Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A3

Gene Name Gene ID Reads Annotation
COL4A3 ENSGALG00000038612 41 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]











Genes with expression patterns similar to COL4A3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A3 ENSGALG00000038612 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
2. MUT ENSGALG00000016697 43 2 - - - - - - 1.000 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
3. SCN4B ENSGALG00000007409 22 1.941 - - - - - - 0.941 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
4. gga-mir-218-1 ENSGALG00000018327 3 1.855 - - - - - - - 1.000 - 0.855 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
5. TRAF6 ENSGALG00000007932 12 1.855 - - - - - - - 1.000 - 0.855 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
6. MYO1D ENSGALG00000000674 14 1.789 - - - - - - 0.789 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
7. SLC6A6 ENSGALG00000006425 31 1.77 - - - 0.770 - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
8. FLT4 ENSGALG00000005802 5 1.77 - - - 0.770 - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
9. ENSGALG00000005482 ENSGALG00000005482 1 1.77 - - - 0.770 - - - 1.000 - -
10. SMTN 18 1.742 - - - - - - - 1.000 - 0.742 smoothelin, transcript variant X2
11. EHD4 ENSGALG00000008950 22 1.499 - - - 0.750 0.749 - - - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
12. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
13. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
14. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
15. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
16. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
17. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
18. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
19. ISPD ENSGALG00000010795 7 1 - - - - 1.000 - - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
20. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
21. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
22. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
23. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
24. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
25. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
26. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
27. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
28. GUCY1B3 29 1 - - - - 1.000 - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
29. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
30. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
31. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
32. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
33. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
34. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
35. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
36. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
37. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
38. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
39. MEGF6L ENSGALG00000009458 14 1 - - - - 1.000 - - - - - multiple EGF-like-domains 6-like, transcript variant X21
40. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
41. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
42. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
43. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
44. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
45. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
46. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
47. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
48. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
49. FRMD4A ENSGALG00000034992 6 1 - - - - - - - 1.000 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
50. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
51. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
52. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
53. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
54. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
55. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
56. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
57. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
58. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
59. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
60. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
61. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
62. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
63. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
64. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
65. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
66. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
67. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
68. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
69. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
70. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
71. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
72. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
73. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
74. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
75. BCOR ENSGALG00000016245 85 1 - - - - 1.000 - - - - - BCL6 corepressor, transcript variant X8
76. OLFM4 ENSGALG00000016943 7 1 - - - - 1.000 - - - - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
77. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
78. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
79. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
80. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
81. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
82. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
83. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
84. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
85. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
86. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
87. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
88. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
89. BAFF BAFF 40 1 - - - - - - - 1.000 - -
90. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
91. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
92. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
93. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
94. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
95. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
96. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
97. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
98. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
99. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
100. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA