Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPE

Gene Name Gene ID Reads Annotation
COPE ENSGALG00000003153 19444 coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]











Genes with expression patterns similar to COPE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPE ENSGALG00000003153 19444 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
2. UTP3 ENSGALG00000011553 8814 2.501 - - - - 0.903 - 0.874 0.724 - - UTP3, small subunit processome component homolog (S. cerevisiae)
3. H2AFY_1 ENSGALG00000040141 4895 1.857 - - - - 0.936 - 0.921 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
4. ADH5 ENSGALG00000012245 38217 1.823 - - - - 0.899 - 0.924 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
5. ALDH4A1 ENSGALG00000042184 9432 1.78 - - - - 0.911 - 0.869 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
6. CCDC58 ENSGALG00000014413 9022 1.77 - - - - 0.918 - 0.852 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
7. CRCP ENSGALG00000002587 8809 1.757 - - 0.825 - 0.932 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
8. MSH2 ENSGALG00000008962 9709 1.725 - - - - 0.919 - - 0.806 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
9. PRPS1 ENSGALG00000004908 27994 1.697 - - - - 0.894 - 0.803 - - - phosphoribosyl pyrophosphate synthetase 1
10. PWP1 ENSGALG00000012631 10536 1.683 - - - - 0.926 - - 0.757 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
11. CTSL2 CTSL2 7966 1.679 - - - - 0.938 - - 0.741 - -
12. ATP5J 14451 1.674 - - - - 0.925 - - 0.749 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
13. OGFOD1 6926 1.669 - - - - - - 0.930 0.739 - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
14. SLC9A3R2 ENSGALG00000005608 4220 1.668 - - 0.721 - 0.947 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
15. XRN1 ENSGALG00000002706 4014 1.664 - - - - - - 0.915 0.749 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
16. MCM4 ENSGALG00000012915 13151 1.654 - - - - - - 0.800 0.854 - - minichromosome maintenance complex component 4
17. FAM96B 14435 1.651 - - - - - - 0.825 0.826 - - family with sequence similarity 96 member B
18. POLR3E ENSGALG00000007008 4010 1.644 - - - - - - 0.925 0.719 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
19. ENSGALG00000007509 ENSGALG00000007509 18441 1.643 - - - - 0.795 - 0.848 - - -
20. TMEM203 ENSGALG00000008925 3033 1.638 - - - - 0.935 - - 0.703 - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
21. PHB ENSGALG00000038604 21632 1.623 - - - - 0.919 - 0.704 - - - prohibitin [Source:NCBI gene;Acc:419980]
22. MGST1 ENSGALG00000013098 17632 1.605 - - - - 0.735 - 0.870 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
23. XPA ENSGALG00000028998 8621 1.572 - - - - - - 0.866 0.706 - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
24. PSMB3 ENSGALG00000001597 22588 1.553 - - - - - - 0.834 0.719 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
25. TCF3 ENSGALG00000001093 15624 1.552 - - - - 0.808 - 0.744 - - - transcription factor 3 [Source:NCBI gene;Acc:395146]
26. STX2 ENSGALG00000002536 10438 1.522 - - - - 0.776 - 0.746 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
27. SIPA1L1 ENSGALG00000009381 4019 1.483 - - - - - - - 0.738 - 0.745 signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
28. COX7A2L ENSGALG00000037996 13646 0.963 - - - - - - 0.963 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
29. NDUFA9 ENSGALG00000017282 14358 0.961 - - - - - - 0.961 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
30. TM9SF3 ENSGALG00000005534 15290 0.956 - - - - - - 0.956 - - - transmembrane 9 superfamily member 3
31. BTAF1 ENSGALG00000030598 3556 0.955 - - - - - - 0.955 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
32. HMGN1 ENSGALG00000016067 17375 0.954 - - - - 0.954 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
33. LARP1 ENSGALG00000040109 14808 0.953 - - - - - - 0.953 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
34. NDUFA4 ENSGALG00000025999 53323 0.951 - - - - 0.951 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
35. C1H21ORF33 ENSGALG00000019171 8910 0.949 - - - - 0.949 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
36. C19orf70 ENSGALG00000026847 19315 0.945 - - - - 0.945 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
37. RNF207 2949 0.945 - - - - 0.945 - - - - - ring finger protein 207, transcript variant X1
38. ARPP21 ENSGALG00000043240 2403 0.945 - - - - 0.945 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
39. SLC25A15 ENSGALG00000017032 6773 0.945 - - - - 0.945 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
40. GCLM ENSGALG00000005782 15789 0.945 - - - - - - 0.945 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
41. COQ3 ENSGALG00000015486 3508 0.944 - - - - 0.944 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
42. AP1S3 ENSGALG00000005171 2981 0.942 - - - - 0.942 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
43. ZWILCH ENSGALG00000007736 4939 0.942 - - - - 0.942 - - - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
44. DPCD ENSGALG00000007731 7225 0.942 - - - - 0.942 - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
45. IL4RA IL4RA 1237 0.941 - - - - 0.941 - - - - -
46. POLR1B ENSGALG00000032273 3845 0.94 - - - - 0.940 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
47. ATPAF1 ENSGALG00000010444 3677 0.94 - - - - 0.940 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
48. DHX33 ENSGALG00000001630 7783 0.94 - - - - 0.940 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
49. GLI2 ENSGALG00000011630 3347 0.94 - - - - 0.940 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
50. PRKCD ENSGALG00000002016 1476 0.94 - - - - 0.940 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
51. FZD6 ENSGALG00000030626 3336 0.94 - - - - 0.940 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
52. DAP3 ENSGALG00000019796 13278 0.94 - - - - 0.940 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
53. SMC6 ENSGALG00000016467 3321 0.939 - - - - 0.939 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
54. PDHB ENSGALG00000029576 12254 0.939 - - - - 0.939 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
55. ZNF318 ENSGALG00000034040 1758 0.939 - - - - 0.939 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
56. TCERG1L ENSGALG00000010470 490 0.939 - - - - 0.939 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
57. SEMA4B ENSGALG00000008297 11202 0.939 - - - - - - 0.939 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
58. CALCA CALCA 682 0.939 - - - - 0.939 - - - - -
59. FANCM ENSGALG00000031182 1030 0.938 - - - - 0.938 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
60. KLF3 ENSGALG00000041717 2787 0.938 - - - - 0.938 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
61. BBS2 ENSGALG00000042415 1816 0.938 - - - - 0.938 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
62. MED7 ENSGALG00000003870 4244 0.938 - - - - - - 0.938 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
63. TEL TEL 1231 0.938 - - - - 0.938 - - - - -
64. LYN ENSGALG00000042321 3539 0.938 - - - - 0.938 - - - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
65. CGT CGT 948 0.937 - - - - 0.937 - - - - -
66. TMEM184C ENSGALG00000010019 7856 0.937 - - - - 0.937 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
67. SPTBN1 ENSGALG00000029512 18579 0.937 - - - - - - 0.937 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
68. ALDH18A1 ENSGALG00000034655 3038 0.937 - - - - 0.937 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
69. DLGAP5 ENSGALG00000012165 2406 0.937 - - - - 0.937 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
70. REXO5 ENSGALG00000002239 2466 0.937 - - - - 0.937 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
71. LOC770492 ENSGALG00000027778 695 0.937 - - - - 0.937 - - - - - ras-related and estrogen-regulated growth inhibitor-like
72. MYBBP1A ENSGALG00000001363 10331 0.937 - - - - 0.937 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
73. ZBTB8OS ENSGALG00000003517 2436 0.937 - - - - 0.937 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
74. OGFOD3 ENSGALG00000001618 2438 0.937 - - - - 0.937 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
75. RAB23 ENSGALG00000016279 597 0.936 - - - - 0.936 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
76. DNAJA1 ENSGALG00000023066 3820 0.936 - - - - 0.936 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
77. DRD2 ENSGALG00000007794 399 0.936 - - - - 0.936 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
78. ERICH1 ENSGALG00000031021 1495 0.936 - - - - 0.936 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
79. Sep-11 Sep-11 2005 0.936 - - - - 0.936 - - - - -
80. PEX2 ENSGALG00000035752 4427 0.936 - - - - 0.936 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
81. TP53BP2 ENSGALG00000042816 12368 0.935 - - - - - - 0.935 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
82. ROR2 ENSGALG00000015208 1323 0.935 - - - - 0.935 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
83. GALNTL4 GALNTL4 3548 0.935 - - - - 0.935 - - - - -
84. ADPGK ENSGALG00000001788 208 0.935 - - - - 0.935 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
85. UBA3 ENSGALG00000013410 6923 0.935 - - - - - - 0.935 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
86. ITPA ENSGALG00000003250 7722 0.935 - - - - 0.935 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
87. NQO2 ENSGALG00000025747 2287 0.935 - - - - 0.935 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
88. PLS3 ENSGALG00000005930 12625 0.935 - - - - 0.935 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
89. TMX4 ENSGALG00000028587 3513 0.935 - - - - 0.935 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
90. WWP2 ENSGALG00000000699 5040 0.934 - - - - 0.934 - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
91. HDGFL3 ENSGALG00000006036 13576 0.934 - - - - - - 0.934 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
92. CHD4 ENSGALG00000013565 25695 0.934 - - - - 0.934 - - - - - chromodomain helicase DNA binding protein 4
93. IFT172 ENSGALG00000016509 1226 0.934 - - - - 0.934 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
94. POR ENSGALG00000002053 5223 0.934 - - - - - - 0.934 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
95. MICALL1 ENSGALG00000012265 3753 0.934 - - - - 0.934 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
96. RPAP3 ENSGALG00000009743 3380 0.933 - - - - 0.933 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
97. GTF2H3 ENSGALG00000023682 9914 0.933 - - - - 0.933 - - - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
98. METTL25 1538 0.933 - - - - 0.933 - - - - - methyltransferase like 25, transcript variant X1
99. SDF4 ENSGALG00000001872 6382 0.933 - - - - - - 0.933 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
100. TRAM1 ENSGALG00000041112 22876 0.932 - - - - - - 0.932 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]

There are 418 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA