Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL4A5

Gene Name Gene ID Reads Annotation
COL4A5 ENSGALG00000008141 15874 collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]











Genes with expression patterns similar to COL4A5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A5 ENSGALG00000008141 15874 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
2. RNF11 ENSGALG00000010539 8617 1.898 - - - - 0.903 - 0.995 - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
3. BAMBI ENSGALG00000040993 7562 1.664 - - - 0.721 0.943 - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
4. UGDH ENSGALG00000041993 23474 1.604 - - - - 0.838 - 0.766 - - - UDP-glucose 6-dehydrogenase [Source:NCBI gene;Acc:422792]
5. GATA5 ENSGALG00000005352 11876 1.573 - - - 0.709 - - - - 0.864 - GATA binding protein 5 [Source:NCBI gene;Acc:396391]
6. SMAD6 ENSGALG00000025898 3144 1.537 - - - 0.818 - - - - 0.719 - SMAD family member 6 [Source:NCBI gene;Acc:374096]
7. GREB1 ENSGALG00000016455 12794 1.51 - - - 0.707 - - - - 0.803 - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
8. KRT19 ENSGALG00000019719 38711 1.428 - - - 0.713 - - - - 0.715 - keratin 19 [Source:NCBI gene;Acc:395861]
9. CTNNA1 ENSGALG00000002447 22379 0.997 - - - - - - 0.997 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
10. BCKDHB ENSGALG00000040702 9373 0.997 - - - - - - 0.997 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
11. ENSGALG00000023447 ENSGALG00000023447 17486 0.997 - - - - - - 0.997 - - -
12. RALGAPA1 ENSGALG00000010088 6005 0.996 - - - - - - 0.996 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
13. INPP5K ENSGALG00000002739 8120 0.996 - - - - - - 0.996 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
14. HEY1 ENSGALG00000035031 8795 0.996 - - - - - - 0.996 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
15. USMG5 ENSGALG00000034645 33263 0.996 - - - - - - 0.996 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
16. UFM1 ENSGALG00000017042 15794 0.996 - - - - - - 0.996 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
17. FASN ENSGALG00000040896 17372 0.996 - - - - - - 0.996 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
18. TPX2 ENSGALG00000006267 26087 0.996 - - - - - - 0.996 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
19. NUS1 ENSGALG00000014899 13352 0.996 - - - - - - 0.996 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
20. RNF4 ENSGALG00000015668 15780 0.996 - - - - - - 0.996 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
21. SESTD1 ENSGALG00000009031 13090 0.996 - - - - - - 0.996 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
22. RANBP3 ENSGALG00000000577 8856 0.995 - - - - - - 0.995 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
23. TMEM258 ENSGALG00000038292 31116 0.995 - - - - - - 0.995 - - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
24. SSB ENSGALG00000009677 25335 0.995 - - - - - - 0.995 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
25. UFSP2 ENSGALG00000010601 5809 0.994 - - - - - - 0.994 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
26. XRCC3 ENSGALG00000011533 3768 0.994 - - - - - - 0.994 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
27. ZNF385D ENSGALG00000011283 2578 0.994 - - - - - - 0.994 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
28. GCC1 ENSGALG00000033149 1915 0.994 - - - - - - 0.994 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
29. MAST4 ENSGALG00000014784 4153 0.994 - - - - - - 0.994 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
30. DGCR14 DGCR14 2633 0.994 - - - - - - 0.994 - - -
31. DNAH17 1389 0.994 - - - - - - 0.994 - - - dynein axonemal heavy chain 17, transcript variant X6
32. RWDD2B ENSGALG00000015807 3601 0.994 - - - - - - 0.994 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
33. ACAT1 ENSGALG00000017163 6239 0.994 - - - - - - 0.994 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
34. CEP19 ENSGALG00000006405 1645 0.993 - - - - - - 0.993 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
35. CKS1B ENSGALG00000028664 42261 0.993 - - - - - - 0.993 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
36. SRPR SRPR 21067 0.993 - - - - - - 0.993 - - -
37. ENSGALG00000023608 ENSGALG00000023608 1538 0.993 - - - - - - 0.993 - - -
38. PSMD7 ENSGALG00000000707 26350 0.993 - - - - - - 0.993 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
39. AP3B2 2331 0.992 - - - - - - 0.992 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X7
40. MRPS21 ENSGALG00000000456 35298 0.99 - - - - - - 0.990 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
41. CFL2 ENSGALG00000010027 16952 0.989 - - - - - - 0.989 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
42. MSH2 ENSGALG00000008962 9709 0.989 - - - - - - 0.989 - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
43. H3-IX_1 H3-IX_1 54392 0.981 - - - - - - 0.981 - - -
44. MAPRE1 ENSGALG00000006657 64346 0.974 - - - - - - 0.974 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
45. TMEM167A ENSGALG00000027332 13862 0.963 - - - - 0.963 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
46. CKAP5 ENSGALG00000008325 8494 0.953 - - - - 0.953 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
47. FOXK2 ENSGALG00000001577 6346 0.952 - - - - 0.952 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
48. HNRNPA2B1 ENSGALG00000011036 53662 0.951 - - - - - - 0.951 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
49. SUGT1 ENSGALG00000016946 22881 0.951 - - - - 0.951 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
50. MRPL32 ENSGALG00000037258 6861 0.946 - - - - 0.946 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
51. MOCS2 ENSGALG00000014906 4974 0.946 - - - - 0.946 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
52. COPA ENSGALG00000009153 11618 0.945 - - - - 0.945 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
53. CCNYL1 ENSGALG00000008485 11958 0.944 - - - - 0.944 - - - - - cyclin Y like 1
54. BRCC3 ENSGALG00000005383 4844 0.944 - - - - 0.944 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
55. MPPED1 ENSGALG00000014186 5726 0.943 - - - - 0.943 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
56. DRG1 ENSGALG00000006921 10791 0.939 - - - - 0.939 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
57. PITPNB ENSGALG00000005654 21578 0.939 - - - - - - - 0.939 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
58. SRP68 ENSGALG00000002062 7370 0.939 - - - - 0.939 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
59. MTG1 ENSGALG00000003549 5032 0.939 - - - - 0.939 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
60. RHBDF1 ENSGALG00000007434 2359 0.939 - - - - 0.939 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
61. NDUFB4 ENSGALG00000027688 8951 0.939 - - - - 0.939 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
62. MANF ENSGALG00000002362 7518 0.938 - - - - 0.938 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
63. GLB1L2 ENSGALG00000001604 4057 0.938 - - - - 0.938 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
64. TLK1 ENSGALG00000009569 5446 0.938 - - - - 0.938 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
65. ZNF217 ZNF217 14511 0.937 - - - - 0.937 - - - - -
66. WSB2 ENSGALG00000008151 13246 0.937 - - - - 0.937 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
67. RBM15B 5416 0.937 - - - - 0.937 - - - - - RNA binding motif protein 15B
68. PCIF1 ENSGALG00000023547 867 0.937 - - - - 0.937 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
69. AEN ENSGALG00000044204 2633 0.936 - - - - 0.936 - - - - - apoptosis enhancing nuclease, transcript variant X1
70. TRAM1 ENSGALG00000041112 22876 0.936 - - - - 0.936 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
71. C9orf89 C9orf89 3056 0.936 - - - - 0.936 - - - - -
72. TIMM21 ENSGALG00000013709 3215 0.936 - - - - 0.936 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
73. PDXP ENSGALG00000023131 2663 0.935 - - - - 0.935 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
74. MAP1LC3A ENSGALG00000038721 2230 0.935 - - - - 0.935 - - - - - microtubule associated protein 1 light chain 3 alpha
75. LEPREL4 LEPREL4 5609 0.935 - - - - 0.935 - - - - -
76. TMEM65 ENSGALG00000037371 776 0.935 - - - - 0.935 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
77. MAP3K13 ENSGALG00000006655 632 0.935 - - - - 0.935 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
78. MAP2K4 ENSGALG00000032178 5982 0.934 - - - - 0.934 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
79. KAT6A ENSGALG00000003641 2631 0.934 - - - - 0.934 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
80. PIK3CD ENSGALG00000002583 1036 0.934 - - - - 0.934 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
81. CDR2L ENSGALG00000026295 4142 0.934 - - - - 0.934 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
82. CSNK1E ENSGALG00000032257 2165 0.934 - - - - 0.934 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
83. SOD2 ENSGALG00000011661 13178 0.934 - - - - 0.934 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
84. DARS ENSGALG00000012355 2887 0.934 - - - - 0.934 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
85. ENSGALG00000005720 ENSGALG00000005720 1666 0.933 - - - - 0.933 - - - - -
86. LAP3 ENSGALG00000006334 21076 0.933 - - - - 0.933 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
87. RSU1 ENSGALG00000040891 12561 0.933 - - - - 0.933 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
88. FOCAD ENSGALG00000015071 3677 0.933 - - - - 0.933 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
89. NOL12 ENSGALG00000012410 5658 0.933 - - - - 0.933 - - - - - nucleolar protein 12
90. TDRD3 ENSGALG00000016936 3412 0.932 - - - - 0.932 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
91. NMT1 ENSGALG00000000857 5770 0.932 - - - - 0.932 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
92. BTBD7 4136 0.932 - - - - 0.932 - - - - - BTB domain containing 7, transcript variant X2
93. CLSPN ENSGALG00000002346 2590 0.932 - - - - 0.932 - - - - - claspin [Source:NCBI gene;Acc:428223]
94. MXD4 ENSGALG00000015688 1472 0.932 - - - - 0.932 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
95. PAXIP1 ENSGALG00000036064 3120 0.931 - - - - 0.931 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
96. ADSL ENSGALG00000012034 10280 0.931 - - - - 0.931 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
97. COPG2 ENSGALG00000008144 4542 0.93 - - - - 0.930 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
98. PRKACB ENSGALG00000028530 12506 0.93 - - - - 0.930 - - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
99. TPP2 ENSGALG00000016865 7509 0.93 - - - - 0.930 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
100. ACTR6 ENSGALG00000040976 31271 0.93 - - - - 0.930 - - - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]

There are 209 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA