Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A4

Gene Name Gene ID Reads Annotation
COL4A4 ENSGALG00000004946 22 collagen type IV alpha 4 chain, transcript variant X3











Genes with expression patterns similar to COL4A4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A4 ENSGALG00000004946 22 5 - - 1.000 1.000 1.000 - 1.000 - - 1.000 collagen type IV alpha 4 chain, transcript variant X3
2. LMOD2 ENSGALG00000008805 113 0.932 - - - - - - 0.932 - - - leiomodin 2 [Source:NCBI gene;Acc:417751]
3. COQ2 ENSGALG00000041294 25 0.851 - - - - - - 0.851 - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
4. DSEL ENSGALG00000042505 92 0.851 - - - - - - 0.851 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
5. F3 ENSGALG00000005619 110 0.851 - - - - - - 0.851 - - - coagulation factor III, tissue factor
6. TRAF1 ENSGALG00000001583 3 0.851 - - - - - - 0.851 - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
7. ENSGALG00000021472 ENSGALG00000021472 2 0.851 - - - - - - 0.851 - - -
8. KCNJ5 ENSGALG00000001181 11 0.851 - - - - - - 0.851 - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
9. SNTB2 ENSGALG00000027482 44 0.851 - - - - - - 0.851 - - - syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
10. C1orf74 ENSGALG00000001378 39 0.851 - - - - - - 0.851 - - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
11. SIK3 ENSGALG00000007144 18 0.851 - - - - - - 0.851 - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
12. WASF2 ENSGALG00000014012 30 0.851 - - - - - - 0.851 - - - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
13. TMEM56 ENSGALG00000005580 10 0.851 - - - - - - 0.851 - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
14. GOS2 GOS2 116 0.842 - - - - - - 0.842 - - -
15. ENSGALG00000027205 ENSGALG00000027205 149 0.828 - - - - - - 0.828 - - -
16. FNDC4 ENSGALG00000016507 55 0.821 - - - - - - 0.821 - - - Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318412]
17. VGLL2 ENSGALG00000014917 56 0.801 - - - - - - 0.801 - - - vestigial like family member 2 [Source:NCBI gene;Acc:421735]
18. ENSGALG00000000407 ENSGALG00000000407 32 0.794 - - - 0.794 - - - - - -
19. AMPD3 ENSGALG00000005662 5 0.787 - - 0.787 - - - - - - - adenosine monophosphate deaminase 3 [Source:NCBI gene;Acc:423041]
20. ENSGALG00000006389 ENSGALG00000006389 41 0.787 - - - - - - 0.787 - - -
21. SPTLC3 ENSGALG00000009037 35 0.786 - - - - - - 0.786 - - - serine palmitoyltransferase long chain base subunit 3 [Source:HGNC Symbol;Acc:HGNC:16253]
22. ZBTB1 ENSGALG00000011718 27 0.786 - - - - - - 0.786 - - - zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20259]
23. TAF4B ENSGALG00000015122 28 0.786 - - - - - - 0.786 - - - TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
24. MTMR14 ENSGALG00000006601 1435 0.785 - - - - - - 0.785 - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
25. JDP2 ENSGALG00000010322 11 0.785 - - - - - - - - - 0.785 Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
26. YPEL4 ENSGALG00000007374 23 0.782 - - - - - - 0.782 - - - yippee like 4 [Source:HGNC Symbol;Acc:HGNC:18328]
27. OLIG3 ENSGALG00000013862 51 0.779 - - - - - - 0.779 - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
28. ZNF516 ENSGALG00000013660 34 0.777 - - - - - - 0.777 - - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
29. ENSGALG00000024348 ENSGALG00000024348 254 0.777 - - - - - - 0.777 - - -
30. DAPK1 ENSGALG00000012608 17 0.776 - - - - - - 0.776 - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
31. CACNA1S 63 0.773 - - - - - - 0.773 - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
32. AMH ENSGALG00000036346 16 0.768 - - - - - - 0.768 - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
33. TLR15 ENSGALG00000008166 29 0.768 - - - - - - 0.768 - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
34. YWHAG ENSGALG00000017358 203 0.768 - - - - - - 0.768 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:NCBI gene;Acc:427820]
35. GHR_1 ENSGALG00000014855 198 0.763 - - - - - - 0.763 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
36. TARS2 ENSGALG00000043416 179 0.76 - - - - - - - - - 0.760 threonyl-tRNA synthetase 2, mitochondrial (putative)
37. CCDC141 ENSGALG00000020788 606 0.759 - - - - - - 0.759 - - - coiled-coil domain containing 141, transcript variant X5
38. NPPA ENSGALG00000004574 226 0.756 - - - - - - 0.756 - - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
39. SWAP70 ENSGALG00000005750 32 0.756 - - - - - - - - - 0.756 switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
40. SETD6 ENSGALG00000002247 6 0.75 - - - - - - - - - 0.750 SET domain containing 6 [Source:NCBI gene;Acc:101750922]
41. OTUD7A ENSGALG00000003802 72 0.749 - - - - - - 0.749 - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
42. SCML4 ENSGALG00000015309 499 0.746 - - - - - - 0.746 - - - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
43. VSTM2L ENSGALG00000006792 11 0.734 - - 0.734 - - - - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
44. NR4A2 ENSGALG00000012538 29 0.732 - - - - - - 0.732 - - - nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]
45. PPIL4 ENSGALG00000012364 361 0.731 - - - - - - 0.731 - - - peptidylprolyl isomerase like 4 [Source:HGNC Symbol;Acc:HGNC:15702]
46. FMR1 ENSGALG00000009177 561 0.73 - - - - - - 0.730 - - - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
47. CRYBA4 ENSGALG00000005634 56 0.729 - - - - - - 0.729 - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
48. IGF2 ENSGALG00000035282 513 0.724 - - - 0.724 - - - - - - insulin like growth factor 2 [Source:NCBI gene;Acc:395097]
49. EPHB2 ENSGALG00000004741 390 0.72 - - - - - - 0.720 - - - EPH receptor B2 [Source:NCBI gene;Acc:396513]
50. EEF2K ENSGALG00000006982 12 0.71 - - - - - - - - - 0.710 eukaryotic elongation factor 2 kinase [Source:HGNC Symbol;Acc:HGNC:24615]
51. STXBP5L ENSGALG00000032361 41 0.71 - - - 0.710 - - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
52. DYRK1A ENSGALG00000016053 345 0.707 - - - - - - 0.707 - - - dual specificity tyrosine phosphorylation regulated kinase 1A [Source:NCBI gene;Acc:395233]
53. MCUR1 ENSGALG00000012699 117 0.705 - - - - - - 0.705 - - - mitochondrial calcium uniporter regulator 1 [Source:HGNC Symbol;Acc:HGNC:21097]
54. INO80 ENSGALG00000008553 846 0.705 - - - - - - 0.705 - - - INO80 complex subunit [Source:NCBI gene;Acc:423210]
55. TMEM114 ENSGALG00000039005 13 0.705 - - - - - - - - - 0.705 transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
56. ZBTB38 ENSGALG00000036543 116 0.705 - - - - - - 0.705 - - - zinc finger and BTB domain containing 38 [Source:HGNC Symbol;Acc:HGNC:26636]
57. CTBP2 ENSGALG00000009738 937 0.703 - - - - - - 0.703 - - - C-terminal binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2495]
58. IPPK ENSGALG00000004684 39 0.701 - - - - - - 0.701 - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
59. FADS2 ENSGALG00000007178 116 0.701 - - - - - - 0.701 - - - fatty acid desaturase 2 [Source:NCBI gene;Acc:423122]
60. CACNA1D ENSGALG00000005332 34 0.7 - - - - - - 0.700 - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
61. IL17REL ENSGALG00000008554 5 0.7 - - - - - - 0.700 - - - interleukin 17 receptor E like [Source:HGNC Symbol;Acc:HGNC:33808]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA