Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL4A3

Gene Name Gene ID Reads Annotation
COL4A3 ENSGALG00000038612 41 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]











Genes with expression patterns similar to COL4A3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL4A3 ENSGALG00000038612 41 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
2. MUT ENSGALG00000016697 43 2 - - - - - - 1.000 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
3. SCN4B ENSGALG00000007409 22 1.941 - - - - - - 0.941 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
4. TRAF6 ENSGALG00000007932 12 1.855 - - - - - - - 1.000 - 0.855 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
5. gga-mir-218-1 ENSGALG00000018327 3 1.855 - - - - - - - 1.000 - 0.855 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
6. MYO1D ENSGALG00000000674 14 1.789 - - - - - - 0.789 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
7. FLT4 ENSGALG00000005802 5 1.77 - - - 0.770 - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
8. SLC6A6 ENSGALG00000006425 31 1.77 - - - 0.770 - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
9. ENSGALG00000005482 ENSGALG00000005482 1 1.77 - - - 0.770 - - - 1.000 - -
10. SMTN 18 1.742 - - - - - - - 1.000 - 0.742 smoothelin, transcript variant X2
11. EHD4 ENSGALG00000008950 22 1.499 - - - 0.750 0.749 - - - - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
12. FADS6 ENSGALG00000029445 12 1 - - - - - - - 1.000 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
13. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
14. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
15. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
16. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
17. IL18R1 ENSGALG00000040621 12 1 - - - - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
18. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
19. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
20. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
21. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
22. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
23. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
24. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
25. ENSGALG00000022967 ENSGALG00000022967 240 1 - - - - - - - 1.000 - -
26. PYROXD2 ENSGALG00000007014 14 1 - - - - - - - 1.000 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
27. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
28. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
29. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
30. NMNAT3 ENSGALG00000026187 11 1 - - - - - - - 1.000 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
31. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
32. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
33. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
34. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
35. ENSGALG00000020738 ENSGALG00000020738 2 1 - - - - 1.000 - - - - -
36. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
37. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
38. BLB1 ENSGALG00000000141 13 1 - - - - - - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
39. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
40. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
41. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
42. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
43. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
44. IL-3 IL-3 1 1 - - - - 1.000 - - - - -
45. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
46. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
47. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
48. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
49. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
50. RMST RMST 2 1 - - - - - - - 1.000 - -
51. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
52. CFTII CFTII 6 1 - - - - - - - 1.000 - -
53. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
54. FGF13 ENSGALG00000006508 8 1 - - - - 1.000 - - - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
55. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
56. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
57. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
58. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
59. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
60. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
61. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
62. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
63. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
64. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
65. PLEKHA1 ENSGALG00000034548 34 1 - - - - 1.000 - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
66. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
67. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
68. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
69. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
70. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
71. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
72. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
73. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
74. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
75. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
76. STMN2 ENSGALG00000039690 989 1 - - - - - - - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
77. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
78. MESP2 ENSGALG00000008275 2 1 - - - - 1.000 - - - - - mesoderm posterior bHLH transcription factor 2
79. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
80. SLC26A4 ENSGALG00000007998 2 1 - - - - 1.000 - - - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
81. CFD ENSGALG00000040832 222 1 - - - - - - - 1.000 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
82. FOXN4 ENSGALG00000005062 7 1 - - - - 1.000 - - - - - forkhead box N4 [Source:NCBI gene;Acc:416898]
83. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
84. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
85. DSTYK ENSGALG00000041123 12 1 - - - - 1.000 - - - - - dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
86. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
87. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
88. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
89. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
90. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
91. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
92. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
93. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
94. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
95. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
96. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
97. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
98. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
99. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
100. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA