Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL9A2

Gene Name Gene ID Reads Annotation
COL9A2 ENSGALG00000027526 4685 collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]











Genes with expression patterns similar to COL9A2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL9A2 ENSGALG00000027526 4685 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
2. C9H2ORF82 ENSGALG00000040264 4201 6.819 - 0.857 0.926 0.824 0.870 0.815 0.783 0.937 0.807 - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
3. COL9A3 ENSGALG00000005628 2842 6.759 - 0.811 0.928 0.885 0.853 0.746 0.840 0.896 0.800 - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
4. SCARA3 ENSGALG00000026651 2559 6.641 - 0.844 0.923 0.755 0.776 0.904 0.760 0.916 0.763 - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
5. SST ENSGALG00000007361 1383 6.033 - - 0.894 0.822 0.836 0.942 0.884 0.870 0.785 - somatostatin [Source:NCBI gene;Acc:396279]
6. COL9A1 ENSGALG00000015970 3788 5.761 - - 0.921 0.830 0.850 0.914 0.771 0.710 0.765 - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
7. COL8A1 ENSGALG00000015253 2505 5.285 - - 0.925 0.827 0.859 0.957 0.829 0.888 - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
8. LECT1 LECT1 12694 5.176 - - 0.889 0.822 0.888 - 0.825 0.922 0.830 -
9. RAB38 ENSGALG00000028018 1046 5.171 - - 0.862 0.849 0.837 0.954 0.719 0.950 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
10. TAC1 ENSGALG00000009737 2211 5.069 - 0.732 0.901 0.861 - 0.870 0.768 0.937 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
11. EMILIN3 ENSGALG00000030012 6200 5.052 - - 0.902 0.842 0.889 0.888 0.823 - 0.708 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
12. T ENSGALG00000011489 2619 5.006 - - 0.877 0.870 0.828 0.895 0.836 - 0.700 - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
13. TIMP3 ENSGALG00000028627 8706 4.94 - - 0.860 0.831 0.752 0.823 0.747 0.927 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
14. WWP2 ENSGALG00000000699 5040 4.937 - 0.792 0.900 - - 0.776 0.846 0.809 0.814 - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
15. SPON2 ENSGALG00000038433 1240 4.26 - 0.764 - - - 0.944 0.900 0.850 0.802 - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
16. OSF-2 OSF-2 10433 4.009 - - 0.786 0.706 - 0.753 0.862 0.902 - -
17. SOX9 ENSGALG00000004386 14802 3.949 - - 0.881 0.745 0.863 - 0.705 - 0.755 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
18. SAMD3 ENSGALG00000032409 459 3.517 - - - 0.827 0.800 0.954 - 0.936 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
19. SHH ENSGALG00000006379 1943 3.401 - - 0.929 0.727 - - 0.857 - 0.888 - sonic hedgehog [Source:NCBI gene;Acc:395615]
20. OCA2 ENSGALG00000016740 421 3.395 - - - 0.858 0.728 0.939 - 0.870 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
21. ZNF385B ENSGALG00000009012 290 3.364 - - 0.891 - 0.725 0.933 - 0.815 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
22. ACAN ENSGALG00000006725 184 3.209 - - 0.763 - - 0.811 - 0.883 0.752 - aggrecan [Source:NCBI gene;Acc:395798]
23. SLC15A5 ENSGALG00000013097 213 3.157 - - 0.744 - 0.705 0.982 0.726 - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
24. SCIN ENSGALG00000010770 883 2.997 - - 0.821 0.754 - 0.716 0.706 - - - scinderin [Source:NCBI gene;Acc:420588]
25. BAFF BAFF 40 2.365 - - 0.776 - 0.704 0.885 - - - -
26. CYP1B1 ENSGALG00000025822 3143 2.362 - 0.743 0.879 - - - - - 0.740 - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
27. SPON1 ENSGALG00000038775 16503 2.199 - - 0.766 - 0.708 - - - 0.725 - spondin 1 [Source:NCBI gene;Acc:395657]
28. PCDH17 ENSGALG00000016941 1006 1.761 - - - - - 0.877 - 0.884 - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
29. NPY7R ENSGALG00000021303 215 1.725 - - - 0.815 - 0.910 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
30. PAX1 ENSGALG00000039040 3339 1.712 - - 0.896 - 0.816 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
31. WIF1 ENSGALG00000039209 863 1.694 - - - - - 0.941 - 0.753 - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
32. SCARA5 ENSGALG00000016580 712 1.679 - - - - - 0.962 0.717 - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
33. CCK ENSGALG00000029788 213 1.673 - - - - - 0.953 - 0.720 - - cholecystokinin [Source:NCBI gene;Acc:414884]
34. RRAD ENSGALG00000005140 183 1.645 - - - - - 0.925 0.720 - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
35. TMEM163 ENSGALG00000012190 72 1.636 - - 0.751 - - 0.885 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
36. MYL1 ENSGALG00000002907 1300 1.609 - - 0.713 - - 0.896 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
37. POMC ENSGALG00000016600 99 1.607 - - - - 0.724 - - 0.883 - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
38. C1QTNF3 ENSGALG00000027887 8646 1.6 - - 0.777 - 0.823 - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
39. SLC24A4 ENSGALG00000010793 238 1.597 - - - - - 0.764 - 0.833 - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
40. EPB41L3 ENSGALG00000038678 5863 1.585 - - 0.849 0.736 - - - - - - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]
41. B3GNT7 ENSGALG00000007701 929 1.568 - - - - - 0.864 0.704 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
42. ENSGALG00000010113 ENSGALG00000010113 508 1.548 - - 0.812 - - - 0.736 - - -
43. SCARF2 ENSGALG00000034560 6945 1.521 - - - - - - 0.766 - 0.755 - scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
44. TF ENSGALG00000006453 14007 1.516 - - 0.796 - - 0.720 - - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
45. SS2 ENSGALG00000003034 277 1.513 - - 0.719 - - 0.794 - - - - somatostatin II [Source:NCBI gene;Acc:395106]
46. TSPAN7 ENSGALG00000016251 6674 1.49 - 0.751 0.739 - - - - - - - tetraspanin 7, transcript variant X2
47. EN1 ENSGALG00000042389 3051 1.487 - - 0.784 - 0.703 - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
48. PTH3R PTH3R 214 0.981 - - - - - 0.981 - - - -
49. LEFTY2 ENSGALG00000009256 1 0.981 - - - - - 0.981 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
50. ENSGALG00000008822 ENSGALG00000008822 221 0.973 - - - - - 0.973 - - - -
51. RASGRF2 ENSGALG00000015598 30 0.951 - - - - - - - 0.951 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
52. HOXA10 ENSGALG00000026631 1 0.951 - - - - - 0.951 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
53. KCNG1 ENSGALG00000007980 26 0.951 - - - - - 0.951 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
54. APOD ENSGALG00000006995 2 0.951 - - - - - 0.951 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
55. PIGM ENSGALG00000010768 41 0.951 - - - - - - - 0.951 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
56. NCBP2 ENSGALG00000006843 938 0.939 - - - - - - - 0.939 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
57. FNDC1 ENSGALG00000011663 1040 0.926 - - - - - - - 0.926 - - fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
58. GEMIN8 ENSGALG00000016574 18 0.914 - - - - - - - 0.914 - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
59. LOC428824 ENSGALG00000004393 358 0.901 - - - - - 0.901 - - - - SITS-binding protein-like, transcript variant X1
60. CHRDL1 ENSGALG00000008072 711 0.886 - - - - - 0.886 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
61. PPP1R1B ENSGALG00000044406 6 0.885 - - - - - 0.885 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
62. F-KER ENSGALG00000028706 0 0.885 - - - - - 0.885 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
63. PPP1R12B ENSGALG00000000336 16 0.885 - - - - - 0.885 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
64. ARHGEF17 6 0.885 - - - - - 0.885 - - - - Rho guanine nucleotide exchange factor 17
65. CARF ENSGALG00000008474 6 0.885 - - - - - 0.885 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
66. SP-A SP-A 9 0.885 - - - - - 0.885 - - - -
67. ENSGALG00000021682 ENSGALG00000021682 0 0.885 - - - - - 0.885 - - - -
68. PSTPIP1 ENSGALG00000002786 9 0.885 - - - - - 0.885 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
69. STX3 ENSGALG00000035153 1 0.885 - - - - - 0.885 - - - - syntaxin 3
70. VSTM2A ENSGALG00000041764 2 0.885 - - - - - 0.885 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
71. PLD5 ENSGALG00000010737 5 0.885 - - - - - 0.885 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
72. ZNRF2 ENSGALG00000031163 0 0.885 - - - - - 0.885 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
73. SEC16A ENSGALG00000002364 19 0.885 - - - - - 0.885 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
74. RHBDF2 ENSGALG00000001943 1 0.885 - - - - - 0.885 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
75. PTPN3 ENSGALG00000022909 6 0.885 - - - - - 0.885 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
76. PRKG2 ENSGALG00000010909 1 0.885 - - - - - 0.885 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
77. MFSD6 ENSGALG00000041884 1 0.885 - - - - - 0.885 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
78. ENSGALG00000013079 ENSGALG00000013079 12 0.885 - - - - - 0.885 - - - -
79. C1H7ORF60 C1H7ORF60 3 0.885 - - - - - 0.885 - - - -
80. FAM160A2 ENSGALG00000003416 23 0.885 - - - - - 0.885 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
81. PITPNC1L ENSGALG00000002610 3 0.885 - - - - - 0.885 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
82. SNX8 ENSGALG00000004255 4 0.885 - - - - - 0.885 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
83. AFTPH ENSGALG00000008828 21 0.885 - - - - - 0.885 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
84. GBE ENSGALG00000011859, ENSGALG00000028016 2 0.885 - - - - - 0.885 - - - - eye-globin, transcript variant X3
85. PABPN1L ENSGALG00000006242 3 0.885 - - - - - 0.885 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
86. C17orf105 C17orf105 11 0.885 - - - - - 0.885 - - - -
87. GAMT ENSGALG00000040182 5 0.885 - - - - - 0.885 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
88. FKHR FKHR 1 0.885 - - - - - 0.885 - - - -
89. SOD3 ENSGALG00000018557 16 0.885 - - - - - 0.885 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
90. gga-mir-10a ENSGALG00000021952 4 0.885 - - - - - 0.885 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
91. AATK ENSGALG00000006901 1 0.885 - - - - - 0.885 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
92. ERI3 ENSGALG00000010106 995 0.885 - - - - - 0.885 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
93. TRIM25 ENSGALG00000003144 12 0.885 - - - - - 0.885 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
94. TBX15 0 0.885 - - - - - 0.885 - - - - T-box 15
95. SLC26A6 ENSGALG00000026089 3 0.885 - - - - - 0.885 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
96. MFSD11 ENSGALG00000001777 8 0.885 - - - - - 0.885 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
97. AK4 ENSGALG00000011035 9 0.885 - - - - - 0.885 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
98. MNOC MNOC 1 0.885 - - - - - 0.885 - - - -
99. STRA8 ENSGALG00000011722 4 0.885 - - - - - 0.885 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
100. TMEM189 ENSGALG00000026906 14 0.885 - - - - - 0.885 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA