Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL6A2

Gene Name Gene ID Reads Annotation
COL6A2 ENSGALG00000039216 892 collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]











Genes with expression patterns similar to COL6A2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL6A2 ENSGALG00000039216 892 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
2. TALPID3 TALPID3 1896 1.674 - - - - - - - 0.874 0.800 -
3. GSTA GSTA 3130 1.666 - - - - - - - 0.892 0.774 -
4. HSDL1 ENSGALG00000003273 1108 1.666 - - - - - - - 0.959 0.707 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
5. AP4E1 2726 1.543 - - 0.736 - - - - 0.807 - - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
6. LRRC16A LRRC16A 2041 1.541 - - - - - - - 0.840 0.701 -
7. GPC3 ENSGALG00000006087 3744 1.463 - - - - - - - 0.706 0.757 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
8. CHUK ENSGALG00000003289 5698 0.974 - - - - - - - 0.974 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
9. CECR5L ENSGALG00000005020 116 0.97 - - - - - - - 0.970 - - cat eye syndrome chromosome region, candidate 5-like
10. DNAJC11 ENSGALG00000000627 769 0.97 - - - - - - - 0.970 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
11. LAMP2 ENSGALG00000008572 198 0.968 - - - - - - - 0.968 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
12. LIPG ENSGALG00000043734 2490 0.968 - - - - - - - 0.968 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
13. II II 929 0.966 - - - - - - - 0.966 - -
14. C4BPA ENSGALG00000001175 4278 0.966 - - - - - - - 0.966 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
15. TMEM200A ENSGALG00000002282 77 0.964 - - - - - - - 0.964 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
16. GAA ENSGALG00000038853 158 0.963 - - - - - - - 0.963 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
17. SLC25A48 ENSGALG00000006341 2606 0.963 - - - - - - - 0.963 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
18. CWH43 ENSGALG00000041921 68 0.962 - - - - - - - 0.962 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
19. VPS37A ENSGALG00000013646 55 0.962 - - - - - - - 0.962 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
20. TFG ENSGALG00000015299 849 0.962 - - - - - - - 0.962 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
21. MDM4 ENSGALG00000000636 91 0.962 - - - - - - - 0.962 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
22. YARS2 503 0.961 - - - - - - - 0.961 - - tyrosyl-tRNA synthetase 2
23. RIN3 ENSGALG00000010806 729 0.961 - - - - - - - 0.961 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
24. FUBP1 ENSGALG00000008939 2850 0.961 - - - - - - - 0.961 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
25. PYGL ENSGALG00000012365 4691 0.961 - - - - - - - 0.961 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
26. HSPA13 ENSGALG00000019201 712 0.961 - - - - - - - 0.961 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
27. SEMA3E ENSGALG00000038225 677 0.96 - - - - - - - 0.960 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
28. SOX5 ENSGALG00000032768 998 0.959 - - - - - - - 0.959 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
29. SLC30A2 ENSGALG00000010375 44 0.959 - - - - - - - 0.959 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
30. EX-FABP EX-FABP 516 0.959 - - - - - - - 0.959 - -
31. KIAA0930 ENSGALG00000014226 1243 0.959 - - - - - - - 0.959 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
32. PHLPP2 ENSGALG00000000875 561 0.958 - - - - - - - 0.958 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
33. DSG2 ENSGALG00000015142 67 0.957 - - - - - - - 0.957 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
34. TRMT61B ENSGALG00000008979 615 0.956 - - - - - - - 0.956 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
35. ARAP2 ENSGALG00000041373 233 0.956 - - - - - - - 0.956 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
36. TES ENSGALG00000031934 5908 0.956 - - - - - - - 0.956 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
37. CASP7 ENSGALG00000008933 506 0.956 - - - - - - - 0.956 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
38. TRIM62 ENSGALG00000028437 5124 0.956 - - - - - - - 0.956 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
39. LOC422106 ENSGALG00000019757 453 0.955 - - - - - - - 0.955 - - uncharacterized LOC422106
40. ORAI1 ENSGALG00000004240 515 0.954 - - - - - - - 0.954 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
41. CENPC1 CENPC1 3324 0.953 - - - - - - - 0.953 - -
42. NRG4 ENSGALG00000002952 1440 0.953 - - - - - - - 0.953 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
43. H4-I H4-I 2327 0.952 - - - - - - - 0.952 - -
44. STK17B ENSGALG00000007924 519 0.952 - - - - - - - 0.952 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
45. GPX7 ENSGALG00000010633 7224 0.952 - - - - - - - 0.952 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
46. ZBTB26 ENSGALG00000042762 1920 0.952 - - - - - - - 0.952 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
47. ANKRD40L ENSGALG00000026189 887 0.951 - - - - - - - 0.951 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
48. B3GNT7 ENSGALG00000007701 929 0.951 - - - - - - - 0.951 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
49. RASGEF1A ENSGALG00000002525 918 0.951 - - - - - - - 0.951 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
50. ENSGALG00000001854 ENSGALG00000001854 965 0.951 - - - - - - - 0.951 - -
51. ENSGALG00000016572 ENSGALG00000016572 79 0.95 - - - - - - - 0.950 - -
52. ECI2 ENSGALG00000012809 3692 0.95 - - - - - - - 0.950 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
53. ENSGALG00000014946 ENSGALG00000014946 40 0.949 - - - - - - - - 0.949 -
54. PPP1R13B ENSGALG00000011548 88 0.948 - - - - - - - - 0.948 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
55. CLUH ENSGALG00000005854 2100 0.948 - - - - - - - 0.948 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
56. TOX ENSGALG00000039102 1434 0.948 - - - - - - - 0.948 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
57. TMEM69 ENSGALG00000010279 716 0.946 - - - - - - - - 0.946 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
58. ANXA6 ENSGALG00000004357 2891 0.946 - - - - - - - 0.946 - - annexin A6 [Source:NCBI gene;Acc:395481]
59. GEM ENSGALG00000032506 439 0.945 - - - - - - - - 0.945 - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
60. AMER1 ENSGALG00000007599 994 0.945 - - - - - - - 0.945 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
61. TRAM2 ENSGALG00000016673 438 0.945 - - - - - - - 0.945 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
62. SENP5 ENSGALG00000008545 909 0.944 - - - - - - - 0.944 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
63. LRRC45 ENSGALG00000002877 1751 0.943 - - - - - - - 0.943 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
64. EDA ENSGALG00000035966 602 0.942 - - - - - - - 0.942 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
65. GADD45 GADD45 8780 0.941 - - - - - - - 0.941 - -
66. PCDH20 ENSGALG00000016934 187 0.941 - - - - - - - - 0.941 - protocadherin 20
67. CCDC51 ENSGALG00000006465 1845 0.94 - - - - - - - 0.940 - - coiled-coil domain containing 51, transcript variant X1
68. SEC11C ENSGALG00000031663 4266 0.94 - - - - - - - 0.940 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
69. TM2D3 ENSGALG00000026271 2566 0.94 - - - - - - - 0.940 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
70. UBA7 ENSGALG00000036263 2918 0.938 - - - - - - - 0.938 - - ubiquitin-like modifier activating enzyme 7
71. PSMD1 ENSGALG00000007664 7609 0.938 - - - - - - - 0.938 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
72. ITGA8 ENSGALG00000008747 406 0.938 - - - - - - - - 0.938 - integrin subunit alpha 8 [Source:NCBI gene;Acc:396225]
73. PAMR1 ENSGALG00000007886 928 0.938 - - - - - - - 0.938 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
74. SALL1 ENSGALG00000039238 3740 0.936 - - - - - - - 0.936 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
75. HDAC4 ENSGALG00000004288 2124 0.936 - - - - - - - 0.936 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
76. LDHA ENSGALG00000006300 4796 0.932 - - - - - - - 0.932 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
77. MRC1 ENSGALG00000008629 259 0.932 - - - - - - - 0.932 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
78. TDRD7 ENSGALG00000012350 594 0.93 - - - - - - - - 0.930 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
79. ENSGALG00000008689 ENSGALG00000008689 232 0.929 - - - - - - - - 0.929 -
80. E2F4 ENSGALG00000001722 2916 0.928 - - - - - - - 0.928 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
81. SLC41A1 ENSGALG00000000721 1604 0.928 - - - - - - - 0.928 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
82. CHALK5 CHALK5 1351 0.928 - - - - - - - 0.928 - -
83. PINK1 ENSGALG00000037593 3794 0.928 - - - - - - - 0.928 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
84. RREB1 ENSGALG00000012799 125 0.928 - - - - - - - - 0.928 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
85. TCEANC ENSGALG00000016581 948 0.927 - - - - - - - 0.927 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
86. ENSGALG00000004032 ENSGALG00000004032 2010 0.927 - - - - - - - 0.927 - -
87. CHKA ENSGALG00000036754 5077 0.926 - - - - - - - 0.926 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
88. NIT1 ENSGALG00000007585 1256 0.925 - - - - - - - 0.925 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
89. ENSGALG00000014441 ENSGALG00000014441 1442 0.925 - - - - - - - 0.925 - -
90. TAPT1 ENSGALG00000014486 2022 0.924 - - - - - - - - 0.924 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
91. ISCA2 ENSGALG00000020417 1130 0.924 - - - - - - - 0.924 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
92. GALK2 ENSGALG00000036201 1016 0.923 - - - - - - - 0.923 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
93. PRPSAP1 ENSGALG00000021539 3517 0.922 - - - - - - - 0.922 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
94. NXT2 ENSGALG00000008092 2477 0.919 - - - - - - - 0.919 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
95. ENSGALG00000006569 ENSGALG00000006569 2169 0.919 - - - - - - - 0.919 - -
96. ABCB10 ENSGALG00000011096 1407 0.919 - - - - - - - 0.919 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
97. LTV1 ENSGALG00000013765 2917 0.918 - - - - - - - 0.918 - - LTV1 ribosome biogenesis factor
98. DBR1 ENSGALG00000043797 1896 0.913 - - - - - - - 0.913 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
99. MAPKKK3L ENSGALG00000005884 1011 0.913 - - - - - - - 0.913 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
100. RPAP2 ENSGALG00000005953 2085 0.912 - - - - - - - 0.912 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]

There are 382 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA