Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A3

Gene Name Gene ID Reads Annotation
COL4A3 ENSGALG00000038612 41 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]











Genes with expression patterns similar to COL4A3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A3 ENSGALG00000038612 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
2. MUT ENSGALG00000016697 43 2 - - - - - - 1.000 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
3. SCN4B ENSGALG00000007409 22 1.941 - - - - - - 0.941 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
4. TRAF6 ENSGALG00000007932 12 1.855 - - - - - - - 1.000 - 0.855 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
5. gga-mir-218-1 ENSGALG00000018327 3 1.855 - - - - - - - 1.000 - 0.855 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
6. MYO1D ENSGALG00000000674 14 1.789 - - - - - - 0.789 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
7. FLT4 ENSGALG00000005802 5 1.77 - - - 0.770 - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
8. SLC6A6 ENSGALG00000006425 31 1.77 - - - 0.770 - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
9. ENSGALG00000005482 ENSGALG00000005482 1 1.77 - - - 0.770 - - - 1.000 - -
10. SMTN 18 1.742 - - - - - - - 1.000 - 0.742 smoothelin, transcript variant X2
11. EHD4 ENSGALG00000008950 22 1.499 - - - 0.750 0.749 - - - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
12. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
13. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
14. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
15. RMST RMST 2 1 - - - - - - - 1.000 - -
16. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
17. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
18. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
19. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
20. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
21. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
22. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
23. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
24. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
25. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
26. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
27. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
28. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
29. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
30. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
31. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
32. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
33. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
34. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
35. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
36. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
37. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
38. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
39. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
40. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
41. NMNAT3 ENSGALG00000026187 11 1 - - - - - - - 1.000 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
42. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
43. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
44. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
45. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
46. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
47. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
48. FGF13 ENSGALG00000006508 8 1 - - - - 1.000 - - - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
49. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
50. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
51. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
52. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
53. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
54. CFTII CFTII 6 1 - - - - - - - 1.000 - -
55. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
56. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
57. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
58. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
59. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
60. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
61. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
62. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
63. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
64. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
65. IL-3 IL-3 1 1 - - - - 1.000 - - - - -
66. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
67. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
68. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
69. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
70. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
71. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
72. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
73. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
74. PLEKHA1 ENSGALG00000034548 34 1 - - - - 1.000 - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
75. SLC26A4 ENSGALG00000007998 2 1 - - - - 1.000 - - - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
76. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
77. LICOS LICOS 13 1 - - - - - - - 1.000 - -
78. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
79. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
80. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
81. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
82. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
83. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
84. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
85. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
86. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
87. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
88. GUCY1B3 29 1 - - - - 1.000 - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
89. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
90. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
91. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
92. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
93. OLFM4 ENSGALG00000016943 7 1 - - - - 1.000 - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
94. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
95. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
96. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
97. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
98. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
99. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
100. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA