Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL9A3

Gene Name Gene ID Reads Annotation
COL9A3 ENSDARG00000037845 1 collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]










Genes with expression patterns similar to COL9A3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPTBN4 ENSDARG00000092624 6 2 - 1.000 1.000 - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
2. COL9A3 ENSDARG00000037845 1 2 - 1.000 1.000 - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
3. Mar-03 Mar-03 44 1.747 - 1.000 0.747 - - - - - -
4. edn3b ENSDARG00000086669 8 1.723 - 1.000 0.723 - - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
5. slc15a1b ENSDARG00000044528 6 1.62 - 0.848 0.772 - - - - - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
6. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
7. MOB2 MOB2 4 1 - - 1.000 - - - - - -
8. si:dkey-26c10.5 ENSDARG00000088023 9 1 - - 1.000 - - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
9. ft2 ENSDARG00000109567 5 1 - - 1.000 - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
10. pik3r5 ENSDARG00000102762 56 1 - 1.000 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
11. SLC1A7 SLC1A7 3 1 - - 1.000 - - - - - -
12. snoU13 snoU13 2 1 - - 1.000 - - - - - -
13. WASF1 ENSDARG00000060349 1 1 - - 1.000 - - - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
14. ENSDARG00000089816 ENSDARG00000089816 4 1 - - 1.000 - - - - - -
15. prdm11 ENSDARG00000074468 2 1 - - 1.000 - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
16. KLHL29_1 KLHL29_1 158 1 - 1.000 - - - - - - -
17. slc5a12 ENSDARG00000005004 15 1 - 1.000 - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
18. zgc:153151 ENSDARG00000069563 126 1 - - 1.000 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
19. cx32.2 ENSDARG00000076789 23 1 - 1.000 - - - - - - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
20. rxfp1 ENSDARG00000090071 6 1 - - 1.000 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
21. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - 1.000 - - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
22. BX548011.3 ENSDARG00000113526 2 1 - - 1.000 - - - - - -
23. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - 1.000 - - - - - -
24. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
25. ntm ENSDARG00000018065 1 1 - - 1.000 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
26. SEC14L1 ENSDARG00000101792 4 1 - 1.000 - - - - - - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
27. FRMPD1_2 FRMPD1_2 2 1 - - 1.000 - - - - - -
28. 5S_rRNA_6 5S_rRNA_6 11 1 - 1.000 - - - - - - -
29. park2 42 1 - 1.000 - - - - - - - parkin RBR E3 ubiquitin protein ligase
30. hamp2 hamp2 67 1 - 1.000 - - - - - - -
31. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
32. kcnk15 ENSDARG00000077371 1 1 - - 1.000 - - - - - - potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
33. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - 1.000 - - - - - -
34. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - 1.000 - - - - - - -
35. rh50 ENSDARG00000041848 0 1 - - 1.000 - - - - - - Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
36. kcnj1a.6 ENSDARG00000088484 4 1 - - 1.000 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-050420-272]
37. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - 1.000 - - - - - -
38. si:ch1073-188e1.1 ENSDARG00000074085 0 1 - - 1.000 - - - - - - si:ch1073-188e1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-5]
39. zgc:109965 ENSDARG00000012126 11 1 - - 1.000 - - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
40. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - 1.000 - - - - - - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
41. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - 1.000 - - - - - - -
42. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
43. CHST7 ENSDARG00000044341 3 1 - 1.000 - - - - - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
44. crybb2 ENSDARG00000053512 15 1 - - 1.000 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
45. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
46. ZNF70_3 ZNF70_3 0 1 - - 1.000 - - - - - -
47. evx2 ENSDARG00000059255 317 1 - 1.000 - - - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
48. plxnc1 ENSDARG00000015278 501 1 - 1.000 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
49. RCVRN_1 RCVRN_1 46 1 - - 1.000 - - - - - -
50. EFEMP1_1 EFEMP1_1 8 1 - 1.000 - - - - - - -
51. SIPA1L2 ENSDARG00000061640 2 1 - - 1.000 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
52. U6_19 U6_19 1 1 - 1.000 - - - - - - -
53. si:dkey-242e21.4 1 1 - - 1.000 - - - - - - si:dkey-242e21.4
54. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
55. got1 ENSDARG00000039093 1 1 - - 1.000 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
56. si:dkey-199m13.2 si:dkey-199m13.2 31 1 - 1.000 - - - - - - -
57. sema6e ENSDARG00000000189 35 1 - 1.000 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
58. PGBD4_1 PGBD4_1 1 1 - 1.000 - - - - - - -
59. si:dkey-199m13.5 ENSDARG00000098876 4 1 - 1.000 - - - - - - - si:dkey-199m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-174]
60. CABZ01087025.1 ENSDARG00000117232 10 1 - - 1.000 - - - - - -
61. zgc:158446 36 1 - 1.000 - - - - - - - zgc:158446
62. SH2D2A SH2D2A 31 1 - - 1.000 - - - - - -
63. COX5B ENSDARG00000015978 70 1 - 1.000 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
64. BX901889.2 ENSDARG00000078427 0 1 - - 1.000 - - - - - -
65. SNORD15_1 SNORD15_1 1 1 - - 1.000 - - - - - -
66. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
67. TPO 2 1 - 1.000 - - - - - - - thyroid peroxidase
68. si:dkey-42p8.3 1117 1 - 1.000 - - - - - - - si:dkey-42p8.3, transcript variant X1
69. ENKD1 ENSDARG00000043550 44 1 - - 1.000 - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
70. RP1 ENSDARG00000077687 6 1 - - 1.000 - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
71. irf8 ENSDARG00000056407 85 1 - 1.000 - - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
72. si:ch211-223g7.2 ENSDARG00000103265 1 1 - - 1.000 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
73. ccnd3 ENSDARG00000027391 1 1 - - 1.000 - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
74. tlr3 ENSDARG00000016065, ENSDARG00000117078 66 1 - 1.000 - - - - - - - toll-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040219-7]
75. guk1b ENSDARG00000005776 23 1 - - 1.000 - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
76. RNF122 RNF122 29 1 - 1.000 - - - - - - -
77. ccr12.3 ccr12.3 79 1 - 1.000 - - - - - - -
78. WASF3 WASF3 1 1 - - 1.000 - - - - - -
79. dock3 ENSDARG00000063180 2 1 - - 1.000 - - - - - - dedicator of cytokinesis 3 [Source:ZFIN;Acc:ZDB-GENE-100624-1]
80. CABZ01053592.1 ENSDARG00000117388 6 1 - 1.000 - - - - - - -
81. CABZ01055343.4 CABZ01055343.4 9 1 - - 1.000 - - - - - -
82. gnat2 ENSDARG00000042529 112 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
83. FGD5_1 FGD5_1 8 1 - 1.000 - - - - - - -
84. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
85. dpyda dpyda 12 1 - 1.000 - - - - - - -
86. si:dkey-188i13.10 ENSDARG00000075151 22 1 - 1.000 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
87. ENSDARG00000088134 ENSDARG00000088134 16 1 - 1.000 - - - - - - -
88. CABZ01117474.1 CABZ01117474.1 2 1 - - 1.000 - - - - - -
89. si:dkey-151m22.8 ENSDARG00000095934 41 1 - - 1.000 - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
90. slc6a14 ENSDARG00000029866 61 1 - - 1.000 - - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
91. FAM149A ENSDARG00000073709 7 1 - 1.000 - - - - - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
92. plp1b ENSDARG00000011929 8 1 - - 1.000 - - - - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
93. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - 1.000 - - - - - -
94. stxbp4 ENSDARG00000076997 20 1 - 1.000 - - - - - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
95. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1 - - 1.000 - - - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
96. olfcg4 ENSDARG00000099773 1 1 - - 1.000 - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
97. FBXL6 ENSDARG00000077227 28 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 6 [Source:ZFIN;Acc:ZDB-GENE-060810-162]
98. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - 1.000 - - - - - -
99. CR450780.4 CR450780.4 0 1 - - 1.000 - - - - - -
100. si:dkey-5n18.1 ENSDARG00000043436 220 1 - 1.000 - - - - - - - si:dkey-5n18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-144]

There are 430 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA