Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A6

Gene Name Gene ID Reads Annotation
COL4A6 ENSGALG00000008266 6374 collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]











Genes with expression patterns similar to COL4A6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A6 ENSGALG00000008266 6374 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
2. NOC4L ENSGALG00000002272 9644 1.715 - - - - - - 0.815 0.900 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
3. UTP11L UTP11L 11927 1.619 - - - - - - 0.787 0.832 - -
4. MRPS17 ENSGALG00000002379 30243 1.617 - - - - - - 0.711 0.906 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
5. CENPP ENSGALG00000004687 6707 1.616 - - - - - - 0.731 0.885 - - centromere protein P [Source:NCBI gene;Acc:415952]
6. LEPREL4 LEPREL4 5609 1.565 - - - - - - 0.758 - 0.807 -
7. PRKG1 ENSGALG00000003805 4654 0.99 - - - - - - - 0.990 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
8. MMADHC ENSGALG00000012473 9026 0.962 - - - - - - - 0.962 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
9. KIAA0895L 1739 0.933 - - - - - - - 0.933 - - KIAA0895 like, transcript variant X4
10. NPFF1 NPFF1 3177 0.933 - - - - - - - 0.933 - -
11. SCLT1 2397 0.933 - - - - - - - 0.933 - - sodium channel and clathrin linker 1, transcript variant X6
12. FXN ENSGALG00000015108 1867 0.933 - - - - - - - 0.933 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
13. MADD ENSGALG00000008181 2273 0.933 - - - - - - - 0.933 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
14. CARKD CARKD 2914 0.933 - - - - - - - 0.933 - -
15. GGA3 ENSGALG00000007992 3566 0.933 - - - - - - - 0.933 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
16. UBALD1 ENSGALG00000007619 8536 0.933 - - - - - - - 0.933 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
17. FAM125B FAM125B 2953 0.933 - - - - - - - 0.933 - -
18. YTHDC2 2266 0.933 - - - - - - - 0.933 - - YTH domain containing 2, transcript variant X3
19. JKAMP ENSGALG00000012009 5781 0.932 - - - - - - - 0.932 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
20. ENSGALG00000010034 ENSGALG00000010034 3293 0.932 - - - - - - - 0.932 - -
21. PDCD2L 4843 0.932 - - - - - - - 0.932 - - programmed cell death 2-like
22. TMTC2 ENSGALG00000010975 7040 0.932 - - - - - - - 0.932 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
23. RNF113A ENSGALG00000000538 3985 0.932 - - - - - - - 0.932 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
24. HBXIP HBXIP 8637 0.932 - - - - - - - 0.932 - -
25. ATL1 ENSGALG00000012339 3789 0.931 - - - - - - - 0.931 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
26. EIF3D ENSGALG00000012529 40887 0.931 - - - - - - - 0.931 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
27. RRN3 ENSGALG00000041989 3934 0.931 - - - - - - - 0.931 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
28. RIC8A ENSGALG00000004191 6094 0.931 - - - - - - - 0.931 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
29. PGM1 ENSGALG00000011016 3391 0.93 - - - - - - - 0.930 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
30. RBFA ENSGALG00000036067 6542 0.929 - - - - - - - 0.929 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
31. CHMP5 ENSGALG00000013160 13347 0.929 - - - - - - - 0.929 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
32. DDX24 ENSGALG00000010884 5485 0.928 - - - - - - - 0.928 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
33. CHTOP ENSGALG00000042129 24112 0.925 - - - - - - - 0.925 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
34. CASP3 ENSGALG00000010638 11572 0.921 - - - - - - - 0.921 - - caspase 3 [Source:NCBI gene;Acc:395476]
35. ARHGAP11A ENSGALG00000009731 6817 0.92 - - - - - - - 0.920 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
36. NECAP1 ENSGALG00000037656 5181 0.919 - - - - - - - 0.919 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
37. NDUFA2 ENSGALG00000040626 27899 0.908 - - - - - - - 0.908 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
38. SQLE ENSGALG00000036915 4172 0.9 - - - - - - - 0.900 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
39. SMC3 ENSGALG00000008585 16618 0.896 - - - - - - - 0.896 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
40. SEC11A ENSGALG00000037553 32123 0.895 - - - - - - - 0.895 - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
41. BSDC1 ENSGALG00000003405 3701 0.894 - - - - - - - 0.894 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
42. GCLM ENSGALG00000005782 15789 0.883 - - - - - - - 0.883 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
43. ALYREF ENSGALG00000007237 48479 0.858 - - - - - - - 0.858 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
44. ADI1 ENSGALG00000025796 8636 0.842 - - - - - - 0.842 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
45. XPC ENSGALG00000006357 2484 0.816 - - - - - - - - 0.816 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
46. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.814 - - - - - - 0.814 - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
47. DCXR ENSGALG00000002849 5390 0.813 - - - - - - 0.813 - - - dicarbonyl and L-xylulose reductase [Source:NCBI gene;Acc:374066]
48. PRPS1 ENSGALG00000004908 27994 0.81 - - - - - - - 0.810 - - phosphoribosyl pyrophosphate synthetase 1
49. HSD17B7 ENSGALG00000037852 4750 0.809 - - - - - - 0.809 - - - hydroxysteroid 17-beta dehydrogenase 7 [Source:NCBI gene;Acc:424367]
50. CCDC59 ENSGALG00000028648 9272 0.807 - - - - - - - 0.807 - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
51. HMGN2 HMGN2 158543 0.807 - - - - - - - 0.807 - -
52. CDK2AP1 ENSGALG00000034919 5469 0.804 - - - - - - 0.804 - - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
53. EIF3E ENSGALG00000037067 36561 0.804 - - - - - - - 0.804 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
54. ENSGALG00000001398 ENSGALG00000001398 3248 0.802 - - - - - - 0.802 - - -
55. SLC38A2 ENSGALG00000008497 3894 0.801 - - - - - - - - 0.801 - solute carrier family 38 member 2 [Source:NCBI gene;Acc:417807]
56. SCCPDH ENSGALG00000010641 8624 0.801 - - - - - - 0.801 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
57. SPG21 ENSGALG00000007262 8050 0.801 - - - - - - 0.801 - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
58. COMMD7 ENSGALG00000006630 11491 0.799 - - - - - - 0.799 - - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
59. PRELID1 ENSGALG00000002990 55592 0.799 - - - - - - 0.799 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
60. SNX24 ENSGALG00000018874 4482 0.798 - - - - - - - - 0.798 - sorting nexin 24 [Source:NCBI gene;Acc:426798]
61. DIMT1 ENSGALG00000020569 5150 0.798 - - - - - - 0.798 - - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
62. UCHL3 ENSGALG00000016921 16208 0.797 - - - - - - 0.797 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
63. ITGB1 ENSGALG00000007145 19551 0.796 - - - - - - 0.796 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
64. SSR3 ENSGALG00000028683 24334 0.794 - - - - - - 0.794 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
65. gga-mir-1778 ENSGALG00000025181 8765 0.793 - - - - - - 0.793 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
66. SUZ12 ENSGALG00000003277 177 0.791 - - - - - - - - 0.791 - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
67. CLINT1 ENSGALG00000003702 11269 0.789 - - - - - - 0.789 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
68. DPP7 ENSGALG00000038145 4888 0.788 - - - - - - - - 0.788 - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
69. FBXO30 ENSGALG00000041684 3033 0.788 - - - - - - 0.788 - - - F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
70. TMEM165 ENSGALG00000027886 5468 0.788 - - - - - - 0.788 - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
71. CENPO ENSGALG00000016609 1699 0.788 - - - - - - 0.788 - - - centromere protein O [Source:NCBI gene;Acc:422014]
72. PITX2 ENSGALG00000042492 20419 0.787 - - - - - - - 0.787 - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
73. PIK3IP1 ENSGALG00000006942 8388 0.787 - - - - - - - 0.787 - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
74. LSM14A ENSGALG00000004935 2741 0.786 - - - - - - 0.786 - - - LSM14A, mRNA processing body assembly factor [Source:NCBI gene;Acc:415781]
75. DDB2 ENSGALG00000008218 1513 0.786 - - - - - - - - 0.786 - damage specific DNA binding protein 2 [Source:NCBI gene;Acc:423185]
76. CRLS1 ENSGALG00000009214 8652 0.785 - - - - - - 0.785 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
77. DPYSL2 ENSGALG00000000227 9668 0.784 - - - - - - 0.784 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
78. ATP6AP1 ENSGALG00000008836 4343 0.784 - - - - - - 0.784 - - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
79. PSMC3IP ENSGALG00000019741 5428 0.783 - - - - - - 0.783 - - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
80. ZNF507 ENSGALG00000004532 78 0.783 - - - - - - - - 0.783 - zinc finger protein 507, transcript variant X2
81. NDUFV2 ENSGALG00000036625 29234 0.783 - - - - - - 0.783 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
82. NEK6 ENSGALG00000001118 20333 0.782 - - - - - - 0.782 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
83. TOX2 ENSGALG00000003106 2472 0.78 - - - - - - 0.780 - - - TOX high mobility group box family member 2, transcript variant X1
84. SLC9A6 ENSGALG00000006180 1760 0.78 - - - - - - 0.780 - - - solute carrier family 9 member A6 [Source:HGNC Symbol;Acc:HGNC:11079]
85. INCENP ENSGALG00000007537 16617 0.78 - - - - - - 0.780 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
86. NCF4 ENSGALG00000038141 216 0.78 - - - - - - - - 0.780 - neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
87. UTP20 ENSGALG00000011643 3012 0.779 - - - - - - 0.779 - - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
88. AN1ZNF5L ENSGALG00000014589 21148 0.779 - - - - - - 0.779 - - - AN1-type zinc finger protein 5-like, transcript variant X2
89. ENSGALG00000029084 ENSGALG00000029084 890 0.778 - - - - - - - - 0.778 -
90. FAM177A1 ENSGALG00000010046 4318 0.778 - - - - - - 0.778 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
91. SELT SELT 25524 0.778 - - - - - - - 0.778 - -
92. AP1M1 ENSGALG00000003959 31761 0.776 - - - - - - - 0.776 - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
93. CZH9ORF80 CZH9ORF80 12760 0.776 - - - - - - 0.776 - - -
94. PSMB2 ENSGALG00000026421 51885 0.775 - - - - - - 0.775 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
95. SF3A2 ENSGALG00000021679 12580 0.774 - - - - - - 0.774 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
96. ACTN1 ENSGALG00000042458 10477 0.774 - - - - - - 0.774 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
97. MAPRE1 ENSGALG00000006657 64346 0.773 - - - - - - - 0.773 - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
98. FKBP12 FKBP12 64317 0.773 - - - - - - 0.773 - - -
99. ASH2L ENSGALG00000003233 4814 0.773 - - - - - - 0.773 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
100. ENSGALG00000026438 ENSGALG00000026438 1589 0.773 - - - - - - 0.773 - - -

There are 286 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA