Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CPSF2

Gene Name Gene ID Reads Annotation
CPSF2 ENSGALG00000010783 5236 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]











Genes with expression patterns similar to CPSF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CPSF2 ENSGALG00000010783 5236 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
2. CDC73 ENSGALG00000002469 4586 2.471 - - 0.748 - - - 0.838 - - 0.885 cell division cycle 73 [Source:NCBI gene;Acc:424356]
3. UFD1L 12964 2.4 - - - - - - 0.896 0.801 - 0.703 ubiquitin fusion degradation 1 like (yeast)
4. ZFR ENSGALG00000003235 8466 1.81 - - - - - - 0.882 - - 0.928 zinc finger RNA binding protein, transcript variant X3
5. CETN1 ENSGALG00000026741 7243 1.791 - - - - - - 0.841 - - 0.950 centrin 1 [Source:NCBI gene;Acc:422668]
6. SUV39H2 ENSGALG00000013920 4360 1.781 - - - - - - 0.853 - - 0.928 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
7. MB21D1 2460 1.781 - - - - - - - 0.830 - 0.951 Mab-21 domain containing 1
8. RHOT1 ENSGALG00000003397 5149 1.761 - - - - - - - 0.839 - 0.922 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
9. MPRIP ENSGALG00000004798 6700 1.761 - - - - - - 0.815 - - 0.946 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
10. ANKRD17 ENSGALG00000011642 3192 1.759 - - - - - - - 0.828 - 0.931 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
11. RNF219 ENSGALG00000016911 4458 1.758 - - - - - - 0.840 - - 0.918 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
12. FANCB ENSGALG00000016569 1193 1.729 - - 0.850 - - - - - - 0.879 FA complementation group B [Source:NCBI gene;Acc:418628]
13. C1orf198 ENSGALG00000026600 5651 1.727 - - - - - - 0.804 - - 0.923 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
14. CHMP5 ENSGALG00000013160 13347 1.723 - - - - - - 0.848 - - 0.875 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
15. AFG3L2 ENSGALG00000013853 1138 1.719 - - 0.764 - - - - - - 0.955 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
16. ACAP2 ENSGALG00000007040 4182 1.693 - - - - - - - 0.833 - 0.860 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
17. FEN1 ENSGALG00000033781 16551 1.683 - - - - - - 0.860 0.823 - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
18. CCDC51 ENSGALG00000006465 1845 1.682 - - 0.751 - - - - - - 0.931 coiled-coil domain containing 51, transcript variant X1
19. CDKN2AIP ENSGALG00000010661 1218 1.675 - - 0.759 - - - - - - 0.916 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
20. LEPROT ENSGALG00000011047 7132 1.668 - - - - - - 0.855 - - 0.813 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
21. BRD1 ENSGALG00000029379 6047 1.664 - - - - - - 0.711 - - 0.953 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
22. C26H6ORF89 C26H6ORF89 1826 1.661 - - 0.716 - - - - - - 0.945
23. GGA.8379 GGA.8379 4419 1.648 - - - - - - 0.808 - - 0.840
24. PNRC2 ENSGALG00000004122 19228 1.639 - - - - - - 0.799 - - 0.840 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
25. CAMSAP2 ENSGALG00000002145 6109 1.638 - - - - - - 0.708 - - 0.930 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
26. PTP4A2 ENSGALG00000003265 24826 1.63 - - - - - - 0.797 - - 0.833 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
27. SYNGR2 ENSGALG00000027902 6953 1.629 - - - - - - 0.839 - - 0.790 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
28. CCNE2 ENSGALG00000040794 1229 1.629 - - - - - - 0.707 - - 0.922 cyclin E2 [Source:NCBI gene;Acc:420231]
29. RNF10 ENSGALG00000036417 8027 1.611 - - - - - - 0.822 0.789 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
30. SDF2L1 ENSGALG00000031982 6084 1.61 - - - - - - 0.810 - - 0.800 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
31. RRAGC ENSGALG00000033079 4966 1.608 - - 0.719 - - - - - - 0.889 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
32. HNRNPLL ENSGALG00000008504 14719 1.602 - - - - - - 0.816 - - 0.786 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
33. COPS2 ENSGALG00000000404 8980 1.597 - - - - - - 0.858 - - 0.739 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
34. SNRNP48 ENSGALG00000013005 1468 1.594 - - - - - - 0.716 - - 0.878 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
35. HTATSF1 ENSGALG00000006410 3526 1.582 - - 0.771 - - - 0.811 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
36. ACO2 ENSGALG00000011950 30387 1.58 - - - - - - 0.707 - - 0.873 aconitase 2 [Source:NCBI gene;Acc:374009]
37. TMEM115 ENSGALG00000026965 13050 1.579 - - - - - - 0.720 - - 0.859 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
38. CCNK ENSGALG00000011138 6416 1.57 - - - - - - 0.798 - - 0.772 cyclin K [Source:NCBI gene;Acc:423446]
39. IPO9 ENSGALG00000000397 9263 1.564 - - - - - - 0.779 0.785 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
40. KIDINS220 ENSGALG00000016409 854 1.557 - - 0.748 - - - - - - 0.809 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
41. GPS1 ENSGALG00000002827 8433 1.555 - - - - - - 0.766 - - 0.789 G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
42. GTPBP4 ENSGALG00000006703 16183 1.554 - - - - - - 0.836 - - 0.718 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
43. PACSIN3 ENSGALG00000008231 5423 1.548 - - - - - - - 0.810 - 0.738 protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
44. HELLS ENSGALG00000005451 7094 1.543 - - - - - - 0.726 - - 0.817 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
45. NDUFAF1 ENSGALG00000008587 14779 1.541 - - - - - - 0.767 - - 0.774 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
46. UBE2E3 ENSGALG00000020793 9517 1.538 - - - - - - 0.777 - - 0.761 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
47. NAP1L1 ENSGALG00000010238 14506 1.521 - - - - - - 0.704 - - 0.817 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
48. MRPL48 ENSGALG00000017319 9773 1.519 - - 0.715 - - - - 0.804 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
49. VAPB ENSGALG00000007549 15511 1.517 - - - - - - - 0.759 - 0.758 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
50. RBM19 ENSGALG00000008289 10702 1.51 - - - - - - 0.805 - - 0.705 RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
51. FBXW11 ENSGALG00000002229 5805 1.509 - - - - - - 0.762 - - 0.747 F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
52. NCOR1 ENSGALG00000004477 4534 1.509 - - - - - - 0.746 - - 0.763 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
53. LGALS1 ENSGALG00000012420 13993 1.505 - - - - - - - 0.803 - 0.702 galectin 1 [Source:NCBI gene;Acc:396491]
54. LOC776067 ENSGALG00000016808 9164 1.467 - - - - - - 0.721 - - 0.746 E3 SUMO-protein ligase RanBP2-like, transcript variant X50
55. CNI CNI 18453 1.467 - - - - - - 0.742 - - 0.725
56. PDS5A ENSGALG00000014286 13077 1.464 - - - - - - 0.763 - - 0.701 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
57. MTCH2 ENSGALG00000036196 15097 0.978 - - - - - - - 0.978 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
58. ITGB5 ENSGALG00000029766 5978 0.973 - - - - - - - 0.973 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
59. NARS ENSGALG00000040506 9506 0.966 - - - - - - - - - 0.966 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
60. PNPT1 ENSGALG00000043545 1306 0.966 - - - - - - - - - 0.966 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
61. HOTAIRM1 HOTAIRM1 4335 0.962 - - - - - - - - - 0.962
62. MESDC1 1013 0.961 - - - - - - - 0.961 - - mesoderm development candidate 1
63. APBA3 ENSGALG00000000740 1249 0.961 - - - - - - - - - 0.961 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
64. DCAF5 ENSGALG00000009463 1297 0.96 - - - - - - - - - 0.960 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
65. PROM1 ENSGALG00000014496 2494 0.96 - - - - - - - - - 0.960 prominin 1 [Source:NCBI gene;Acc:422825]
66. CRMP1B CRMP1B 18633 0.96 - - - - - - - 0.960 - -
67. CPNE1 ENSGALG00000040856 610 0.958 - - - - - - - - - 0.958 copine 1 [Source:NCBI gene;Acc:419134]
68. TMEM128 ENSGALG00000014992 6567 0.957 - - - - - - - - - 0.957 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
69. PREX2 ENSGALG00000042354 134 0.957 - - - - - - - - - 0.957 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
70. CP ENSGALG00000030773 119 0.956 - - - - - - - - - 0.956 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
71. HEXA ENSGALG00000043828 4789 0.956 - - - - - - - - - 0.956 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
72. TP53BP1 ENSGALG00000042201 708 0.956 - - - - - - - - - 0.956 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
73. ENSGALG00000009044 ENSGALG00000009044 14492 0.956 - - - - - - - - - 0.956
74. ZNF6 ZNF6 138 0.955 - - - - - - - - - 0.955
75. RTN4R ENSGALG00000007732 1515 0.955 - - - - - - - - - 0.955 reticulon 4 receptor
76. TXNDC11 ENSGALG00000003154 2224 0.955 - - - - - - - - - 0.955 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
77. STRADA ENSGALG00000000550 6912 0.955 - - - - - - - - - 0.955 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
78. C10orf118 C10orf118 762 0.954 - - - - - - - - - 0.954
79. CPNE2 ENSGALG00000001316 236 0.954 - - - - - - - - - 0.954 copine 2 [Source:NCBI gene;Acc:415646]
80. MTERFD1 MTERFD1 3640 0.953 - - - - - - - - - 0.953
81. IL10R2 IL10R2 72 0.953 - - - - - - - - - 0.953
82. FAM190B FAM190B 165 0.953 - - - - - - - - - 0.953
83. PM20D2 ENSGALG00000015779 1301 0.953 - - - - - - - - - 0.953 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
84. 5S_2 5S_2 58 0.953 - - - - - - - - - 0.953
85. CXADR ENSGALG00000015701 96 0.953 - - - - - - - - - 0.953 coxsackie virus and adenovirus receptor, transcript variant X2
86. SOX6 ENSGALG00000006074 102 0.952 - - - - - - - - - 0.952 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
87. ITSN2 ENSGALG00000016504 651 0.952 - - - - - - - - - 0.952 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
88. TANGO2 ENSGALG00000002056 1971 0.952 - - - - - - - - - 0.952 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
89. PCLO 249 0.952 - - - - - - - - - 0.952 piccolo presynaptic cytomatrix protein
90. FRMD3 ENSGALG00000012577 999 0.952 - - - - - - - - - 0.952 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
91. FASTKD3 ENSGALG00000033521 1186 0.951 - - - - - - - - - 0.951 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
92. AURKA ENSGALG00000007768 793 0.951 - - - - - - - - - 0.951 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
93. MSI1 ENSGALG00000007227 2279 0.951 - - - - - - - - - 0.951 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
94. CLSPN ENSGALG00000002346 2590 0.95 - - - - - - - - - 0.950 claspin [Source:NCBI gene;Acc:428223]
95. WDSUB1 ENSGALG00000012574 2038 0.95 - - - - - - - - - 0.950 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
96. SSH1 ENSGALG00000004928 222 0.95 - - - - - - - - - 0.950 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
97. MAN1A2 451 0.95 - - - - - - - - - 0.950 mannosidase alpha class 1A member 2
98. HAUS8 ENSGALG00000003727 351 0.949 - - - - - - - - - 0.949 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
99. C14orf80 C14orf80 1921 0.949 - - - - - - - - - 0.949
100. CCT8 ENSGALG00000015821 12161 0.949 - - - - - - - - - 0.949 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]

There are 922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA