 5459 1.462 - - - 0.733 - - 0.729 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
18. TBCD ENSGALG00000001503 7880 1.454 - - - 0.716 - - 0.738 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
19. PFKL ENSGALG00000006543 4361 1.453 - - - 0.738 - - 0.715 - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
20. UQCRC1 ENSGALG00000005789 23201 1.435 - - - - - - 0.731 0.704 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
21. BMP4 ENSGALG00000012429 4306 0.968 - - - - - - - 0.968 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
22. TMEM69 ENSGALG00000010279 716 0.961 - - - - - - - 0.961 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
23. VEGFC ENSGALG00000010847 2197 0.961 - - - - - - - 0.961 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
24. USP30 ENSGALG00000040265 2000 0.961 - - - - - - - 0.961 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
25. STAMBP ENSGALG00000042555 1362 0.961 - - - - - - - 0.961 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
26. C9orf89 C9orf89 3056 0.961 - - - - - - - 0.961 - -
27. TDRD1 ENSGALG00000046180 612 0.961 - - - - - - - 0.961 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
28. PRRX2 ENSGALG00000028236 1990 0.961 - - - - - - - 0.961 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
29. ENSGALG00000028413 ENSGALG00000028413 551 0.961 - - - - - - - 0.961 - -
30. USP42 ENSGALG00000003378 1392 0.961 - - - - - - - 0.961 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
31. ZNF462 ENSGALG00000015451 12653 0.96 - - - - - - - 0.960 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
32. GNA12 ENSGALG00000004368 692 0.96 - - - - - - - 0.960 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
33. CTU2 4818 0.96 - - - - - - - 0.960 - - cytosolic thiouridylase subunit 2, transcript variant X3
34. RRBP1 ENSGALG00000008676 5376 0.96 - - - - - - - 0.960 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
35. SIN3A ENSGALG00000001644 1141 0.96 - - - - - - - 0.960 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
36. SLBP ENSGALG00000015712 5586 0.96 - - - - - - - 0.960 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
37. TNFRSF21 ENSGALG00000016719 2762 0.96 - - - - - - - 0.960 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
38. SLC52A3 ENSGALG00000006194 3952 0.959 - - - - - - - 0.959 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
39. VPS36 ENSGALG00000017026 3658 0.959 - - - - - - - 0.959 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
40. CWC22 ENSGALG00000009001 5984 0.959 - - - - - - - 0.959 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
41. PHAX ENSGALG00000014691 8114 0.958 - - - - - - - 0.958 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
42. GYG1 ENSGALG00000035535 6311 0.957 - - - - - - - 0.957 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
43. FAT1 ENSGALG00000013579 6030 0.957 - - - - - - - 0.957 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
44. PTK7 ENSGALG00000008609 8081 0.956 - - - - - - - 0.956 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
45. KLHDC2 ENSGALG00000012244 12903 0.954 - - - - - - - 0.954 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
46. LMO7 ENSGALG00000016920 3809 0.954 - - - - - - - 0.954 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
47. PDCD6 ENSGALG00000013400 7611 0.953 - - - - - - - 0.953 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
48. PDCL3 ENSGALG00000016772 14897 0.948 - - - - - - - 0.948 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
49. MAP4K3 ENSGALG00000039720 5124 0.942 - - - - - - - 0.942 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
50. WDFY3 10775 0.941 - - - - - - - 0.941 - - WD repeat and FYVE domain containing 3, transcript variant X7
51. LAMTOR2 ENSGALG00000029881 35356 0.941 - - - - - - - 0.941 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
52. MGST1 ENSGALG00000013098 17632 0.94 - - - - - - - 0.940 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
53. NAA30 ENSGALG00000012098 4681 0.939 - - - - - - - 0.939 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
54. CSNK2A1 ENSGALG00000006197 41409 0.931 - - - - - - - 0.931 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
55. ACTR6 ENSGALG00000040976 31271 0.928 - - - - - - - 0.928 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
56. NSUN4 ENSGALG00000010360 3567 0.922 - - - - - - - 0.922 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
57. C11orf57 C11orf57 4971 0.919 - - - - - - - 0.919 - -
58. SPATA20 ENSGALG00000006857 3506 0.919 - - - - - - - 0.919 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
59. DERL1 ENSGALG00000033950 15074 0.914 - - - - - - - 0.914 - - derlin 1 [Source:NCBI gene;Acc:420350]
60. TIMM23B ENSGALG00000002089 8122 0.911 - - - - - - - 0.911 - - translocase of inner mitochondrial membrane 23 homolog B
61. MCM6 ENSGALG00000012348 12523 0.91 - - - - - - - 0.910 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
62. TMCO1 ENSGALG00000033460 22822 0.905 - - - - - - 0.905 - - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
63. RPL7L1 ENSGALG00000011974 20292 0.904 - - - - - - - 0.904 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
64. MED6 ENSGALG00000029743 9414 0.898 - - - - - - - 0.898 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
65. MYBL2 ENSGALG00000003503 15875 0.898 - - - - - - - 0.898 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
66. DHCR24 ENSGALG00000010798 3963 0.894 - - - - - - - 0.894 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
67. FARP1 ENSGALG00000016886 13132 0.894 - - - - - - - 0.894 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
68. LAPTM4A ENSGALG00000016479 15973 0.893 - - - - - - - 0.893 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
69. BLMH ENSGALG00000004259 36907 0.891 - - - - - - 0.891 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
70. ZNF367 ENSGALG00000012629 3215 0.891 - - - - - - - 0.891 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
71. HSPA12A ENSGALG00000009248 7783 0.889 - - - - - - - 0.889 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
72. ANP32E ENSGALG00000039891 35925 0.881 - - - - - - - 0.881 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
73. ENSGALG00000006463 ENSGALG00000006463 45151 0.88 - - - - - - 0.880 - - -
74. SOD1 ENSGALG00000015844 35836 0.872 - - - - - - 0.872 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
75. C C 7669 0.866 - - - - - - 0.866 - - -
76. MTAP ENSGALG00000008174 10976 0.86 - - - - - - 0.860 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
77. TAF15 ENSGALG00000002060 12320 0.86 - - - - - - - 0.860 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
78. PPFIA1 ENSGALG00000035774 5258 0.855 - - - 0.855 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
79. MCM5 ENSGALG00000012546 18254 0.853 - - - - - - 0.853 - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
80. PCNP ENSGALG00000015330 15750 0.852 - - - - - - 0.852 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
81. SEC11A ENSGALG00000037553 32123 0.85 - - - - - - 0.850 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
82. EIF1 ENSGALG00000028517 124882 0.848 - - - - - - - 0.848 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
83. RCN2 ENSGALG00000039284 17848 0.842 - - - - - - 0.842 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
84. NME6 ENSGALG00000038044 1231 0.841 - - - 0.841 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
85. MRPL20 ENSGALG00000001542 28764 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
86. TXNDC12 ENSGALG00000010569 13822 0.837 - - - - - - 0.837 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
87. MRPS30 ENSGALG00000014874 3416 0.835 - - - 0.835 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
88. PPP1R7 ENSGALG00000031766 22187 0.835 - - - - - - 0.835 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
89. CKAP4 ENSGALG00000012659 36398 0.833 - - - - - - - 0.833 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
90. PARP1 ENSGALG00000009228 39433 0.831 - - - - - - 0.831 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
91. RALB ENSGALG00000026493 14590 0.83 - - - - - - 0.830 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
92. ATP6V0B ENSGALG00000010091 14901 0.829 - - - - - - - 0.829 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
93. NDUFS8 ENSGALG00000040173 24745 0.829 - - - - - - 0.829 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
94. ZBTB17 ENSGALG00000035352 280 0.827 - - - 0.827 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
95. MLH3 ENSGALG00000010304 231 0.827 - - - 0.827 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
96. ENSGALG00000027412 ENSGALG00000027412 202 0.825 - - - 0.825 - - - - - -
97. HOXA7 ENSGALG00000026989 6746 0.824 - - - - - - 0.824 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
98. SNORA31 SNORA31 183 0.823 - - - 0.823 - - - - - -
99. PRELID1 ENSGALG00000002990 55592 0.823 - - - - - - 0.823 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
100. MYCBP ENSGALG00000024295 13273 0.823 - - - - - - 0.823 - - - MYC binding protein

There are 509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA