Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COPA

Gene Name Gene ID Reads Annotation
COPA ENSGALG00000009153 11618 coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]











Genes with expression patterns similar to COPA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COPA ENSGALG00000009153 11618 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
2. MTG1 ENSGALG00000003549 5032 1.863 - - - 0.888 0.975 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
3. PAXIP1 ENSGALG00000036064 3120 1.858 - - - 0.879 0.979 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
4. MRPL32 ENSGALG00000037258 6861 1.807 - - - 0.839 0.968 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
5. CLSPN ENSGALG00000002346 2590 1.734 - - - 0.761 0.973 - - - - - claspin [Source:NCBI gene;Acc:428223]
6. COPB2 ENSGALG00000005357 15208 1.706 - - - - 0.953 - 0.753 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
7. CDR2L ENSGALG00000026295 4142 1.683 - - - 0.712 0.971 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
8. CACYBP ENSGALG00000004554 7320 1.661 - - - 0.883 - - 0.778 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
9. EIF3J ENSGALG00000008187 43570 1.66 - - - 0.755 0.905 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
10. ZCCHC6 ENSGALG00000012607 3655 1.651 - - - 0.804 - - 0.847 - - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
11. USP5 ENSGALG00000014525 21883 1.624 - - - 0.798 - - - 0.826 - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
12. IPO9 ENSGALG00000000397 9263 1.616 - - - 0.832 - - 0.784 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
13. UGDH ENSGALG00000041993 23474 1.594 - - - 0.731 0.863 - - - - - UDP-glucose 6-dehydrogenase [Source:NCBI gene;Acc:422792]
14. PAM16 9684 1.521 - - - 0.721 - - 0.800 - - - presequence translocase associated motor 16 homolog, transcript variant X2
15. TMEM167A ENSGALG00000027332 13862 0.98 - - - - 0.980 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
16. PCIF1 ENSGALG00000023547 867 0.978 - - - - 0.978 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
17. AEN ENSGALG00000044204 2633 0.978 - - - - 0.978 - - - - - apoptosis enhancing nuclease, transcript variant X1
18. C9orf89 C9orf89 3056 0.976 - - - - 0.976 - - - - -
19. BRCC3 ENSGALG00000005383 4844 0.976 - - - - 0.976 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
20. ENSGALG00000005720 ENSGALG00000005720 1666 0.976 - - - - 0.976 - - - - -
21. TDRD3 ENSGALG00000016936 3412 0.976 - - - - 0.976 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
22. RHBDF1 ENSGALG00000007434 2359 0.975 - - - - 0.975 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
23. TMEM65 ENSGALG00000037371 776 0.975 - - - - 0.975 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
24. AIP ENSGALG00000040247 4166 0.975 - - - - 0.975 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
25. FOCAD ENSGALG00000015071 3677 0.975 - - - - 0.975 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
26. MAP3K13 ENSGALG00000006655 632 0.975 - - - - 0.975 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
27. CSNK1E ENSGALG00000032257 2165 0.974 - - - - 0.974 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
28. MAP1LC3A ENSGALG00000038721 2230 0.974 - - - - 0.974 - - - - - microtubule associated protein 1 light chain 3 alpha
29. HABP4 ENSGALG00000012628 2894 0.974 - - - - 0.974 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
30. NOL12 ENSGALG00000012410 5658 0.974 - - - - 0.974 - - - - - nucleolar protein 12
31. ADSL ENSGALG00000012034 10280 0.974 - - - - 0.974 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
32. RBM15B 5416 0.973 - - - - 0.973 - - - - - RNA binding motif protein 15B
33. SRP68 ENSGALG00000002062 7370 0.973 - - - - 0.973 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
34. PIK3CD ENSGALG00000002583 1036 0.973 - - - - 0.973 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
35. MXD4 ENSGALG00000015688 1472 0.973 - - - - 0.973 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
36. ITPK1 ENSGALG00000034898 4212 0.973 - - - - 0.973 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
37. BTBD7 4136 0.973 - - - - 0.973 - - - - - BTB domain containing 7, transcript variant X2
38. PDXP ENSGALG00000023131 2663 0.972 - - - - 0.972 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
39. WSB2 ENSGALG00000008151 13246 0.972 - - - - 0.972 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
40. GLB1L2 ENSGALG00000001604 4057 0.972 - - - - 0.972 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
41. KAT6A ENSGALG00000003641 2631 0.972 - - - - 0.972 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
42. CRIPT ENSGALG00000010014 4311 0.972 - - - - 0.972 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
43. TIMM21 ENSGALG00000013709 3215 0.972 - - - - 0.972 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
44. SUGT1 ENSGALG00000016946 22881 0.972 - - - - 0.972 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
45. NMT1 ENSGALG00000000857 5770 0.971 - - - - 0.971 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
46. DRG1 ENSGALG00000006921 10791 0.971 - - - - 0.971 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
47. DARS ENSGALG00000012355 2887 0.971 - - - - 0.971 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
48. LSMD1 LSMD1 2562 0.971 - - - - 0.971 - - - - -
49. FAM18B1 ENSGALG00000001335 5177 0.97 - - - - 0.970 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
50. MPPED1 ENSGALG00000014186 5726 0.97 - - - - 0.970 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
51. FBXW7 ENSGALG00000010103 5982 0.97 - - - - 0.970 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
52. ANXA11 ENSGALG00000043826 5189 0.969 - - - - 0.969 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
53. TPP2 ENSGALG00000016865 7509 0.969 - - - - 0.969 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
54. KDM1A ENSGALG00000033469 20632 0.969 - - - - 0.969 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
55. SOD2 ENSGALG00000011661 13178 0.969 - - - - 0.969 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
56. CNOT2 ENSGALG00000010042 7612 0.968 - - - - 0.968 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
57. GPALPP1 ENSGALG00000031567 4221 0.968 - - - - 0.968 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
58. TLK1 ENSGALG00000009569 5446 0.967 - - - - 0.967 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
59. ZNF326 ENSGALG00000006113 15141 0.966 - - - - 0.966 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
60. TIA1 ENSGALG00000013879 16330 0.966 - - - - 0.966 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
61. MANF ENSGALG00000002362 7518 0.965 - - - - 0.965 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
62. COPG2 ENSGALG00000008144 4542 0.965 - - - - 0.965 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
63. VWDE ENSGALG00000042443 160 0.965 - - - 0.965 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
64. CKAP5 ENSGALG00000008325 8494 0.965 - - - - 0.965 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
65. MLH3 ENSGALG00000010304 231 0.963 - - - 0.963 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
66. MOCS2 ENSGALG00000014906 4974 0.963 - - - - 0.963 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
67. FOXK2 ENSGALG00000001577 6346 0.962 - - - - 0.962 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
68. ZBTB17 ENSGALG00000035352 280 0.962 - - - 0.962 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
69. gga-mir-1778 ENSGALG00000025181 8765 0.962 - - - - 0.962 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
70. TXNDC9 ENSGALG00000032090 6804 0.962 - - - - 0.962 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
71. B4GAL-T7 B4GAL-T7 12356 0.961 - - - - 0.961 - - - - -
72. KIF6 ENSGALG00000010057 84 0.96 - - - 0.960 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
73. MAP2K4 ENSGALG00000032178 5982 0.96 - - - - 0.960 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
74. LFNG ENSGALG00000038515 5178 0.96 - - - - 0.960 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
75. ASPM ENSGALG00000032398 12784 0.96 - - - - 0.960 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
76. GFPT2 ENSGALG00000039705 562 0.96 - - - 0.960 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
77. EIF4G3 ENSGALG00000010084 5881 0.96 - - - - 0.960 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
78. DBN1 ENSGALG00000033405 216 0.96 - - - 0.960 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
79. CA3 CA3 200 0.96 - - - 0.960 - - - - - -
80. OCIAD1 ENSGALG00000014081 12065 0.96 - - - - 0.960 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
81. NDUFB4 ENSGALG00000027688 8951 0.96 - - - - 0.960 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
82. LAP3 ENSGALG00000006334 21076 0.958 - - - - 0.958 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
83. WDR36 ENSGALG00000000247 11277 0.958 - - - - 0.958 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
84. CCNYL1 ENSGALG00000008485 11958 0.957 - - - - 0.957 - - - - - cyclin Y like 1
85. ENSGALG00000027412 ENSGALG00000027412 202 0.957 - - - 0.957 - - - - - -
86. CCDC101 CCDC101 9111 0.956 - - - - 0.956 - - - - -
87. FRRS1 ENSGALG00000005418 332 0.956 - - - 0.956 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
88. RSU1 ENSGALG00000040891 12561 0.955 - - - - 0.955 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
89. DECR1 ENSGALG00000036990 6360 0.955 - - - - 0.955 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
90. DIABLO ENSGALG00000004412 9499 0.955 - - - - 0.955 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
91. ADCY9 ENSGALG00000007779 766 0.954 - - - 0.954 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
92. TRIM62 ENSGALG00000028437 5124 0.953 - - - 0.953 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
93. TRAM1 ENSGALG00000041112 22876 0.952 - - - - 0.952 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
94. MTA1 ENSGALG00000002803 11572 0.952 - - - - 0.952 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
95. SH3GLB1 ENSGALG00000006284 12764 0.952 - - - - 0.952 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
96. KIAA1432 KIAA1432 1792 0.952 - - - 0.952 - - - - - -
97. SNORA31 SNORA31 183 0.951 - - - 0.951 - - - - - -
98. UTP15 ENSGALG00000013510 13122 0.951 - - - - 0.951 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
99. RNPC3 ENSGALG00000005162 269 0.951 - - - 0.951 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
100. TBK1 ENSGALG00000009840 1650 0.95 - - - 0.950 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]

There are 441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA