Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COX4I1

Gene Name Gene ID Reads Annotation
COX4I1 68632 cytochrome c oxidase subunit 4I1, transcript variant X1











Genes with expression patterns similar to COX4I1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COX4I1 68632 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytochrome c oxidase subunit 4I1, transcript variant X1
2. DNAJC2 ENSGALG00000008249 28064 1.843 - - - - 0.849 - 0.994 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
3. NOL6 ENSGALG00000030730 7191 1.824 - - - - 0.847 - 0.977 - - - nucleolar protein 6
4. CCDC85A ENSGALG00000043080 7624 1.774 - - - - - - 0.992 - - 0.782 coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
5. UQCR11 ENSGALG00000001096 25245 1.721 - - - - - - 0.995 - - 0.726 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
6. ETF1 ENSGALG00000002262 14560 1.679 - - - - 0.844 - 0.835 - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
7. SMC3 ENSGALG00000008585 16618 1.669 - - - - 0.838 - 0.831 - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
8. CWC22 ENSGALG00000009001 5984 1.631 - - - - 0.849 - - - - 0.782 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
9. PAPOLA ENSGALG00000033099 20532 0.997 - - - - - - 0.997 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
10. PTP4A1 ENSGALG00000016271 23953 0.996 - - - - - - 0.996 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
11. DHX15 ENSGALG00000014395 24041 0.996 - - - - - - 0.996 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
12. PLK1 ENSGALG00000006110 12892 0.995 - - - - - - 0.995 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
13. ALYREF ENSGALG00000007237 48479 0.995 - - - - - - 0.995 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
14. UTRN ENSGALG00000012256 9980 0.994 - - - - - - 0.994 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
15. ENSGALG00000002595 ENSGALG00000002595 32163 0.994 - - - - - - 0.994 - - -
16. TXNRD3 ENSGALG00000039363 8016 0.993 - - - - - - 0.993 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
17. ATOX1 ENSGALG00000004176 16486 0.993 - - - - - - 0.993 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
18. FAM63A 8470 0.993 - - - - - - 0.993 - - - family with sequence similarity 63 member A, transcript variant X2
19. CCNG1 ENSGALG00000001718 9873 0.993 - - - - - - 0.993 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
20. SFRP1 ENSGALG00000003473 5917 0.992 - - - - - - 0.992 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
21. GCSH ENSGALG00000032679 29231 0.992 - - - - - - 0.992 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
22. ETFA ENSGALG00000002925 24053 0.992 - - - - - - 0.992 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
23. ENSGALG00000016007 ENSGALG00000016007 62448 0.992 - - - - - - 0.992 - - -
24. COQ9 ENSGALG00000001184 10174 0.992 - - - - - - 0.992 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
25. C5H11ORF58 C5H11ORF58 36659 0.991 - - - - - - 0.991 - - -
26. TOMM70A TOMM70A 24085 0.991 - - - - - - 0.991 - - -
27. ZFP161 ZFP161 3538 0.991 - - - - - - 0.991 - - -
28. GSTA GSTA 3130 0.991 - - - - - - 0.991 - - -
29. ENSGALG00000007210 ENSGALG00000007210 2203 0.99 - - - - - - 0.990 - - -
30. SUMO1 ENSGALG00000008435 19847 0.99 - - - - - - 0.990 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
31. FIG4 ENSGALG00000015070 3018 0.99 - - - - - - 0.990 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
32. LGALS3 ENSGALG00000012173 3306 0.99 - - - - - - 0.990 - - - galectin 3 [Source:NCBI gene;Acc:373917]
33. YWHAB ENSGALG00000004143 40276 0.985 - - - - - - 0.985 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
34. PAK1IP1 ENSGALG00000012724 10907 0.985 - - - - - - 0.985 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
35. C5ORF13 C5ORF13 50177 0.982 - - - - - - 0.982 - - -
36. ZMAT2 ENSGALG00000041746 23601 0.946 - - - - 0.946 - - - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
37. gga-mir-3526 ENSGALG00000029121 41375 0.943 - - - - - - 0.943 - - - gga-mir-3526 [Source:miRBase;Acc:MI0015377]
38. SUCLG1 ENSGALG00000015961 14323 0.94 - - - - - - 0.940 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
39. AZIN1 ENSGALG00000029295 11085 0.937 - - - - 0.937 - - - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
40. VHL ENSGALG00000028009 25009 0.932 - - - - 0.932 - - - - - von Hippel-Lindau tumor suppressor, transcript variant X1
41. TCOF1 ENSGALG00000005535 24554 0.922 - - - - - - 0.922 - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
42. SNX12 ENSGALG00000005659 9503 0.921 - - - - 0.921 - - - - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
43. ACO1 ENSGALG00000002162 6645 0.92 - - - - 0.920 - - - - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
44. WBP11 ENSGALG00000011745 11182 0.916 - - - - 0.916 - - - - - WW domain binding protein 11, transcript variant X1
45. MRPL42 ENSGALG00000011293 15145 0.911 - - - - 0.911 - - - - - mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
46. LOC419404 ENSGALG00000021676 12078 0.874 - - - - - - 0.874 - - - uncharacterized LOC419404
47. HMGB1 ENSGALG00000042875 83509 0.865 - - - - - - 0.865 - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
48. TNPO3 ENSGALG00000039420 5178 0.859 - - - - 0.859 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
49. UQCRC2 ENSGALG00000002490 23477 0.857 - - - - 0.857 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
50. EPB41L1 ENSGALG00000034171 3616 0.856 - - - - 0.856 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
51. C15H12ORF49 C15H12ORF49 13250 0.856 - - - - 0.856 - - - - -
52. KCTD9 ENSGALG00000000275 3455 0.856 - - - - 0.856 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
53. LCLAT1 ENSGALG00000009056 5207 0.855 - - - - 0.855 - - - - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
54. IBA57 ENSGALG00000005328 4362 0.855 - - - - 0.855 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
55. VPS8 ENSGALG00000006704 5419 0.855 - - - - 0.855 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
56. RILPL2 ENSGALG00000003321 5632 0.854 - - - - 0.854 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
57. SPG21 ENSGALG00000007262 8050 0.854 - - - - 0.854 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
58. RAE1 ENSGALG00000007653 8930 0.853 - - - - 0.853 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
59. HYOU1 ENSGALG00000007659 3555 0.853 - - - - 0.853 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
60. WHSC1L1 4065 0.853 - - - - 0.853 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
61. HTRA3 ENSGALG00000034673 512 0.853 - - - - 0.853 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
62. AGPAT3 ENSGALG00000031932 6903 0.853 - - - - 0.853 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
63. ABCC1 ENSGALG00000006646 2596 0.853 - - - - 0.853 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
64. MRPL46 ENSGALG00000006782 5033 0.853 - - - - 0.853 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
65. gga-mir-6584 ENSGALG00000028834 1481 0.852 - - - - 0.852 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
66. HMGB3 ENSGALG00000009071 12011 0.852 - - - - 0.852 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
67. UBE2G2 ENSGALG00000005667 12689 0.852 - - - - 0.852 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
68. BCL9 ENSGALG00000037655 4620 0.852 - - - - 0.852 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
69. TRIM33 ENSGALG00000001976 7404 0.85 - - - - 0.850 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
70. RBM26 ENSGALG00000016910 13769 0.85 - - - - 0.850 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
71. THBS1 ENSGALG00000009626 3521 0.85 - - - - 0.850 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
72. NDST2 ENSGALG00000005107 4224 0.85 - - - - 0.850 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
73. USP1 ENSGALG00000010957 8297 0.85 - - - - 0.850 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
74. MAP1B ENSGALG00000014999 6288 0.85 - - - - 0.850 - - - - - microtubule associated protein 1B
75. RAB21 ENSGALG00000010183 7718 0.85 - - - - 0.850 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
76. PPAPDC1B PPAPDC1B 6698 0.849 - - - - 0.849 - - - - -
77. MYEOV2 MYEOV2 5155 0.849 - - - - 0.849 - - - - -
78. MRPL22 ENSGALG00000003919 2760 0.848 - - - - 0.848 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
79. TBC1D7 ENSGALG00000012731 4891 0.848 - - - - 0.848 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
80. TBRG4 ENSGALG00000038102 9269 0.848 - - - - 0.848 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
81. RNF113A ENSGALG00000000538 3985 0.847 - - - - 0.847 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
82. SEC63 ENSGALG00000015308 11596 0.847 - - - - 0.847 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
83. LUC7L2 ENSGALG00000036238 11817 0.847 - - - - 0.847 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
84. ZEB1 ENSGALG00000007260 9277 0.846 - - - - 0.846 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
85. SAMM50 ENSGALG00000014194 20437 0.846 - - - - 0.846 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
86. MED1 ENSGALG00000001708 9556 0.846 - - - - 0.846 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
87. NSG1 ENSGALG00000015010 5829 0.845 - - - - 0.845 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
88. PSMD14 ENSGALG00000011128 13335 0.845 - - - - 0.845 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
89. CENPE ENSGALG00000013208 12337 0.845 - - - - 0.845 - - - - - centromere protein E, transcript variant X4
90. SEC61A2 ENSGALG00000036300 4235 0.845 - - - - 0.845 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
91. CDC5L ENSGALG00000016704 22893 0.844 - - - - 0.844 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
92. CCDC59 ENSGALG00000028648 9272 0.844 - - - - 0.844 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
93. TMEM39B ENSGALG00000003287 4125 0.844 - - - - 0.844 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
94. OPTC ENSGALG00000003554 3698 0.844 - - - - 0.844 - - - - - opticin [Source:NCBI gene;Acc:395130]
95. PHKA1 ENSGALG00000004801 2510 0.844 - - - - 0.844 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
96. MRPS11 ENSGALG00000006777 16009 0.844 - - - - 0.844 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
97. TCEB1 TCEB1 17818 0.843 - - - - - - 0.843 - - -
98. M6PR ENSGALG00000031681 9442 0.843 - - - - 0.843 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
99. C4orf27 C4orf27 16724 0.843 - - - - 0.843 - - - - -
100. TMEM18 ENSGALG00000028744 11779 0.843 - - - - 0.843 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]

There are 209 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA