Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL7A1

Gene Name Gene ID Reads Annotation
COL7A1 6 collagen, type VII, alpha 1, transcript variant X7











Genes with expression patterns similar to COL7A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL7A1 6 3 - - 1.000 1.000 - 1.000 - - - - collagen, type VII, alpha 1, transcript variant X7
2. PPP1R3A ENSGALG00000009435 3 1 - - - 1.000 - - - - - - protein phosphatase 1 regulatory subunit 3A [Source:HGNC Symbol;Acc:HGNC:9291]
3. KCNJ5 ENSGALG00000001181 11 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
4. ART4 ENSGALG00000011742 4 1 - - - 1.000 - - - - - - ADP-ribosyltransferase 4 (Dombrock blood group) [Source:NCBI gene;Acc:427879]
5. ENG ENSGALG00000033039 169 1 - - - 1.000 - - - - - - endoglin [Source:NCBI gene;Acc:771557]
6. ENSGALG00000024029 ENSGALG00000024029 2 1 - - - 1.000 - - - - - -
7. LMOD3 ENSGALG00000018946 7 1 - - - 1.000 - - - - - - leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
8. EPB42 ENSGALG00000021230 20 0.993 - - - - - 0.993 - - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
9. BSND ENSGALG00000043998 11 0.992 - - - - - 0.992 - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
10. RNP ENSGALG00000028991 10 0.992 - - - - - 0.992 - - - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
11. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.992 - - - - - 0.992 - - - - homer scaffolding protein 3, transcript variant X4
12. TFF2 ENSGALG00000016165 1 0.992 - - - - - 0.992 - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
13. FOXRED2 ENSGALG00000012530 36 0.992 - - - - - 0.992 - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
14. LRRC8A ENSGALG00000004573 2 0.992 - - - - - 0.992 - - - - leucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]
15. PLA2G6 ENSGALG00000012281 2 0.992 - - - - - 0.992 - - - - phospholipase A2 group VI [Source:NCBI gene;Acc:418028]
16. HINT2 ENSGALG00000027418 10 0.992 - - - - - 0.992 - - - - histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
17. MYH13 4 0.992 - - - - - 0.992 - - - - myosin, heavy chain 13, skeletal muscle
18. SRMS ENSGALG00000005852 174 0.992 - - - - - 0.992 - - - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
19. KBTBD11 ENSGALG00000022887 168 0.992 - - - - - 0.992 - - - - kelch repeat and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29104]
20. TLR7 ENSGALG00000016590 6 0.992 - - - - - 0.992 - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
21. NANOG ENSGALG00000027772 89 0.992 - - - - - 0.992 - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
22. PKHD1 ENSGALG00000042136 8 0.992 - - - - - 0.992 - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
23. ENSGALG00000027467 ENSGALG00000027467 1 0.992 - - - - - 0.992 - - - -
24. ENSGALG00000026365 ENSGALG00000026365 1 0.992 - - - - - 0.992 - - - -
25. ENSGALG00000009777 ENSGALG00000009777 3 0.992 - - - - - 0.992 - - - -
26. ALPL ENSGALG00000023542 6 0.992 - - - - - 0.992 - - - - alkaline phosphatase, liver/bone/kidney [Source:NCBI gene;Acc:396317]
27. PPP1R3E ENSGALG00000003492, ENSGALG00000041047 376 0.992 - - - - - 0.992 - - - - protein phosphatase 1 regulatory subunit 3E [Source:HGNC Symbol;Acc:HGNC:14943]
28. HPRTL ENSGALG00000005361 31 0.992 - - - - - 0.992 - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
29. IKBKE ENSGALG00000013356 1 0.992 - - - - - 0.992 - - - - inhibitor of nuclear factor kappa B kinase subunit epsilon [Source:HGNC Symbol;Acc:HGNC:14552]
30. GZMM ENSGALG00000015192 8 0.992 - - - - - 0.992 - - - - granzyme M
31. FAM73B FAM73B 2 0.992 - - - - - 0.992 - - - -
32. TANC2 26 0.992 - - - - - 0.992 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
33. FNDC7 ENSGALG00000001983 24 0.992 - - - - - 0.992 - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
34. ANO3 ENSGALG00000013311 16 0.992 - - - - - 0.992 - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
35. SOHYE2L ENSGALG00000007118 1 0.992 - - - - - 0.992 - - - - sodium/hydrogen exchanger 2-like
36. ENSGALG00000023424 ENSGALG00000023424 1 0.992 - - - - - 0.992 - - - -
37. SLC4A5 ENSGALG00000032146 3 0.992 - - - - - 0.992 - - - - solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
38. IL10R2 IL10R2 72 0.992 - - - - - 0.992 - - - -
39. SYPL1 ENSGALG00000029006 126 0.992 - - - - - 0.992 - - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
40. MAL ENSGALG00000008552 4 0.992 - - - - - 0.992 - - - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
41. FAM43B ENSGALG00000026367 2 0.992 - - - - - 0.992 - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
42. HSD11B1L ENSGALG00000012860 4 0.992 - - - - - 0.992 - - - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
43. CPN2 ENSGALG00000045776 18 0.978 - - - - - 0.978 - - - - carboxypeptidase N subunit 2
44. SGIP1 ENSGALG00000011113 20 0.948 - - - 0.948 - - - - - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
45. OTOG ENSGALG00000006208 17 0.948 - - - - - 0.948 - - - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
46. STARD3 ENSGALG00000014607 115 0.947 - - 0.947 - - - - - - - StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]
47. U1 U1 1 0.947 - - 0.947 - - - - - - -
48. RUNDC3A ENSGALG00000026518 2 0.947 - - 0.947 - - - - - - - RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
49. PRKD3 ENSGALG00000010612 2 0.947 - - 0.947 - - - - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
50. ITPRIP ENSGALG00000025780 4 0.947 - - 0.947 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
51. HID1 ENSGALG00000007808 2 0.947 - - 0.947 - - - - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
52. BPIFB4 ENSGALG00000006679 1 0.947 - - 0.947 - - - - - - - BPI fold containing family B member 4 [Source:HGNC Symbol;Acc:HGNC:16179]
53. GGCL1 GGCL1 3 0.947 - - 0.947 - - - - - - -
54. P2RY14 ENSGALG00000040367 1 0.947 - - 0.947 - - - - - - - purinergic receptor P2Y, G-protein coupled, 14 [Source:NCBI gene;Acc:101749627]
55. BCO2 ENSGALG00000007868 1 0.947 - - 0.947 - - - - - - - beta-carotene oxygenase 2 [Source:HGNC Symbol;Acc:HGNC:18503]
56. HPGD ENSGALG00000010769 5 0.947 - - 0.947 - - - - - - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
57. BSN ENSGALG00000001849 1 0.947 - - 0.947 - - - - - - - bassoon presynaptic cytomatrix protein [Source:HGNC Symbol;Acc:HGNC:1117]
58. PRA1 PRA1 2 0.947 - - 0.947 - - - - - - -
59. BFSP1 ENSGALG00000008735 17 0.943 - - - 0.943 - - - - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
60. ADAM33 ENSGALG00000030602 7 0.941 - - - - - 0.941 - - - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
61. DMGDH ENSGALG00000004491 15 0.941 - - - - - 0.941 - - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
62. CRTAM ENSGALG00000006527 6 0.941 - - - - - 0.941 - - - - cytotoxic and regulatory T cell molecule [Source:NCBI gene;Acc:395342]
63. ENSGALG00000005097 ENSGALG00000005097 85 0.936 - - - - - 0.936 - - - -
64. C1QTNF9 ENSGALG00000017117 7 0.931 - - - - - 0.931 - - - - C1q and tumor necrosis factor related protein 9, transcript variant X2
65. PYROXD2 ENSGALG00000007014 14 0.928 - - - - - 0.928 - - - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
66. ENSGALG00000004703 ENSGALG00000004703 112 0.922 - - - - - 0.922 - - - -
67. NPPA ENSGALG00000004574 226 0.916 - - - - - 0.916 - - - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
68. ENSGALG00000026671 ENSGALG00000026671 4 0.912 - - 0.912 - - - - - - -
69. PIGZ ENSGALG00000026294 99 0.908 - - - - - 0.908 - - - - phosphatidylinositol glycan anchor biosynthesis class Z, transcript variant X2
70. SIN3B ENSGALG00000003771 60 0.893 - - - - - 0.893 - - - - SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
71. NPRL2 ENSGALG00000002131 7 0.885 - - 0.885 - - - - - - - NPR2-like, GATOR1 complex subunit [Source:NCBI gene;Acc:425132]
72. GRB10 ENSGALG00000013100 37 0.885 - - - - - 0.885 - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
73. TCF4 TCF4 29 0.885 - - - - - 0.885 - - - -
74. SH3D19 ENSGALG00000010081 52 0.883 - - - - - 0.883 - - - - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
75. ENSGALG00000009485 ENSGALG00000009485 4 0.882 - - 0.882 - - - - - - -
76. VSIG1 ENSGALG00000008290 16 0.873 - - 0.873 - - - - - - - V-set and immunoglobulin domain containing 1 [Source:NCBI gene;Acc:414795]
77. CNP3 CNP3 10 0.871 - - 0.871 - - - - - - -
78. MAPK11 ENSGALG00000040023 15 0.871 - - 0.871 - - - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
79. ADAP1 ENSGALG00000003819 13 0.869 - - 0.869 - - - - - - - ArfGAP with dual PH domains 1 [Source:HGNC Symbol;Acc:HGNC:16486]
80. FRK ENSGALG00000014979 65 0.867 - - - - - 0.867 - - - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
81. ATXN10 ENSGALG00000014234 16 0.866 - - 0.866 - - - - - - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
82. ENSGALG00000005344 ENSGALG00000005344 6 0.863 - - - 0.863 - - - - - -
83. GRIN3B ENSGALG00000026241 177 0.863 - - - - - 0.863 - - - - glutamate ionotropic receptor NMDA type subunit 3B [Source:HGNC Symbol;Acc:HGNC:16768]
84. WASF3 ENSGALG00000017103 50 0.862 - - - - - 0.862 - - - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
85. TRAPPC9 ENSGALG00000042766 10 0.86 - - - 0.860 - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
86. SNORD89 SNORD89 2 0.859 - - 0.859 - - - - - - -
87. EFHC2 ENSGALG00000016221 8 0.858 - - - 0.858 - - - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
88. ABCG1 ENSGALG00000016164 10 0.854 - - 0.854 - - - - - - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
89. LIN7A ENSGALG00000010939 8 0.848 - - - - - 0.848 - - - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
90. HMHA1 HMHA1 929 0.842 - - - - - 0.842 - - - -
91. NFXL1 ENSGALG00000014138 36 0.841 - - - - - 0.841 - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
92. SOX30 ENSGALG00000045860 5 0.839 - - 0.839 - - - - - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
93. SMAD9 ENSGALG00000017050 11 0.839 - - 0.839 - - - - - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
94. MARCO ENSGALG00000012119 5 0.839 - - 0.839 - - - - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
95. GPR171 ENSGALG00000040561 12 0.839 - - 0.839 - - - - - - - G protein-coupled receptor 171 [Source:NCBI gene;Acc:101749516]
96. SLC44A3 ENSGALG00000005610 18 0.836 - - 0.836 - - - - - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
97. LPGAT1 ENSGALG00000009848 33 0.834 - - 0.834 - - - - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
98. ATP10B ENSGALG00000001662 15 0.834 - - - 0.834 - - - - - - ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
99. ARL4C ENSGALG00000021021 8 0.833 - - 0.833 - - - - - - - ADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]
100. NR4A2 ENSGALG00000012538 29 0.827 - - 0.827 - - - - - - - nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]

There are 79 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA