Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CPEB1

Gene Name Gene ID Reads Annotation
CPEB1 ENSGALG00000002150 335 cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]











Genes with expression patterns similar to CPEB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CPEB1 ENSGALG00000002150 335 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
2. GPR20 ENSGALG00000041730 1926 1.555 - - - 0.711 - - - - 0.844 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
3. HBB HBB 7552 1.51 - - 0.803 - - - - 0.707 - -
4. MMRN2 770 1.469 - - 0.747 - - - - - 0.722 - multimerin 2, transcript variant X1
5. SLC9A7 ENSGALG00000016734 146 1.454 - - - - - - 0.720 - 0.734 - solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]
6. NPR2 ENSGALG00000027630 871 0.893 - - - 0.893 - - - - - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
7. FGF22 ENSGALG00000041822 37 0.888 - - 0.888 - - - - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
8. CAPN6 ENSGALG00000008006 16 0.877 - - 0.877 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
9. TPTE2 ENSGALG00000017031 29 0.877 - - 0.877 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
10. PLA1A ENSGALG00000014997 152 0.875 - - 0.875 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
11. TRAF3IP3 ENSGALG00000001373 11 0.875 - - 0.875 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
12. GATA4 ENSGALG00000016662 6 0.873 - - 0.873 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
13. VEPH1 ENSGALG00000009682 51 0.873 - - 0.873 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
14. DENND6B ENSGALG00000043771 22 0.873 - - 0.873 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
15. UIMC1 ENSGALG00000001158 22 0.868 - - 0.868 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
16. ZP2 ENSGALG00000002428 10 0.868 - - 0.868 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
17. ENDOV 121 0.866 - - - - - - - 0.866 - - endonuclease V
18. ENSGALG00000021386 ENSGALG00000021386 29 0.863 - - 0.863 - - - - - - -
19. KNDC1 ENSGALG00000007007 31 0.863 - - 0.863 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
20. TICRR ENSGALG00000006631 495 0.862 - - - - - - - - 0.862 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
21. ENSGALG00000027849 ENSGALG00000027849 320 0.859 - - - - - - - - 0.859 -
22. SCN4B ENSGALG00000007409 22 0.857 - - 0.857 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
23. CDCP1 ENSGALG00000040447 47 0.856 - - 0.856 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
24. RHOBTB1 ENSGALG00000003073 56 0.856 - - - - - - - 0.856 - - Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
25. CACNG2 ENSGALG00000031977 196 0.855 - - - - - - - 0.855 - - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
26. TEX11 ENSGALG00000005775 58 0.854 - - 0.854 - - - - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
27. CENPQ ENSGALG00000016692 293 0.854 - - 0.854 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
28. HSD3B2 HSD3B2 55 0.853 - - 0.853 - - - - - - -
29. ICMT ENSGALG00000024053 10 0.85 - - 0.850 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
30. FST ENSGALG00000014908 3182 0.848 - - - - - - - - 0.848 - follistatin [Source:NCBI gene;Acc:396119]
31. HDAC3 ENSGALG00000002634 130 0.848 - - 0.848 - - - - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
32. STX19 ENSGALG00000015413 28 0.847 - - 0.847 - - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
33. FADD ENSGALG00000007625 142 0.847 - - 0.847 - - - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
34. ZBTB25 ENSGALG00000028942 21 0.846 - - 0.846 - - - - - - - zinc finger and BTB domain containing 25 [Source:HGNC Symbol;Acc:HGNC:13112]
35. C1orf168 C1orf168 98 0.845 - - 0.845 - - - - - - -
36. ABCC13 ENSGALG00000015675 66 0.843 - - 0.843 - - - - - - - ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
37. MPP7 ENSGALG00000007408 2485 0.843 - - - - - - - - 0.843 - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
38. CACNA1D ENSGALG00000005332 34 0.841 - - 0.841 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
39. N4BP2L1 ENSGALG00000017072 1371 0.839 - - 0.839 - - - - - - - NEDD4 binding protein 2 like 1, transcript variant X2
40. FUK ENSGALG00000002648 9 0.839 - - 0.839 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
41. LOC100857512 ENSGALG00000026070 561 0.837 - - 0.837 - - - - - - - death-associated protein kinase 2-like, transcript variant X2
42. PLEKHA1 ENSGALG00000034548 34 0.837 - - 0.837 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
43. ENSGALG00000010336 ENSGALG00000010336 16 0.833 - - - 0.833 - - - - - -
44. LRIG1 ENSGALG00000007483 19 0.829 - - 0.829 - - - - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
45. ELMOD2 ENSGALG00000009836 177 0.829 - - 0.829 - - - - - - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
46. PAQR8 ENSGALG00000016675 85 0.826 - - - - - - 0.826 - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
47. GRIN2A ENSGALG00000007278 17 0.825 - - - 0.825 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
48. SNORD35 SNORD35 366 0.824 - - - 0.824 - - - - - -
49. FAM26E 37 0.824 - - 0.824 - - - - - - - family with sequence similarity 26 member E
50. MAP3K2 42 0.824 - - - - - - - - 0.824 - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
51. MVK ENSGALG00000013848 239 0.823 - - 0.823 - - - - - - - mevalonate kinase [Source:HGNC Symbol;Acc:HGNC:7530]
52. DLEC1 ENSGALG00000005826 23 0.823 - - 0.823 - - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
53. KIAA1841 ENSGALG00000007825 22 0.821 - - 0.821 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
54. CRAT ENSGALG00000037443 78 0.821 - - 0.821 - - - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
55. C1QL1 ENSGALG00000028031 788 0.82 - - - - - - - - 0.820 - complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]
56. SP2 ENSGALG00000000233 43 0.819 - - 0.819 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
57. RPLP1 ENSGALG00000030878 445592 0.819 - - - 0.819 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
58. SLITRK4 ENSGALG00000007242 165 0.817 - - 0.817 - - - - - - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
59. AIM1 51 0.817 - - - 0.817 - - - - - - absent in melanoma 1, transcript variant X2
60. DYRK1A ENSGALG00000016053 345 0.816 - - - - - - - 0.816 - - dual specificity tyrosine phosphorylation regulated kinase 1A [Source:NCBI gene;Acc:395233]
61. CRK ENSGALG00000002656 15 0.816 - - 0.816 - - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
62. C8B ENSGALG00000010853 21 0.815 - - - 0.815 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
63. PTPN13 ENSGALG00000011078 62 0.815 - - 0.815 - - - - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
64. MMR1L3 ENSGALG00000008638 26 0.815 - - - 0.815 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
65. BFIV21 BFIV21 30 0.815 - - - 0.815 - - - - - -
66. RYR2 ENSGALG00000010812 95 0.811 - - - 0.811 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
67. PROC ENSGALG00000001780 26 0.811 - - - 0.811 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
68. RAD51B ENSGALG00000009491 199 0.811 - - - 0.811 - - - - - - RAD51 paralog B [Source:HGNC Symbol;Acc:HGNC:9822]
69. LSM14B ENSGALG00000005125 31 0.81 - - 0.810 - - - - - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
70. EX-FABP EX-FABP 516 0.808 - - - - - - - - 0.808 -
71. CUBN ENSGALG00000008704 21 0.808 - - - 0.808 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
72. TASP1 ENSGALG00000009057 1295 0.805 - - 0.805 - - - - - - - taspase 1 [Source:NCBI gene;Acc:416741]
73. LMCD1 ENSGALG00000008349 928 0.804 - - 0.804 - - - - - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
74. CFAP74 ENSGALG00000001288 54 0.804 - - - 0.804 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
75. XPC ENSGALG00000006357 2484 0.804 - - - - - - - - 0.804 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
76. VPS45 ENSGALG00000013899 154 0.803 - - - 0.803 - - - - - - vacuolar protein sorting 45 homolog [Source:NCBI gene;Acc:430741]
77. ENSGALG00000017589 ENSGALG00000017589 36 0.803 - - 0.803 - - - - - - -
78. UBAC1 ENSGALG00000042564 598 0.803 - - 0.803 - - - - - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
79. WNK1 ENSGALG00000012992 67 0.802 - - 0.802 - - - - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
80. PHLPP1 ENSGALG00000012888 398 0.801 - - - - - - - - 0.801 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
81. ENSGALG00000026913 ENSGALG00000026913 12 0.8 - - - - - 0.800 - - - -
82. PAK2 ENSGALG00000006426 283 0.8 - - - - - - - - 0.800 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
83. NAPG ENSGALG00000013932 67 0.8 - - 0.800 - - - - - - - NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
84. TMC7 ENSGALG00000006889 125 0.799 - - - 0.799 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
85. GRID1 ENSGALG00000037366 159 0.798 - - 0.798 - - - - - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
86. EPB41L4A ENSGALG00000000234 113 0.798 - - - 0.798 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
87. GPATCH8 ENSGALG00000041556 484 0.797 - - - - - - - - 0.797 - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]
88. MMRN1 ENSGALG00000010391 997 0.796 - - 0.796 - - - - - - - multimerin 1 [Source:HGNC Symbol;Acc:HGNC:7178]
89. ZCCHC4 ENSGALG00000036621 625 0.795 - - 0.795 - - - - - - - zinc finger CCHC-type containing 4 [Source:HGNC Symbol;Acc:HGNC:22917]
90. RLF ENSGALG00000000862 586 0.795 - - - - - - - - 0.795 - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
91. ATXN3 ENSGALG00000010766 48 0.795 - - - 0.795 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
92. TRDN ENSGALG00000014848 130 0.794 - - - - - - - - 0.794 - triadin
93. CHDH ENSGALG00000005363 910 0.794 - - - - - - - - 0.794 - choline dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24288]
94. ANKRD28 ENSGALG00000011226 160 0.792 - - - 0.792 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
95. MRPS14 ENSGALG00000030028 1987 0.791 - - - 0.791 - - - - - - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
96. VWA2 ENSGALG00000008980 52 0.79 - - 0.790 - - - - - - - von Willebrand factor A domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24709]
97. ERCC4 ENSGALG00000002981 1178 0.79 - - - - - - - - 0.790 - Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
98. METTL4 ENSGALG00000014799 411 0.788 - - - - - - - - 0.788 - methyltransferase like 4 [Source:HGNC Symbol;Acc:HGNC:24726]
99. KIF1B ENSGALG00000002726 461 0.787 - - - 0.787 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
100. BNIP1 ENSGALG00000002882 1091 0.786 - - - 0.786 - - - - - - BCL2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:1082]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA