Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL7A1

Gene Name Gene ID Reads Annotation
COL7A1 ENSDARG00000021720 2210 collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]










Genes with expression patterns similar to COL7A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL7A1 ENSDARG00000021720 2210 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
2. wdr5 ENSDARG00000016903 4834 1.921 - 0.947 - - - - 0.974 - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
3. ptk6a ENSDARG00000017947 682 1.785 - 0.952 - - - - 0.833 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
4. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.77 0.802 0.968 - - - - - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
5. TBC1D4 ENSDARG00000075156 2503 1.764 - 0.961 - - - - 0.803 - - TBC1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9881]
6. sult1st4 ENSDARG00000003181 540 1.756 - 0.960 0.796 - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
7. dhrs9 ENSDARG00000019260 250 1.735 - 0.955 - - - - - - 0.780 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
8. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.715 - 0.963 - - - 0.752 - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
9. pfkfb3 ENSDARG00000001953 656 1.694 - 0.958 - - - - - - 0.736 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
10. ptbp3 ENSDARG00000043757 6760 1.693 - 0.970 - - - 0.723 - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
11. atp6ap1b ENSDARG00000037153 3970 1.681 0.735 0.946 - - - - - - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
12. tmed1a ENSDARG00000031325 1936 1.67 - 0.958 0.712 - - - - - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
13. gas1a ENSDARG00000077298 10891 1.665 - 0.746 - - - - 0.919 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
14. tpm4a ENSDARG00000023963 10932 1.577 - 0.876 - - - 0.701 - - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
15. hand2 ENSDARG00000008305 1214 1.577 - - - - - 0.750 0.827 - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
16. MREG MREG 687 1.574 - - - - - 0.828 - - 0.746
17. sh3bgrl3 ENSDARG00000098075 3071 1.569 - - - - - 0.767 0.802 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
18. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.566 - - 0.789 - - - - - 0.777 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
19. lect2l ENSDARG00000033227 482 1.556 - - 0.746 - - - 0.810 - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
20. AL929007.2 AL929007.2 117 1.555 - - 0.808 - - 0.747 - - -
21. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.55 - - - - - 0.717 0.833 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
22. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.547 - - 0.723 - - - 0.824 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
23. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.545 0.720 - - - - - 0.825 - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
24. gskip ENSDARG00000038099 5059 1.525 - 0.786 0.739 - - - - - - gsk3b interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2777]
25. si:ch211-251f6.6 ENSDARG00000053448 323 1.511 0.706 - 0.805 - - - - - - si:ch211-251f6.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3219]
26. b3gnt3.1 ENSDARG00000043482 1991 1.509 0.716 - - - - - 0.793 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
27. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.504 0.703 - - - - - - - 0.801 aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
28. dse ENSDARG00000017988 2169 1.495 - - - - - 0.724 - - 0.771 dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
29. zgc:77439 ENSDARG00000039211 1492 1.487 - - 0.753 - - - 0.734 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
30. fpr1 ENSDARG00000042984 66 1.478 - - 0.764 - - 0.714 - - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
31. mid1ip1l ENSDARG00000018145 2789 1.466 - - 0.757 - - - - - 0.709 MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
32. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.452 0.705 - - - - 0.747 - - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
33. tfpia ENSDARG00000034718 1257 1.429 0.717 - - - - 0.712 - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
34. tcf25 ENSDARG00000040861 1506 0.984 - - - - - - 0.984 - - transcription factor 25 (basic helix-loop-helix) [Source:ZFIN;Acc:ZDB-GENE-040905-2]
35. pomt1 ENSDARG00000067670, ENSDARG00000112005 588 0.983 - - - - - - 0.983 - - protein-O-mannosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-966]
36. C22H6orf89 C22H6orf89 1076 0.983 - - - - - - 0.983 - -
37. bsnd ENSDARG00000086265 178 0.982 - - - - - - 0.982 - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
38. pcbp2 ENSDARG00000099039 4248 0.979 - - - - - - 0.979 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
39. ccnb1 ENSDARG00000051923 3226 0.979 - - - - - - 0.979 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
40. parvaa ENSDARG00000043710 3495 0.978 - - - - - - 0.978 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
41. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 0.975 - 0.975 - - - - - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
42. pacsin2 ENSDARG00000078014 1582 0.973 - 0.973 - - - - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
43. SRGAP3 ENSDARG00000060309 5353 0.972 - - - - - - 0.972 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
44. pdlim5b ENSDARG00000027600 4252 0.972 - 0.972 - - - - - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
45. slc1a5 ENSDARG00000099186 7580 0.972 - 0.972 - - - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
46. psmd14 ENSDARG00000063100 15711 0.971 - 0.971 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
47. esrp1 ENSDARG00000011245 2097 0.971 - 0.971 - - - - - - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
48. USO1 ENSDARG00000019581 1617 0.97 - 0.970 - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
49. rerea ENSDARG00000077353 4162 0.97 - 0.970 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
50. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.969 - 0.969 - - - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
51. capn2b ENSDARG00000055592 5431 0.969 - 0.969 - - - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
52. ncapd2 ENSDARG00000005058 2819 0.968 - 0.968 - - - - - - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
53. ovol1 1037 0.968 - 0.968 - - - - - - - ovo-like zinc finger 1, transcript variant X1
54. mtpn ENSDARG00000104018 4264 0.968 - 0.968 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
55. tecrb ENSDARG00000025904 4612 0.967 - 0.967 - - - - - - - trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
56. clcn5 clcn5 492 0.966 - 0.966 - - - - - - -
57. tpst1 ENSDARG00000073872 2490 0.966 - 0.966 - - - - - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
58. kif13ba ENSDARG00000079731 1726 0.965 - 0.965 - - - - - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
59. eif4ebp2 ENSDARG00000031819 13168 0.965 - 0.965 - - - - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
60. dbnla ENSDARG00000008170 2129 0.965 - - - - - - 0.965 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
61. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 0.964 - 0.964 - - - - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
62. zfyve28 ENSDARG00000060430 797 0.964 - 0.964 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
63. eny2 ENSDARG00000070046 3741 0.964 - 0.964 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
64. si:ch211-160e1.5 5586 0.963 - 0.963 - - - - - - - si:ch211-160e1.5
65. SH3D21 ENSDARG00000099448 1726 0.963 - 0.963 - - - - - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
66. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.963 - 0.963 - - - - - - -
67. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.963 - 0.963 - - - - - - - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
68. rpa1 ENSDARG00000003938 4403 0.962 - - - - - - 0.962 - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
69. sp1 ENSDARG00000088347 1697 0.962 - 0.962 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
70. SKA2 ENSDARG00000114038 1448 0.962 - 0.962 - - - - - - - spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
71. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.962 - 0.962 - - - - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
72. hsd17b14 ENSDARG00000054842 1394 0.962 - 0.962 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
73. arl8a ENSDARG00000078686 4379 0.962 - 0.962 - - - - - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
74. tsc22d1 ENSDARG00000038306 2413 0.962 - 0.962 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
75. ube2e2 ENSDARG00000034670 5918 0.961 - 0.961 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
76. aqr ENSDARG00000016775 1581 0.961 - 0.961 - - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
77. tnfaip2a ENSDARG00000043416 688 0.961 - 0.961 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
78. u2surp ENSDARG00000061490 2814 0.961 - 0.961 - - - - - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
79. map1lc3b ENSDARG00000101127 3958 0.961 - 0.961 - - - - - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
80. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 0.961 - 0.961 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
81. gna12a ENSDARG00000025826 1769 0.96 - 0.960 - - - - - - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
82. pi4kaa ENSDARG00000076724 1949 0.96 - 0.960 - - - - - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
83. sirt1 ENSDARG00000068064 1393 0.96 - 0.960 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
84. pank1b ENSDARG00000010098 3202 0.96 - 0.960 - - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
85. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 0.96 - 0.960 - - - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
86. rgs12b ENSDARG00000036774 5088 0.959 - 0.959 - - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
87. rnf7 ENSDARG00000055524 3390 0.959 - 0.959 - - - - - - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
88. appl1 1019 0.959 - 0.959 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
89. sar1b ENSDARG00000103403 1699 0.959 - 0.959 - - - - - - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
90. tnfrsf19 ENSDARG00000041869 796 0.959 - 0.959 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
91. OMG OMG 1202 0.959 - 0.959 - - - - - - -
92. eya3 ENSDARG00000036100 1965 0.959 - 0.959 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
93. igsf9a ENSDARG00000075864 1870 0.959 - 0.959 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
94. tango2 ENSDARG00000056550 1130 0.959 - 0.959 - - - - - - - transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]
95. CHD1 ENSDARG00000103787 1645 0.959 - 0.959 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
96. ppp2r5cb ENSDARG00000031200 1832 0.959 - 0.959 - - - - - - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
97. ptpn9a ENSDARG00000077495 2295 0.959 - 0.959 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
98. ccm2 ENSDARG00000013705 3464 0.958 - 0.958 - - - - - - - CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
99. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 0.958 - 0.958 - - - - - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
100. chpfa ENSDARG00000078392 1427 0.958 - 0.958 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]

There are 849 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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