Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPB1

Gene Name Gene ID Reads Annotation
COPB1 ENSGALG00000006015 16518 coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]











Genes with expression patterns similar to COPB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPB1 ENSGALG00000006015 16518 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
2. IST1 ENSGALG00000000811 10527 1.576 - - - - - - 0.805 0.771 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
3. BYSL ENSGALG00000003467 7555 1.532 - - - - - - 0.729 0.803 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
4. MND1 ENSGALG00000009212 11765 1.433 - - - - - - 0.704 0.729 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
5. ARL5B ENSGALG00000008557 12887 0.933 - - - - - - 0.933 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
6. MRPS33 ENSGALG00000028879 17966 0.93 - - - - - - 0.930 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
7. TOP1 ENSGALG00000003681 30214 0.922 - - - - - - 0.922 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
8. BCAS2 ENSGALG00000002002 22536 0.919 - - - - - - 0.919 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
9. SKA2 ENSGALG00000005090 24296 0.914 - - - - - - 0.914 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
10. ENSGALG00000000508 ENSGALG00000000508 19203 0.91 - - - - - - 0.910 - - -
11. COX7A2 ENSGALG00000015906 62347 0.904 - - - - - - 0.904 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
12. PDCD5 ENSGALG00000004648 22576 0.904 - - - - - - 0.904 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
13. ACP1 ENSGALG00000016363 10636 0.903 - - - - - - 0.903 - - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
14. RSU1 ENSGALG00000040891 12561 0.897 - - - - - - 0.897 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
15. EMC3 ENSGALG00000003738 10363 0.896 - - - - - - 0.896 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
16. EPRS ENSGALG00000009598 26412 0.895 - - - - - - 0.895 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
17. CHD4 ENSGALG00000013565 25695 0.895 - - - - - - 0.895 - - - chromodomain helicase DNA binding protein 4
18. PAIP2 11856 0.893 - - - - - - 0.893 - - - poly(A) binding protein interacting protein 2, transcript variant X1
19. HAT1 ENSGALG00000009525 24864 0.892 - - - - - - 0.892 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
20. MESDC2 MESDC2 11010 0.892 - - - - - - 0.892 - - -
21. ETFDH ENSGALG00000009442 7671 0.89 - - - - - - 0.890 - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
22. PPP4R2 ENSGALG00000007810 15127 0.888 - - - - - - 0.888 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
23. TBCA ENSGALG00000004353 18510 0.887 - - - - - - 0.887 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
24. ENSGALG00000028938 ENSGALG00000028938 18616 0.885 - - - - - - 0.885 - - -
25. TMED5 27507 0.884 - - - - - - 0.884 - - - transmembrane p24 trafficking protein 5
26. TBP ENSGALG00000011171 5759 0.883 - - - - - - 0.883 - - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
27. THOC7 ENSGALG00000007299 38227 0.879 - - - - - - 0.879 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
28. C1H21ORF91 ENSGALG00000028290 5550 0.878 - - - - - - 0.878 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
29. NLK ENSGALG00000005699 9066 0.878 - - - - - - 0.878 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
30. YAF2 ENSGALG00000009540 8452 0.875 - - - - - - 0.875 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
31. NOC3L ENSGALG00000035667 7441 0.874 - - - - - - 0.874 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
32. C26H6ORF125 ENSGALG00000002881 15827 0.873 - - - - - - 0.873 - - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
33. ENSGALG00000007096 ENSGALG00000007096 14595 0.869 - - - - - - 0.869 - - -
34. DESI2 ENSGALG00000010678 4590 0.866 - - - - - - 0.866 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
35. SEC31A ENSGALG00000040484 20190 0.864 - - - - - - 0.864 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
36. FH ENSGALG00000013165 13669 0.862 - - - - - - 0.862 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
37. ACTL6A ENSGALG00000009061 13013 0.861 - - - - - - 0.861 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
38. COMMD3 ENSGALG00000007900 8629 0.86 - - - - - - 0.860 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
39. MRTO4 ENSGALG00000003991 13642 0.86 - - - - - - 0.860 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
40. NDUFB6 ENSGALG00000002033 45494 0.858 - - - - - - 0.858 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
41. RPL22L1 ENSGALG00000009312 59030 0.853 - - - - - - 0.853 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
42. EXOC7 ENSGALG00000002050 9612 0.853 - - - - - - 0.853 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
43. ACAD9 ENSGALG00000005034 22100 0.852 - - - - - - 0.852 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
44. TMEM128 ENSGALG00000014992 6567 0.849 - - - - - - 0.849 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
45. MRPS6 ENSGALG00000027579 8225 0.848 - - - - - - 0.848 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
46. HNRNPH1 HNRNPH1 8819 0.848 - - - - - - - 0.848 - -
47. ITM2A ENSGALG00000004107 29262 0.844 - - - - - - 0.844 - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
48. RBF RBF 49711 0.842 - - - - - - 0.842 - - -
49. FAM168B ENSGALG00000002172 12162 0.842 - - - - - - 0.842 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
50. NUDC ENSGALG00000000895 17844 0.841 - - - - - - 0.841 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
51. TPP2 ENSGALG00000016865 7509 0.838 - - - - - - 0.838 - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
52. ADD3 ENSGALG00000008542 13814 0.838 - - - - - - 0.838 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
53. MRPS10 ENSGALG00000009890 9157 0.838 - - - - - - 0.838 - - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
54. FUBP3 ENSGALG00000003941 12667 0.837 - - - - - - 0.837 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
55. MOXD1 ENSGALG00000002911 8523 0.836 - - - - - - - 0.836 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
56. DPY30 ENSGALG00000010621 6818 0.835 - - - - - - 0.835 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
57. SPTAN1 ENSGALG00000004719 20251 0.834 - - - - - - 0.834 - - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
58. UBE2R2 ENSGALG00000001668 9234 0.834 - - - - - - - 0.834 - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
59. ATP5H 53898 0.833 - - - - - - 0.833 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
60. FNDC3AL ENSGALG00000004169 4980 0.833 - - - - - - 0.833 - - - fibronectin type III domain containing 3A-like, transcript variant X3
61. ZRANB2 ENSGALG00000011340 18994 0.833 - - - - - - 0.833 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
62. PCBP4 ENSGALG00000027695 7937 0.833 - - - - - - 0.833 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
63. TCF7L2 ENSGALG00000008883 13688 0.833 - - - - - - 0.833 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
64. DLC1 ENSGALG00000013715 5297 0.832 - - - - - - 0.832 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
65. MAB21L1 ENSGALG00000045052 1677 0.832 - - - - - - - 0.832 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
66. ABCF2 ENSGALG00000034573 15639 0.832 - - - - - - 0.832 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
67. PAXBP1 ENSGALG00000036833 5573 0.831 - - - - - - 0.831 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
68. CHDZ CHDZ 10381 0.831 - - - - - - 0.831 - - -
69. PAFAH1B1 ENSGALG00000005834 23532 0.827 - - - - - - 0.827 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]
70. ATP6V1D ENSGALG00000009570 9827 0.827 - - - - - - 0.827 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
71. BDH1_1 ENSGALG00000023601 6109 0.826 - - - - - - 0.826 - - - 3-hydroxybutyrate dehydrogenase, type 1
72. DAK DAK 13208 0.823 - - - - - - 0.823 - - -
73. ARHGDIB ENSGALG00000011738 39492 0.823 - - - - - - 0.823 - - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
74. PARP16 ENSGALG00000007365 9467 0.823 - - - - - - 0.823 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
75. MKRN1 ENSGALG00000012852 6907 0.822 - - - - - - 0.822 - - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
76. CWC22 ENSGALG00000009001 5984 0.822 - - - - - - 0.822 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
77. AIMP1 ENSGALG00000010553 17994 0.82 - - - - - - 0.820 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
78. EXOSC3 ENSGALG00000002426 7255 0.819 - - - - - - - 0.819 - - exosome component 3 [Source:NCBI gene;Acc:423626]
79. CRHOB CRHOB 27139 0.819 - - - - - - 0.819 - - -
80. XPO6 ENSGALG00000035360 7042 0.815 - - - - - - 0.815 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
81. ACTR3 ENSGALG00000012159 16020 0.814 - - - - - - 0.814 - - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
82. LAMTOR2 ENSGALG00000029881 35356 0.814 - - - - - - 0.814 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
83. CCDC104 CCDC104 6584 0.813 - - - - - - 0.813 - - -
84. PSMD14 ENSGALG00000011128 13335 0.812 - - - - - - - 0.812 - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
85. PODXL ENSGALG00000006409 30676 0.808 - - - - - - 0.808 - - - podocalyxin like [Source:NCBI gene;Acc:395755]
86. ODC1 ENSGALG00000016444 20119 0.807 - - - - - - 0.807 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
87. STOML2 STOML2 15566 0.806 - - - - - - 0.806 - - -
88. SLC35B1 ENSGALG00000035057 10683 0.806 - - - - - - 0.806 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
89. LOC427439 ENSGALG00000003605 9312 0.805 - - - - - - 0.805 - - - Nipped-B homolog-like, transcript variant X1
90. LGMN ENSGALG00000010811 7401 0.805 - - - - - - 0.805 - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
91. ACTA1 ENSGALG00000011086 2543 0.804 - - - - - - - 0.804 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
92. UTP18 ENSGALG00000002985 7129 0.804 - - - - - - 0.804 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
93. VPRBP VPRBP 4037 0.803 - - - - - - - 0.803 - -
94. RNF19B ENSGALG00000039716 662 0.803 - - - - - - - 0.803 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
95. NCAPG2 ENSGALG00000006525 2319 0.803 - - - - - - - 0.803 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
96. RPAIN ENSGALG00000001666 2676 0.803 - - - - - - - 0.803 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
97. LAMA5 486 0.803 - - - - - - - 0.803 - - laminin subunit alpha 5, transcript variant X3
98. ZNF318 ENSGALG00000034040 1758 0.803 - - - - - - - 0.803 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
99. SETD9 ENSGALG00000014719 5081 0.803 - - - - - - - 0.803 - - SET domain containing 9, transcript variant X2
100. QSOX2 ENSGALG00000001758 638 0.803 - - - - - - - 0.803 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA