Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL5A2

Gene Name Gene ID Reads Annotation
COL5A2 ENSGALG00000031112 18358 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]











Genes with expression patterns similar to COL5A2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL5A2 ENSGALG00000031112 18358 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
2. MYO1B ENSGALG00000007712 8755 2.275 - - - - 0.714 - 0.846 - 0.715 - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
3. GXYLT1 ENSGALG00000009532 5682 1.69 - - - - - - 0.774 - - 0.916 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
4. ASB9 ENSGALG00000016563 2780 1.655 - - - - - - 0.762 - - 0.893 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
5. HOTAIRM1 HOTAIRM1 4335 1.653 - - - - - - 0.755 - - 0.898
6. RER1 ENSGALG00000021683 9074 1.652 - - - - - - - 0.718 - 0.934 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
7. SMC4 ENSGALG00000009553 15715 1.647 - - - - - - 0.756 - - 0.891 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
8. CDH11 ENSGALG00000039985 18212 1.643 - - - - - 0.788 0.855 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
9. RDH10 ENSGALG00000034346 15285 1.637 - - - - - 0.769 0.868 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
10. PDE3B ENSGALG00000006035 3732 1.635 - - - - - - 0.750 - - 0.885 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
11. KIAA1551 ENSGALG00000045168 3435 1.625 - - - - - - 0.700 - - 0.925 KIAA1551, transcript variant X1
12. LEPROT ENSGALG00000011047 7132 1.624 - - - - - - - 0.743 - 0.881 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
13. TBX3 ENSGALG00000036043 2888 1.624 - - - - - - 0.804 - - 0.820 T-box 3 [Source:NCBI gene;Acc:374202]
14. BRT-1 BRT-1 26083 1.616 - - - - - - - 0.735 - 0.881
15. ANKRD17 ENSGALG00000011642 3192 1.616 - - - - - - - - 0.709 0.907 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
16. UCHL3 ENSGALG00000016921 16208 1.61 - - - - - - 0.729 - - 0.881 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
17. AGPS ENSGALG00000009236 2250 1.609 - - - - - - 0.761 - - 0.848 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
18. RAMP2 ENSGALG00000024449 5860 1.603 - - - - - - 0.706 - - 0.897 receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
19. VWF ENSGALG00000017272 1012 1.603 - - - - - - 0.719 - - 0.884 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
20. CIB1 ENSGALG00000008302 13946 1.589 - - - - - - 0.778 - - 0.811 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
21. SNAI1 ENSGALG00000008018 3930 1.576 - - - - - - 0.739 - - 0.837 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
22. YIPF3 ENSGALG00000041037 6126 1.574 - - - - - - 0.714 - - 0.860 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
23. PHLDB2 ENSGALG00000015377 8560 1.571 - - - - - - 0.842 0.729 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
24. QDPR ENSGALG00000030070 6953 1.567 - - - - - - 0.728 - - 0.839 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
25. CLIC4 ENSGALG00000001262 11497 1.559 - - - - - - 0.724 - - 0.835 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
26. FANCL ENSGALG00000030022 7423 1.552 - - - - - - 0.703 - - 0.849 FA complementation group L [Source:NCBI gene;Acc:421202]
27. CTSO ENSGALG00000009373 4186 1.552 - - - - - - - - 0.729 0.823 cathepsin O [Source:NCBI gene;Acc:422410]
28. ERCC6 ENSGALG00000006254 3452 1.552 - - - - - - 0.700 - - 0.852 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
29. RPF2 ENSGALG00000037087 12788 1.546 - - - - - - 0.730 - - 0.816 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
30. UTP23 ENSGALG00000032400 3601 1.544 - - - - - - 0.718 - - 0.826 UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
31. ITGB1 ENSGALG00000007145 19551 1.543 - - - - - - 0.839 - 0.704 - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
32. MYL9 ENSGALG00000028567 36256 1.541 - - 0.718 - - - 0.823 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
33. NAA30 ENSGALG00000012098 4681 1.54 - - - - - - 0.753 - - 0.787 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
34. NRSN1 ENSGALG00000037811 11424 1.535 - - - - - - 0.736 - - 0.799 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
35. SPARC ENSGALG00000004184 36410 1.527 - - 0.747 - - - 0.780 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
36. RAB10 ENSGALG00000016535 5272 1.526 - - - - - - 0.729 - - 0.797 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
37. COX5A ENSGALG00000014121 55281 1.525 - - - - - - 0.704 - - 0.821 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
38. KDELR2 ENSGALG00000040793 29669 1.519 - - - - - - 0.723 0.796 - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
39. SNAI2 ENSGALG00000030902 8201 1.508 - - - - - 0.736 0.772 - - - snail family transcriptional repressor 2
40. SPG21 ENSGALG00000007262 8050 1.5 - - - - - - 0.749 - - 0.751 SPG21, maspardin [Source:NCBI gene;Acc:415526]
41. SRF ENSGALG00000032029 6983 1.491 - - - - - - - 0.722 - 0.769 serum response factor [Source:NCBI gene;Acc:396103]
42. SHISA5 ENSGALG00000004661 8573 1.48 - - - - 0.701 - 0.779 - - - shisa family member 5 [Source:NCBI gene;Acc:415948]
43. SEC63 ENSGALG00000015308 11596 1.479 - - - - - - 0.733 0.746 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
44. LMO7 ENSGALG00000016920 3809 1.47 - - - - - - 0.711 - - 0.759 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
45. CCDC85A ENSGALG00000043080 7624 1.465 - - - - - - - 0.751 - 0.714 coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
46. HLX ENSGALG00000037257 5834 1.453 - - - - - 0.721 0.732 - - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
47. GID8 ENSGALG00000005700 3992 1.451 - - - - - - - - 0.701 0.750 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
48. LDB2 ENSGALG00000014485 22490 1.424 - - - - - - 0.700 - - 0.724 LIM domain binding 2 [Source:NCBI gene;Acc:395631]
49. C3H6ORF72 C3H6ORF72 1471 1.422 - - - - - - 0.712 - - 0.710
50. MGA 1911 0.941 - - - - - - - - - 0.941 MGA, MAX dimerization protein, transcript variant X15
51. FECH ENSGALG00000038461 3491 0.937 - - - - - - - - - 0.937 ferrochelatase [Source:NCBI gene;Acc:374020]
52. FASTKD3 ENSGALG00000033521 1186 0.933 - - - - - - - - - 0.933 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
53. ENSGALG00000005389 ENSGALG00000005389 553 0.931 - - - - - - - - - 0.931
54. PLA2G15 ENSGALG00000041787 762 0.93 - - - - - - - - - 0.930 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
55. PTX3 ENSGALG00000028284 2984 0.925 - - - - - - - - - 0.925 pentraxin 3 [Source:NCBI gene;Acc:548626]
56. FBXO25 ENSGALG00000016359 1547 0.925 - - - - - - - - - 0.925 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
57. ARPC1B ENSGALG00000032588 2407 0.925 - - - - - - - - - 0.925 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
58. FSTL4 ENSGALG00000031487 529 0.924 - - - - - - - - - 0.924 follistatin like 4 [Source:NCBI gene;Acc:395163]
59. SOX6 ENSGALG00000006074 102 0.923 - - - - - - - - - 0.923 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
60. LRRN4 ENSGALG00000008815 481 0.923 - - - - - - - - - 0.923 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
61. ITSN2 ENSGALG00000016504 651 0.922 - - - - - - - - - 0.922 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
62. APBA3 ENSGALG00000000740 1249 0.922 - - - - - - - - - 0.922 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
63. PROM1 ENSGALG00000014496 2494 0.922 - - - - - - - - - 0.922 prominin 1 [Source:NCBI gene;Acc:422825]
64. FAM190B FAM190B 165 0.922 - - - - - - - - - 0.922
65. HYAL3 ENSGALG00000029000 712 0.921 - - - - - - - - - 0.921 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
66. MRPL50 ENSGALG00000015543 11649 0.921 - - - - - - - - - 0.921 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
67. PDPN ENSGALG00000030096 647 0.921 - - - - - - - - - 0.921 podoplanin, transcript variant X4
68. GRK4 ENSGALG00000015645 1065 0.921 - - - - - - - - - 0.921 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
69. MYH1D ENSGALG00000027323 365 0.921 - - - - - - - - - 0.921 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
70. 5S_2 5S_2 58 0.92 - - - - - - - - - 0.920
71. IL10R2 IL10R2 72 0.92 - - - - - - - - - 0.920
72. CPNE2 ENSGALG00000001316 236 0.92 - - - - - - - - - 0.920 copine 2 [Source:NCBI gene;Acc:415646]
73. SLC2A3 SLC2A3 527 0.919 - - - - - - - - - 0.919
74. SUV39H2 ENSGALG00000013920 4360 0.919 - - - - - - - - - 0.919 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
75. ITGA9 ENSGALG00000029378 415 0.919 - - - - - - - - - 0.919 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
76. RHOT1 ENSGALG00000003397 5149 0.919 - - - - - - - - - 0.919 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
77. ARHGAP21 ENSGALG00000007721 3961 0.918 - - - - - - - - - 0.918 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
78. WRNIP1 ENSGALG00000012856 1954 0.918 - - - - - - - - - 0.918 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
79. ZNF6 ZNF6 138 0.918 - - - - - - - - - 0.918
80. CASKIN1 604 0.918 - - - - - - - - - 0.918 CASK interacting protein 1, transcript variant X4
81. CXADR ENSGALG00000015701 96 0.917 - - - - - - - - - 0.917 coxsackie virus and adenovirus receptor, transcript variant X2
82. WDSUB1 ENSGALG00000012574 2038 0.917 - - - - - - - - - 0.917 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
83. PCLO 249 0.916 - - - - - - - - - 0.916 piccolo presynaptic cytomatrix protein
84. AURKA ENSGALG00000007768 793 0.916 - - - - - - - - - 0.916 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
85. IDS ENSGALG00000009154 1177 0.916 - - - - - - - - - 0.916 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
86. LOC770492 ENSGALG00000027778 695 0.916 - - - - - - - - - 0.916 ras-related and estrogen-regulated growth inhibitor-like
87. BRD1 ENSGALG00000029379 6047 0.916 - - - - - - - - - 0.916 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
88. SSH1 ENSGALG00000004928 222 0.916 - - - - - - - - - 0.916 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
89. DIAPH3 ENSGALG00000016937 1069 0.915 - - - - - - - - - 0.915 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
90. N4BP2 ENSGALG00000014281 3144 0.915 - - - - - - - - - 0.915 NEDD4 binding protein 2, transcript variant X6
91. AGGF1 ENSGALG00000004311 3011 0.914 - - - - - - - - - 0.914 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
92. RTN4R ENSGALG00000007732 1515 0.914 - - - - - - - - - 0.914 reticulon 4 receptor
93. CCNE2 ENSGALG00000040794 1229 0.914 - - - - - - - - - 0.914 cyclin E2 [Source:NCBI gene;Acc:420231]
94. TMEM130 ENSGALG00000003569 949 0.914 - - - - - - - - - 0.914 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
95. PM20D2 ENSGALG00000015779 1301 0.914 - - - - - - - - - 0.914 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
96. HAPLN1 ENSGALG00000015627 14942 0.914 - - - - - - 0.914 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
97. CETN1 ENSGALG00000026741 7243 0.913 - - - - - - - - - 0.913 centrin 1 [Source:NCBI gene;Acc:422668]
98. MTSS1 ENSGALG00000041969 1312 0.913 - - - - - - - - - 0.913 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
99. KLHL7 ENSGALG00000010938 528 0.912 - - - - - - - - - 0.912 kelch like family member 7 [Source:NCBI gene;Acc:420612]
100. ACADL ENSGALG00000002891 8058 0.912 - - - - - - - - - 0.912 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]

There are 718 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA