Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPS4

Gene Name Gene ID Reads Annotation
COPS4 ENSGALG00000011130 21515 COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]











Genes with expression patterns similar to COPS4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPS4 ENSGALG00000011130 21515 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
2. NUDC ENSGALG00000000895 17844 2.247 - - - - 0.710 - - 0.779 - 0.758 nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
3. PSMC2 ENSGALG00000008236 25980 1.726 - - - - 0.835 - 0.891 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
4. DDX55 ENSGALG00000003298 2315 1.67 - - - - 0.910 - - 0.760 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
5. NAA25 ENSGALG00000041821 12729 1.663 - - - - 0.858 - 0.805 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
6. MRPL17 ENSGALG00000002605 46508 1.605 - - - - 0.876 - - 0.729 - - mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
7. MAGOH 28688 1.604 - - - - - - 0.878 - 0.726 - mago homolog, exon junction complex core component
8. SKP2 ENSGALG00000003547 14637 1.592 - - - - 0.867 - - 0.725 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
9. LARP1 ENSGALG00000040109 14808 1.585 - - - - 0.861 - 0.724 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
10. TCP1 ENSGALG00000011637 73216 1.559 - - - - 0.759 - 0.800 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
11. EMC8 ENSGALG00000005744 9422 0.946 - - - - - - - 0.946 - - ER membrane protein complex subunit 8
12. AKAP7 ENSGALG00000029794 3287 0.933 - - - - - - - 0.933 - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
13. PTBP1 ENSGALG00000001962 66983 0.924 - - - - - - 0.924 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
14. CHCHD2 ENSGALG00000002495 99536 0.92 - - - - 0.920 - - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
15. YY1 ENSGALG00000017388 1933 0.92 - - - - 0.920 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
16. CDC42 ENSGALG00000004796 59878 0.917 - - - - 0.917 - - - - - cell division cycle 42 [Source:NCBI gene;Acc:395917]
17. TRAPPC12 ENSGALG00000016387 2593 0.912 - - - - 0.912 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
18. REST 2394 0.912 - - - - 0.912 - - - - - RE1 silencing transcription factor
19. SSPN ENSGALG00000014042 638 0.912 - - - - 0.912 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
20. IGF1R ENSGALG00000040651 772 0.912 - - - - 0.912 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
21. AIRC AIRC 15851 0.912 - - - - - - 0.912 - - -
22. ENSGALG00000011687 ENSGALG00000011687 4553 0.912 - - - - 0.912 - - - - -
23. XPO7 ENSGALG00000001838 1875 0.912 - - - - 0.912 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
24. CTSZ ENSGALG00000007462 630 0.912 - - - - 0.912 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
25. SH2D3C ENSGALG00000005036 5101 0.911 - - - - 0.911 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
26. ELL2 ENSGALG00000014678 1111 0.911 - - - - 0.911 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
27. POLR3F ENSGALG00000008749 5645 0.91 - - - - 0.910 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
28. ZBTB10 ENSGALG00000034376 3271 0.91 - - - - 0.910 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
29. EAPP ENSGALG00000010007 5080 0.909 - - - - 0.909 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
30. GPN3 ENSGALG00000003807 6320 0.908 - - - - 0.908 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
31. DNAJC12 ENSGALG00000002769 1418 0.908 - - - - 0.908 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
32. RAB11A ENSGALG00000007615 9154 0.907 - - - - 0.907 - - - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
33. KNOP1 ENSGALG00000002042 6251 0.907 - - - - 0.907 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
34. COIL ENSGALG00000003158 7806 0.906 - - - - 0.906 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
35. BAG4 ENSGALG00000003254 5751 0.906 - - - - 0.906 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
36. MKI67 ENSGALG00000025996 28136 0.905 - - - - 0.905 - - - - - marker of proliferation Ki-67, transcript variant X3
37. LATS2 4776 0.904 - - - - 0.904 - - - - - large tumor suppressor kinase 2
38. CDC42SE2 ENSGALG00000027258 4725 0.904 - - - - 0.904 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
39. AATF ENSGALG00000005420 6501 0.904 - - - - 0.904 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
40. TLCD1 ENSGALG00000003973 17569 0.903 - - - - 0.903 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
41. CZH9ORF41 CZH9ORF41 3492 0.903 - - - - 0.903 - - - - -
42. WDR82 ENSGALG00000025904 4783 0.903 - - - - 0.903 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
43. SSR2 ENSGALG00000000764 32190 0.903 - - - - 0.903 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
44. TCP11L1 ENSGALG00000011688 2427 0.903 - - - - 0.903 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
45. CBWD1 ENSGALG00000010147 2765 0.903 - - - - 0.903 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
46. EIF3D ENSGALG00000012529 40887 0.903 - - - - 0.903 - - - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
47. RABEP1 ENSGALG00000001737 2650 0.903 - - - - 0.903 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
48. PLAA ENSGALG00000001782 5459 0.902 - - - - 0.902 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
49. FH ENSGALG00000013165 13669 0.902 - - - - 0.902 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
50. CSNK1G1 ENSGALG00000030812 31618 0.901 - - - - 0.901 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
51. NFASC ENSGALG00000031776 4264 0.9 - - - - 0.900 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
52. NAP1L1 ENSGALG00000010238 14506 0.9 - - - - 0.900 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
53. MRPS27 ENSGALG00000015002 6541 0.899 - - - - 0.899 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
54. SIRT1 ENSGALG00000002761 9028 0.898 - - - - 0.898 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
55. ATG5 ENSGALG00000015387 7752 0.898 - - - - 0.898 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
56. DRAXIN ENSGALG00000004631 3122 0.898 - - - - 0.898 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
57. IGBP1 ENSGALG00000044628 9200 0.898 - - - - 0.898 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
58. COMMD8 ENSGALG00000026279 13509 0.898 - - - - 0.898 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
59. FERMT2 ENSGALG00000012425 5480 0.898 - - - - 0.898 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
60. TMEM165 ENSGALG00000027886 5468 0.897 - - - - 0.897 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
61. IGDCC4 ENSGALG00000007410 5457 0.897 - - - - 0.897 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
62. SHROOM2 ENSGALG00000030802 4517 0.896 - - - - 0.896 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
63. TLK2 ENSGALG00000000410 4690 0.896 - - - - 0.896 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
64. RAB12 ENSGALG00000033608 14160 0.896 - - - - 0.896 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
65. STK3 ENSGALG00000032850 6339 0.895 - - - - 0.895 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
66. REEP5 ENSGALG00000023157 6282 0.894 - - - - 0.894 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
67. PUM1 ENSGALG00000042598 9392 0.894 - - - - 0.894 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
68. POLR2B ENSGALG00000011387 4864 0.894 - - - - 0.894 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
69. MRPL23 ENSGALG00000006561 13737 0.894 - - - - 0.894 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
70. FBXO9 ENSGALG00000016320 9600 0.893 - - - - 0.893 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
71. MRPS25 ENSGALG00000008506 12131 0.89 - - - - 0.890 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
72. SAR1B ENSGALG00000038753 6493 0.89 - - - - 0.890 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
73. ENSGALG00000014852 ENSGALG00000014852 15288 0.889 - - - - 0.889 - - - - -
74. PTTG1 17936 0.889 - - - - 0.889 - - - - - pituitary tumor-transforming 1, transcript variant X1
75. MAEA ENSGALG00000013310 13230 0.887 - - - - 0.887 - - - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
76. EXO1 ENSGALG00000010748 7572 0.884 - - - - 0.884 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
77. PSPC1 ENSGALG00000017142 13036 0.883 - - - - 0.883 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
78. PTPN12 9302 0.882 - - - - 0.882 - - - - - protein tyrosine phosphatase, non-receptor type 12
79. SFSWAP ENSGALG00000002487 9977 0.881 - - - - 0.881 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
80. FAM96B 14435 0.881 - - - - - - 0.881 - - - family with sequence similarity 96 member B
81. TK2 ENSGALG00000034216 5394 0.881 - - - - 0.881 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
82. RANGAP1 ENSGALG00000011966 20170 0.88 - - - - 0.880 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
83. MRPL19 ENSGALG00000016731 22670 0.88 - - - - - - 0.880 - - - mitochondrial ribosomal protein L19, transcript variant X1
84. STRAP ENSGALG00000013092 13100 0.88 - - - - 0.880 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
85. PPA1 ENSGALG00000004442 33355 0.876 - - - - 0.876 - - - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
86. PCBP4 ENSGALG00000027695 7937 0.875 - - - - 0.875 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
87. NOP58 ENSGALG00000008454 34630 0.874 - - - - 0.874 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
88. KERA ENSGALG00000011270 4204 0.872 - - - - 0.872 - - - - - keratocan [Source:NCBI gene;Acc:373995]
89. CREPT CREPT 17142 0.872 - - - - - - 0.872 - - -
90. ENSGALG00000007509 ENSGALG00000007509 18441 0.872 - - - - - - 0.872 - - -
91. RCAN3 ENSGALG00000004282 7778 0.87 - - - - 0.870 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
92. ACO2 ENSGALG00000011950 30387 0.869 - - - - - - 0.869 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
93. RPL24 ENSGALG00000015339 227460 0.867 - - - - 0.867 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
94. KPNA3 ENSGALG00000017009 17330 0.867 - - - - 0.867 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
95. MINOS1 ENSGALG00000004039 37740 0.866 - - - - - - 0.866 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
96. TOP2B ENSGALG00000011300 25048 0.863 - - - - - - 0.863 - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
97. CCT4 ENSGALG00000008812 78267 0.861 - - - - 0.861 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
98. GFPT1 ENSGALG00000036391 14025 0.86 - - - - 0.860 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
99. MGST1 ENSGALG00000013098 17632 0.86 - - - - - - 0.860 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
100. ADD3 ENSGALG00000008542 13814 0.86 - - - - 0.860 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA