Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPB2

Gene Name Gene ID Reads Annotation
COPB2 ENSGALG00000005357 15208 coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]











Genes with expression patterns similar to COPB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPB2 ENSGALG00000005357 15208 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
2. gga-mir-1778 ENSGALG00000025181 8765 1.872 - - - - 0.946 - - 0.926 - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
3. DARS ENSGALG00000012355 2887 1.816 - - - - 0.954 - - 0.862 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
4. CKAP5 ENSGALG00000008325 8494 1.731 - - - - 0.923 - 0.808 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
5. TMED2 ENSGALG00000003307 20704 1.715 - - - - 0.925 - 0.790 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
6. SMS ENSGALG00000016379 11607 1.714 - - - - 0.963 - 0.751 - - - spermine synthase [Source:NCBI gene;Acc:418602]
7. SDHD ENSGALG00000007878 25129 1.71 - - - - - - 0.762 0.948 - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
8. COPA ENSGALG00000009153 11618 1.706 - - - - 0.953 - 0.753 - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
9. LSM6 ENSGALG00000009985 18582 1.706 - - - - 0.919 - 0.787 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
10. SRI ENSGALG00000008985 13865 1.7 - - - - - - 0.715 0.985 - - sorcin [Source:NCBI gene;Acc:420538]
11. HNRNPLL ENSGALG00000008504 14719 1.679 - - - - 0.943 - 0.736 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
12. TMEM167A ENSGALG00000027332 13862 1.676 - - - - 0.963 - 0.713 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
13. DRG1 ENSGALG00000006921 10791 1.673 - - - - 0.940 - 0.733 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
14. DIABLO ENSGALG00000004412 9499 1.671 - - 0.717 - 0.954 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
15. GOLGA7 ENSGALG00000003483 26525 1.665 - - - - 0.888 - 0.777 - - - golgin A7 [Source:NCBI gene;Acc:426787]
16. PSMD12 ENSGALG00000026225 17473 1.656 - - - - 0.881 - 0.775 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
17. NABP1 ENSGALG00000025884 4195 1.644 - - - - - - 0.775 0.869 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
18. BUB1 ENSGALG00000008233 11536 1.639 - - - - 0.853 - 0.786 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
19. GALNT1 ENSGALG00000013135 13583 1.632 - - - - - - 0.775 0.857 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
20. KDM5B ENSGALG00000038948 50645 1.631 - - - - 0.810 - 0.821 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
21. MRPL20 ENSGALG00000001542 28764 1.63 - - - - 0.906 - 0.724 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
22. RANBP1 ENSGALG00000002107 17715 1.627 - - - - 0.862 - 0.765 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
23. NDUFAF2 ENSGALG00000027564 7302 1.62 - - - - - - 0.758 0.862 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
24. ZNF593 ENSGALG00000000542 79105 1.609 - - - - 0.873 - 0.736 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
25. CIAPIN1 ENSGALG00000029268 23036 1.599 - - - - - - 0.796 0.803 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
26. BRP44 BRP44 17093 1.592 - - - - 0.864 - 0.728 - - -
27. RPS8 ENSGALG00000010124 363516 1.589 - - - - 0.867 - - 0.722 - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
28. PDZD11 ENSGALG00000004198 11484 1.589 - - - - - - 0.717 0.872 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
29. HCFC2 ENSGALG00000029616 4525 1.583 - - - - - - 0.715 0.868 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
30. CUTC ENSGALG00000037283 2530 1.558 - - - - - - 0.701 0.857 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
31. EGLN1 ENSGALG00000041422 11032 1.549 - - - - - - 0.778 0.771 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
32. GPS1 ENSGALG00000002827 8433 1.543 - - - - - - 0.713 0.830 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
33. PTCD3 ENSGALG00000015773 3059 1.512 - - - - - - 0.757 0.755 - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
34. PSMB7 ENSGALG00000001103 42683 1.505 - - - - 0.768 - 0.737 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
35. AKAP12 ENSGALG00000036240 64617 1.499 - - - - 0.705 - - 0.794 - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
36. WTAP ENSGALG00000011660 10811 1.473 - - - - - - 0.759 0.714 - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
37. UBR5 ENSGALG00000031282 12143 1.457 - - - - - - 0.751 0.706 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
38. FAM160B1 ENSGALG00000031404 3153 1.431 - - - - - - 0.715 - 0.716 - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
39. ALG2 ENSGALG00000013573 5229 0.976 - - - - - - - 0.976 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
40. WSB2 ENSGALG00000008151 13246 0.966 - - - - 0.966 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
41. SOD2 ENSGALG00000011661 13178 0.965 - - - - 0.965 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
42. SRP68 ENSGALG00000002062 7370 0.963 - - - - 0.963 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
43. RHBDF1 ENSGALG00000007434 2359 0.963 - - - - 0.963 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
44. CNOT2 ENSGALG00000010042 7612 0.963 - - - - 0.963 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
45. RBM15B 5416 0.962 - - - - 0.962 - - - - - RNA binding motif protein 15B
46. BTBD7 4136 0.961 - - - - 0.961 - - - - - BTB domain containing 7, transcript variant X2
47. ASPM ENSGALG00000032398 12784 0.961 - - - - 0.961 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
48. FOCAD ENSGALG00000015071 3677 0.961 - - - - 0.961 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
49. AEN ENSGALG00000044204 2633 0.961 - - - - 0.961 - - - - - apoptosis enhancing nuclease, transcript variant X1
50. TIMM21 ENSGALG00000013709 3215 0.96 - - - - 0.960 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
51. SUGT1 ENSGALG00000016946 22881 0.96 - - - - 0.960 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
52. PIK3CD ENSGALG00000002583 1036 0.96 - - - - 0.960 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
53. ANXA11 ENSGALG00000043826 5189 0.96 - - - - 0.960 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
54. ZNF326 ENSGALG00000006113 15141 0.96 - - - - 0.960 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
55. GLB1L2 ENSGALG00000001604 4057 0.959 - - - - 0.959 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
56. MANF ENSGALG00000002362 7518 0.959 - - - - 0.959 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
57. UTP15 ENSGALG00000013510 13122 0.959 - - - - 0.959 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
58. MAP1LC3A ENSGALG00000038721 2230 0.959 - - - - 0.959 - - - - - microtubule associated protein 1 light chain 3 alpha
59. PCIF1 ENSGALG00000023547 867 0.959 - - - - 0.959 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
60. ADSL ENSGALG00000012034 10280 0.958 - - - - 0.958 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
61. FBXW7 ENSGALG00000010103 5982 0.958 - - - - 0.958 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
62. NOL12 ENSGALG00000012410 5658 0.958 - - - - 0.958 - - - - - nucleolar protein 12
63. PAXIP1 ENSGALG00000036064 3120 0.958 - - - - 0.958 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
64. COPG2 ENSGALG00000008144 4542 0.958 - - - - 0.958 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
65. GPALPP1 ENSGALG00000031567 4221 0.958 - - - - 0.958 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
66. LSMD1 LSMD1 2562 0.957 - - - - 0.957 - - - - -
67. CRIPT ENSGALG00000010014 4311 0.957 - - - - 0.957 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
68. SH3GLB1 ENSGALG00000006284 12764 0.957 - - - - 0.957 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
69. TDRD3 ENSGALG00000016936 3412 0.957 - - - - 0.957 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
70. C9orf89 C9orf89 3056 0.957 - - - - 0.957 - - - - -
71. CDR2L ENSGALG00000026295 4142 0.957 - - - - 0.957 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
72. MXD4 ENSGALG00000015688 1472 0.956 - - - - 0.956 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
73. WDR36 ENSGALG00000000247 11277 0.956 - - - - 0.956 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
74. KDM1A ENSGALG00000033469 20632 0.956 - - - - 0.956 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
75. NMT1 ENSGALG00000000857 5770 0.956 - - - - 0.956 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
76. FAM18B1 ENSGALG00000001335 5177 0.956 - - - - 0.956 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
77. ENSGALG00000005720 ENSGALG00000005720 1666 0.956 - - - - 0.956 - - - - -
78. TMEM65 ENSGALG00000037371 776 0.956 - - - - 0.956 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
79. ITPK1 ENSGALG00000034898 4212 0.955 - - - - 0.955 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
80. MAP3K13 ENSGALG00000006655 632 0.955 - - - - 0.955 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
81. AIP ENSGALG00000040247 4166 0.955 - - - - 0.955 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
82. KAT6A ENSGALG00000003641 2631 0.954 - - - - 0.954 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
83. DYNC1LI1 ENSGALG00000011491 11011 0.954 - - - - 0.954 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
84. CSNK1E ENSGALG00000032257 2165 0.954 - - - - 0.954 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
85. MTG1 ENSGALG00000003549 5032 0.954 - - - - 0.954 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
86. HABP4 ENSGALG00000012628 2894 0.953 - - - - 0.953 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
87. MAP2K4 ENSGALG00000032178 5982 0.953 - - - - 0.953 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
88. RSU1 ENSGALG00000040891 12561 0.953 - - - - 0.953 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
89. PDXP ENSGALG00000023131 2663 0.952 - - - - 0.952 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
90. NDUFB4 ENSGALG00000027688 8951 0.951 - - - - 0.951 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
91. CLSPN ENSGALG00000002346 2590 0.951 - - - - 0.951 - - - - - claspin [Source:NCBI gene;Acc:428223]
92. RBM5 30998 0.951 - - - - 0.951 - - - - - RNA binding motif protein 5, transcript variant X1
93. RNF11 ENSGALG00000010539 8617 0.951 - - - - 0.951 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
94. TXNDC9 ENSGALG00000032090 6804 0.95 - - - - 0.950 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
95. TRAM1 ENSGALG00000041112 22876 0.95 - - - - 0.950 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
96. OCIAD1 ENSGALG00000014081 12065 0.948 - - - - 0.948 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
97. MRPL32 ENSGALG00000037258 6861 0.948 - - - - 0.948 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
98. TLK1 ENSGALG00000009569 5446 0.948 - - - - 0.948 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
99. EIF3J ENSGALG00000008187 43570 0.948 - - - - 0.948 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
100. TIA1 ENSGALG00000013879 16330 0.948 - - - - 0.948 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]

There are 454 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA