Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPS3

Gene Name Gene ID Reads Annotation
COPS3 ENSGALG00000004834 16012 COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]











Genes with expression patterns similar to COPS3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPS3 ENSGALG00000004834 16012 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
2. GOT2 ENSGALG00000002321 4961 1.827 - - - - - - - 0.963 - 0.864 glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
3. MRPS31 ENSGALG00000017033 9287 1.789 - - - - - - - 0.966 - 0.823 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
4. ACO2 ENSGALG00000011950 30387 1.775 - - - - - - - 0.928 - 0.847 aconitase 2 [Source:NCBI gene;Acc:374009]
5. KCNK5 ENSGALG00000034077 3233 1.692 - - - - - - - 0.962 - 0.730 potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
6. UQCR11 ENSGALG00000001096 25245 1.663 - - - - - - - 0.795 - 0.868 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
7. SVIL ENSGALG00000007331 12032 1.569 - - - - - - - 0.754 - 0.815 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
8. UBP1 ENSGALG00000035630 13359 1.54 - - - - - - 0.721 0.819 - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
9. PSMA3 ENSGALG00000012039 26539 1.511 - - - - - - 0.718 - - 0.793 proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
10. HSPA8 ENSGALG00000006512 124825 1.41 - - 0.700 - - - - - - 0.710 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
11. MFF ENSGALG00000003079 5289 0.967 - - - - - - - 0.967 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
12. CAPZA1 ENSGALG00000001547 24242 0.966 - - - - - - - 0.966 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
13. SHROOM2 ENSGALG00000030802 4517 0.966 - - - - - - - 0.966 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
14. MRPS7 ENSGALG00000007999 5445 0.966 - - - - - - - 0.966 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
15. OTUD4 ENSGALG00000009968 3919 0.965 - - - - - - - 0.965 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
16. KPNA1 ENSGALG00000014426 2724 0.965 - - - - - - - 0.965 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
17. GNG10 ENSGALG00000015683 6905 0.965 - - - - - - - 0.965 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
18. LGMN ENSGALG00000010811 7401 0.965 - - - - - - - 0.965 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
19. CEP192 ENSGALG00000035625 2270 0.965 - - - - - - - 0.965 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
20. CCDC167 ENSGALG00000010151 3567 0.965 - - - - - - - 0.965 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
21. LYRM4 ENSGALG00000027339 2917 0.964 - - - - - - - 0.964 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
22. WDR91 ENSGALG00000011724 5787 0.964 - - - - - - - 0.964 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
23. FAM122A ENSGALG00000006127 9630 0.963 - - - - - - - 0.963 - - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
24. PM20D1 ENSGALG00000000724 2108 0.963 - - - - - - - 0.963 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
25. TCTEX1D2 ENSGALG00000027722 2201 0.963 - - - - - - - 0.963 - - Tctex1 domain containing 2
26. PHLDA2 ENSGALG00000032687 7733 0.963 - - - - - - - 0.963 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
27. POLR3H ENSGALG00000011947 2899 0.963 - - - - - - - 0.963 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
28. RFC4 ENSGALG00000008703 5842 0.962 - - - - - - - 0.962 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
29. TNPO3 ENSGALG00000039420 5178 0.962 - - - - - - - 0.962 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
30. NOVA1 ENSGALG00000009850 7584 0.962 - - - - - - - 0.962 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
31. EPM2A ENSGALG00000012275 872 0.962 - - - - - - - 0.962 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
32. ATG12 ENSGALG00000002345 3607 0.962 - - - - - - - 0.962 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
33. C26H6ORF106 C26H6ORF106 2168 0.962 - - - - - - - 0.962 - -
34. PRKAR2A ENSGALG00000007023 909 0.962 - - - - - - - 0.962 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
35. TNFRSF11B ENSGALG00000043167 911 0.962 - - - - - - - 0.962 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
36. IDI1 ENSGALG00000006723 7761 0.962 - - - - - - - 0.962 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
37. ARFGAP3 ENSGALG00000014140 4612 0.961 - - - - - - - 0.961 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
38. CLIP1 ENSGALG00000004467 1058 0.961 - - - - - - - 0.961 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
39. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.961 - - - - - - - 0.961 - -
40. TLE3 ENSGALG00000008120 2655 0.961 - - - - - - - 0.961 - - transducin like enhancer of split 3, transcript variant X10
41. EEFSEC ENSGALG00000038684 298 0.96 - - - - - - - 0.960 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
42. COL14A1 ENSGALG00000037675 2652 0.96 - - - - - - - 0.960 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
43. B9D1 ENSGALG00000005096 760 0.96 - - - - - - - 0.960 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
44. ELMO2 ENSGALG00000007246 4569 0.96 - - - - - - - 0.960 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
45. BMP5 ENSGALG00000016293 2119 0.96 - - - - - - - 0.960 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
46. SGCE ENSGALG00000009670 3070 0.959 - - - - - - - 0.959 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
47. RAB24 ENSGALG00000002984 6264 0.958 - - - - - - - 0.958 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
48. ENSGALG00000002595 ENSGALG00000002595 32163 0.956 - - - - - - - 0.956 - -
49. ISCA1 ENSGALG00000012606 10342 0.956 - - - - - - - 0.956 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
50. BRMS1L ENSGALG00000010093 4964 0.956 - - - - - - - 0.956 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
51. SLC25A14 ENSGALG00000004063 5574 0.955 - - - - - - - 0.955 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
52. PTP4A1 ENSGALG00000016271 23953 0.955 - - - - - - - 0.955 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
53. FAM136A ENSGALG00000042163 39487 0.954 - - - - - - - 0.954 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
54. MAP2 ENSGALG00000002789 6597 0.954 - - - - - - - 0.954 - - microtubule associated protein 2, transcript variant X33
55. RPB6 RPB6 9517 0.954 - - - - - - - 0.954 - -
56. UPF3B ENSGALG00000008618 12350 0.953 - - - - - - - 0.953 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
57. BDH1_1 ENSGALG00000023601 6109 0.952 - - - - - - - 0.952 - - 3-hydroxybutyrate dehydrogenase, type 1
58. PDIA5 ENSGALG00000011689 6913 0.952 - - - - - - - 0.952 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
59. HHIP ENSGALG00000009948 1536 0.952 - - - - - - - 0.952 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
60. ATPAF1 ENSGALG00000010444 3677 0.95 - - - - - - - 0.950 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
61. CYB5B ENSGALG00000000660 9733 0.95 - - - - - - - 0.950 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
62. NMD3 ENSGALG00000009533 8726 0.949 - - - - - - - 0.949 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
63. L3HYPDH ENSGALG00000012011 2212 0.948 - - - - - - - 0.948 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
64. TRMT10A ENSGALG00000012264 2467 0.947 - - - - - - - 0.947 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
65. ARID4A ENSGALG00000012037 8554 0.947 - - - - - - - 0.947 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
66. UBE2F ENSGALG00000003812 13874 0.947 - - - - - - - 0.947 - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
67. TRIM9 ENSGALG00000012367 1267 0.946 - - - - - - - 0.946 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
68. SERPINH1 ENSGALG00000011214 15311 0.946 - - - - - - - 0.946 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
69. CAT ENSGALG00000030187 7534 0.94 - - - - - - - 0.940 - - catalase [Source:NCBI gene;Acc:423600]
70. CNOT6 ENSGALG00000034316 10496 0.938 - - - - - - - 0.938 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
71. AES ENSGALG00000029503 17676 0.93 - - - - - - - 0.930 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
72. CNDP2 ENSGALG00000019514 19531 0.924 - - - - - - - 0.924 - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
73. NAT10 ENSGALG00000014573 12754 0.923 - - - - - - - 0.923 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
74. GSTO1 ENSGALG00000008409 7561 0.922 - - - - - - - 0.922 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
75. PNPT1 ENSGALG00000043545 1306 0.905 - - - - - - - - - 0.905 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
76. MRPL38 ENSGALG00000002194 6648 0.902 - - - - - - - 0.902 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
77. N6AMT2 N6AMT2 4703 0.901 - - - - - - - 0.901 - -
78. PCNP ENSGALG00000015330 15750 0.901 - - - - - - - - - 0.901 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
79. DGKZ ENSGALG00000008380 5389 0.901 - - - - - - - 0.901 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
80. DPYSL2 ENSGALG00000000227 9668 0.898 - - - - - - - 0.898 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
81. PPP1CC ENSGALG00000004571 14748 0.898 - - - - - - - 0.898 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
82. TMEM128 ENSGALG00000014992 6567 0.894 - - - - - - - - - 0.894 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
83. KIF2C ENSGALG00000010120 8999 0.891 - - - - - - - 0.891 - - kinesin family member 2C, transcript variant X1
84. PAX1 ENSGALG00000039040 3339 0.889 - - - - - - - 0.889 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
85. AFG3L2 ENSGALG00000013853 1138 0.888 - - - - - - - - - 0.888 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
86. NARS ENSGALG00000040506 9506 0.886 - - - - - - - - - 0.886 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
87. PPP4R2 ENSGALG00000007810 15127 0.886 - - - - - - - - - 0.886 protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
88. LOC426385 ENSGALG00000026301 2703 0.884 - - - - - - - - - 0.884 serine/threonine kinase 35-like, transcript variant X2
89. QDPR ENSGALG00000030070 6953 0.883 - - - - - - - - - 0.883 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
90. PAK1IP1 ENSGALG00000012724 10907 0.88 - - - - - - - - - 0.880 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
91. CLSPN ENSGALG00000002346 2590 0.879 - - - - - - - - - 0.879 claspin [Source:NCBI gene;Acc:428223]
92. MTERFD1 MTERFD1 3640 0.879 - - - - - - - - - 0.879
93. CCDC51 ENSGALG00000006465 1845 0.879 - - - - - - - - - 0.879 coiled-coil domain containing 51, transcript variant X1
94. COG6 ENSGALG00000017035 2777 0.879 - - - - - - - - - 0.879 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
95. RBM5 30998 0.879 - - - - - - - - - 0.879 RNA binding motif protein 5, transcript variant X1
96. TXNDC11 ENSGALG00000003154 2224 0.878 - - - - - - - - - 0.878 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
97. TMEM68 ENSGALG00000031835 1691 0.878 - - - - - - - - - 0.878 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
98. RNF219 ENSGALG00000016911 4458 0.877 - - - - - - - - - 0.877 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
99. CPSF2 ENSGALG00000010783 5236 0.877 - - - - - - - - - 0.877 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
100. HOTAIRM1 HOTAIRM1 4335 0.876 - - - - - - - - - 0.876

There are 420 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA