Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL9A1

Gene Name Gene ID Reads Annotation
COL9A1 COL9A1 264










Genes with expression patterns similar to COL9A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL9A1 COL9A1 264 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CR382327.1 ENSDARG00000088739 56 4.097 - - 0.705 0.751 0.892 - - 0.873 0.876
3. otomp ENSDARG00000040306 682 3.281 - - 0.790 0.748 0.911 - - - 0.832 otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
4. tbx1 ENSDARG00000031891 397 3.279 - - 0.790 0.933 0.829 - - 0.727 - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
5. mab21l2 ENSDARG00000015266 1687 3.2 - - 0.791 - 0.794 - - 0.816 0.799 mab-21-like 2 [Source:ZFIN;Acc:ZDB-GENE-011101-3]
6. sostdc1a ENSDARG00000068892 127 3.18 - - 0.760 - 0.817 - - 0.806 0.797 sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
7. CLDN22 CLDN22 114 3.083 - - 0.754 0.751 - - - 0.878 0.700
8. fgf20b ENSDARG00000086070 13 2.958 - - - 0.735 0.761 - - 0.722 0.740 fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
9. FOXL2 239 2.493 - - 0.800 - - - - 0.810 0.883 forkhead box L2, transcript variant X1
10. si:dkey-222f2.1 ENSDARG00000043242 192 2.454 - - 0.713 - 0.909 - - 0.832 - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
11. stm ENSDARG00000035694 1567 2.383 - - - 0.730 - - - 0.748 0.905 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
12. si:ch211-80h18.1 ENSDARG00000078522 1941 2.373 - - 0.819 0.756 - - - - 0.798 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
13. foxi1 ENSDARG00000104566 176 2.35 - - - 0.826 0.709 - - - 0.815 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
14. bcan ENSDARG00000099412 18 2.342 - - 0.703 - - - - 0.828 0.811 brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
15. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 2.341 - - - - 0.822 - - 0.764 0.755 solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
16. ENSDARG00000029117 ENSDARG00000029117 80 2.239 - - 0.707 - 0.743 - - - 0.789
17. cyp26b1 ENSDARG00000077121 1364 1.808 - - - - - - - 0.862 0.946 cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
18. tlx1 ENSDARG00000003965 67 1.692 - - - - - - - 0.810 0.882 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
19. efna2 efna2 428 1.671 - - 0.758 - 0.913 - - - -
20. epha4l ENSDARG00000010767 1184 1.668 - - - - - - - 0.790 0.878 eph receptor A4, like [Source:ZFIN;Acc:ZDB-GENE-990415-61]
21. tnnt2a ENSDARG00000020610 313 1.666 - - - - - - - 0.896 0.770 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
22. cldna ENSDARG00000069888 712 1.664 - - - 0.765 - - - - 0.899 claudin a [Source:ZFIN;Acc:ZDB-GENE-010328-1]
23. CMKLR1 ENSDARG00000090890 36 1.663 - - 0.831 - 0.832 - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
24. CR352265.1 ENSDARG00000062758 39 1.66 - - - - - - - 0.747 0.913
25. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 1.65 - - - - 0.793 - - 0.857 - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
26. pax5 ENSDARG00000037383 319 1.648 - - 0.841 - 0.807 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
27. fgfbp2 fgfbp2 14 1.648 - - - - 0.820 - - 0.828 -
28. myl7 ENSDARG00000019096 1023 1.634 - - - - - - - 0.869 0.765 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
29. irx1a ENSDARG00000101831 644 1.623 - - 0.716 - 0.907 - - - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
30. nppa ENSDARG00000052960 295 1.618 - - - - - - - 0.820 0.798 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
31. cyp26c1 ENSDARG00000056029 1426 1.617 - - - 0.821 0.796 - - - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
32. OTOG ENSDARG00000068460 60 1.61 - - - - 0.789 - - 0.821 - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
33. s100s ENSDARG00000036773 90 1.61 - - - - - - - 0.862 0.748 S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
34. foxc1b ENSDARG00000055398 1499 1.603 - - - - - - - 0.768 0.835 forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
35. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1.597 - - 0.882 - - - - 0.715 - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
36. irx7 ENSDARG00000002601 72 1.594 - - - - 0.860 - - 0.734 - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
37. phox2bb_1 ENSDARG00000091029 212 1.589 - - 0.792 - 0.797 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
38. pou4f3 ENSDARG00000006206 8 1.589 - - - - 0.779 - - - 0.810 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
39. dkk2 ENSDARG00000076420 553 1.587 - - 0.778 - - 0.809 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
40. dnajc5b ENSDARG00000058147 6 1.575 - - - - - - - 0.823 0.752 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
41. tnni1b ENSDARG00000052708 478 1.562 - - - - - - - 0.828 0.734 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
42. vmhc 234 1.559 - - - - - - - 0.792 0.767 ventricular myosin heavy chain
43. cmlc1 ENSDARG00000032976 455 1.557 - - - - - - - 0.838 0.719 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
44. FGFBP1 FGFBP1 7 1.55 - - - 0.707 0.843 - - - -
45. tm6sf2 ENSDARG00000029057 43 1.544 - - 0.784 - 0.760 - - - - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
46. CABZ01084700.1 CABZ01084700.1 26 1.543 - - - - 0.749 - - 0.794 -
47. C12H10orf107 C12H10orf107 8 1.536 - - - - 0.766 0.770 - - -
48. fgf20a ENSDARG00000007356, ENSDARG00000114219 25 1.536 - - - - - - - 0.736 0.800 fibroblast growth factor 20a [Source:ZFIN;Acc:ZDB-GENE-060110-1]
49. CABZ01064671.1 ENSDARG00000039935 21 1.536 - - - - - - - 0.794 0.742
50. nkx2.7 ENSDARG00000021232 38 1.533 - - 0.723 - - - - 0.810 - NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
51. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 1.53 - - - - - - - 0.717 0.813 forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
52. STRC ENSDARG00000105391 10 1.521 - - - - - - - 0.774 0.747 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
53. foxf2a ENSDARG00000017195 345 1.516 - - - - - - - 0.809 0.707 forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
54. egr2a ENSDARG00000044098 1101 1.516 - - - - - - - 0.799 0.717 early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
55. dmbx1a ENSDARG00000009922 284 1.515 - - 0.721 - 0.794 - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
56. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.484 - - - - 0.738 - - - 0.746 scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
57. hoxb2a ENSDARG00000000175 1122 1.484 - - - - - - - 0.720 0.764 homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
58. barx1 ENSDARG00000007407 344 1.482 - - - - - - - 0.759 0.723 BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
59. OTOS ENSDARG00000108475 180 1.477 - - 0.734 - - - - 0.743 - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
60. ponzr5 ENSDARG00000055046, ENSDARG00000115684 1093 1.472 - - - - - - - 0.750 0.722 plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]
61. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.471 - - 0.764 0.707 - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
62. cldnj ENSDARG00000058880 59 1.47 - - - 0.708 - - - - 0.762 claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
63. aldh1a3 ENSDARG00000076933 95 1.459 - - - 0.713 - - - - 0.746 aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
64. bcl11ba ENSDARG00000062510 169 1.455 - - - 0.705 - - 0.750 - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
65. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.453 - - - 0.706 - - - 0.747 - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
66. acta2 ENSDARG00000045180 96 1.434 - - - - - - - 0.723 0.711 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
67. FOLR1 FOLR1 25 0.953 - - - - - 0.953 - - -
68. eng2b eng2b 865 0.919 - - 0.919 - - - - - -
69. cyb561 ENSDARG00000038176 55 0.916 - - - - 0.916 - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
70. dnah1 ENSDARG00000100115 17 0.914 - - - - - 0.914 - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
71. tnnc1a ENSDARG00000011400 165 0.904 - - - - - - - 0.904 - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
72. MYL4 ENSDARG00000011519 309 0.9 - - - - - 0.900 - - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
73. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.896 - - - - - - - - 0.896 forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
74. ankrd37 ENSDARG00000056376 131 0.896 - - 0.896 - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
75. rom1a ENSDARG00000019752 11 0.896 - - - - - 0.896 - - - retinal outer segment membrane protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1765]
76. pkz ENSDARG00000052396 2 0.896 - - 0.896 - - - - - - protein kinase containing Z-DNA binding domains [Source:ZFIN;Acc:ZDB-GENE-050301-2]
77. arnt ENSDARG00000021855, ENSDARG00000115999 32 0.896 - - - - - 0.896 - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
78. CT990561.1 ENSDARG00000058284 566 0.884 - - - - - - - - 0.884 EPH receptor A5 [Source:NCBI gene;Acc:797595]
79. supt3h ENSDARG00000098141 18 0.874 - - 0.874 - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
80. cdc42ep2 ENSDARG00000053959 32 0.871 - - - - 0.871 - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
81. tlx2 ENSDARG00000011273 870 0.869 - - - - - - - 0.869 - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
82. ARHGAP6 33 0.869 - - - - - - - - 0.869 Rho GTPase activating protein 6
83. csrp3 ENSDARG00000101706 21 0.869 - - - - - - - 0.869 - cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
84. BX005234.1 ENSDARG00000097761 3 0.865 - - - - - - - 0.865 -
85. s100t ENSDARG00000055589 453 0.865 - - - - 0.865 - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
86. slc24a3 ENSDARG00000006760 418 0.865 - - - - - 0.865 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
87. syt10 ENSDARG00000045750, ENSDARG00000110484 108 0.863 - - - - - 0.863 - - - synaptotagmin X [Source:ZFIN;Acc:ZDB-GENE-041210-297]
88. rx2 ENSDARG00000040321 112 0.861 - - - 0.861 - - - - - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
89. FNDC7_2 FNDC7_2 18 0.859 - - 0.859 - - - - - -
90. CABZ01057951.1 CABZ01057951.1 10 0.859 - - 0.859 - - - - - -
91. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 0.858 - - - - - 0.858 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
92. si:ch211-251p5.3 si:ch211-251p5.3 39 0.858 - - - - - 0.858 - - -
93. mfi2 224 0.858 - - - - - 0.858 - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
94. BX470224.1 ENSDARG00000092793 22 0.856 - - - - - 0.856 - - -
95. nif3l1 ENSDARG00000045249 28 0.855 - - - - 0.855 - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
96. si:ch211-245h7.2 si:ch211-245h7.2 317 0.847 - - - - - 0.847 - - -
97. vav3b ENSDARG00000073713, ENSDARG00000075962 26 0.847 - - - - - 0.847 - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
98. pax2b ENSDARG00000032578 12 0.847 - - - - 0.847 - - - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
99. CR391995.1 ENSDARG00000098041 48 0.847 - - - - 0.847 - - - -
100. dennd2db ENSDARG00000030250 24 0.847 - - - - - - 0.847 - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA