Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL27A1

Gene Name Gene ID Reads Annotation
COL27A1 ENSGALG00000006958 12 collagen type XXVII alpha 1 chain, transcript variant X5











Genes with expression patterns similar to COL27A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL27A1 ENSGALG00000006958 12 4 - - 1.000 - - 1.000 - 1.000 - 1.000 collagen type XXVII alpha 1 chain, transcript variant X5
2. RIBC2 ENSGALG00000014232 13 1.665 - - - - - 0.720 - 0.945 - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
3. IQSEC1 ENSGALG00000005042 24 1.642 - - - - - - - 0.724 - 0.918 IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
4. ACER2 ENSGALG00000015081 18 1 - - - - - - - 1.000 - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
5. CNKSR2L ENSGALG00000007028 4 1 - - - - - - - - - 1.000 connector enhancer of kinase suppressor of Ras 2-like
6. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - - - 1.000 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
7. ENSGALG00000026897 ENSGALG00000026897 6 1 - - - - - - - - - 1.000
8. ENSGALG00000027059 ENSGALG00000027059 7 1 - - - - - - - - - 1.000
9. ENSGALG00000027458 ENSGALG00000027458 2 1 - - - - - - - - - 1.000
10. RASSF7 ENSGALG00000044251 8 1 - - - - - - - - - 1.000 Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
11. C14orf159 C14orf159 7 1 - - - - - - - - - 1.000
12. PIFO ENSGALG00000023763 11 1 - - - - - - - - - 1.000 primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
13. CD274 1 1 - - - - - - - - - 1.000 CD274 molecule, transcript variant X4
14. L3MBTL1 1 1 - - - - - - - - - 1.000 l(3)mbt-like 1 (Drosophila)
15. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - - - 1.000 general transcription factor IIE subunit 1-like
16. PCOLCE2 ENSGALG00000002623 8 1 - - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
17. VNN1 ENSGALG00000013993 11 1 - - - - - - - - - 1.000 vanin 1 [Source:NCBI gene;Acc:421702]
18. ENSGALG00000029029 ENSGALG00000029029 10 1 - - - - - - - - - 1.000
19. ACACB 6 1 - - - - - - - - - 1.000 acetyl-CoA carboxylase beta
20. MYO19 9 1 - - - - - - - - - 1.000 myosin XIX, transcript variant X5
21. GALNT15 ENSGALG00000011235 1 1 - - - - - - - - - 1.000 polypeptide N-acetylgalactosaminyltransferase 15 [Source:HGNC Symbol;Acc:HGNC:21531]
22. GRM1 ENSGALG00000012297 41 1 - - - - - - - - - 1.000 glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
23. FAM237A ENSGALG00000020836 21 1 - - - - - - - - - 1.000 family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
24. ERBB4 ENSGALG00000003126 1 1 - - - - - - - - - 1.000 erb-b2 receptor tyrosine kinase 4 [Source:NCBI gene;Acc:395671]
25. HGD ENSGALG00000014966 6 1 - - - - - - - - - 1.000 homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
26. CYB561 ENSGALG00000024031 1 1 - - - - - - - - - 1.000 cytochrome b561 [Source:HGNC Symbol;Acc:HGNC:2571]
27. ASB2 ENSGALG00000010881 4 1 - - - - - - - - - 1.000 ankyrin repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:16012]
28. CERS1 ENSGALG00000003160 3 1 - - - - - - - - - 1.000 ceramide synthase 1 [Source:NCBI gene;Acc:420118]
29. HCLS1 ENSGALG00000039682 34 1 - - - - - - - - - 1.000 hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
30. C2orf50 ENSGALG00000046449 17 1 - - - - - - - - - 1.000 chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
31. SLC6A17 ENSGALG00000000394 10 1 - - - - - - - - - 1.000 solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
32. VWA5A ENSGALG00000028815 19 0.978 - - - - - - - - - 0.978 von Willebrand factor A domain containing 5A, transcript variant X5
33. FAM167B ENSGALG00000003301 11 0.967 - - - - - - - - - 0.967 family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
34. KIF9 ENSGALG00000005517 70 0.96 - - - - - - - - - 0.960 kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
35. LOC421415 ENSGALG00000010024 12 0.956 - - - - - - - - - 0.956 uncharacterized LOC421415, transcript variant X6
36. KCNIP1 ENSGALG00000002132 34 0.952 - - - - - - - - - 0.952 potassium voltage-gated channel interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15521]
37. ENSGALG00000001371 ENSGALG00000001371 53 0.944 - - - - - - - - - 0.944
38. RSPH1 ENSGALG00000043976 6 0.938 - - - - - - - - - 0.938 radial spoke head component 1 [Source:HGNC Symbol;Acc:HGNC:12371]
39. TMC5 ENSGALG00000006911 12 0.937 - - - - - - - - - 0.937 transmembrane channel like 5 [Source:HGNC Symbol;Acc:HGNC:22999]
40. SUN2 ENSGALG00000028230 5 0.937 - - - - - - - - - 0.937 Sad1 and UNC84 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:14210]
41. KIF6 ENSGALG00000010057 84 0.932 - - - - - - - - - 0.932 kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
42. C11orf74 C11orf74 260 0.923 - - - - - - - - - 0.923
43. LLGL1 ENSGALG00000014408 15 0.918 - - - - - - - - - 0.918 LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
44. KCNG1 ENSGALG00000007980 26 0.918 - - - - - - - - - 0.918 potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
45. NDST3 22 0.915 - - - - - - - - - 0.915 N-deacetylase and N-sulfotransferase 3, transcript variant X11
46. AMMECR1 ENSGALG00000008074 5 0.912 - - - - - - - - - 0.912 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
47. ENSGALG00000023852 ENSGALG00000023852 31 0.897 - - - - - - - - - 0.897
48. COL17A1 ENSGALG00000029617 167 0.891 - - - - - - - - - 0.891 collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
49. HYDIN ENSGALG00000002407 3 0.89 - - - - - - - - - 0.890 HYDIN, axonemal central pair apparatus protein [Source:NCBI gene;Acc:427538]
50. SAP30BP ENSGALG00000002415 19 0.888 - - - - - - - - - 0.888 SAP30 binding protein [Source:HGNC Symbol;Acc:HGNC:30785]
51. SNORD103 SNORD103 25 0.884 - - - - - - - - - 0.884
52. RIPPLY2 ENSGALG00000015845 34 0.881 - - - - - - - - - 0.881 ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
53. ATXN1L ENSGALG00000028253 17 0.874 - - - - - - - - - 0.874 ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
54. PPL ENSGALG00000002201 13 0.865 - - - - - - - - - 0.865 periplakin
55. H2AFX ENSGALG00000045705 7 0.864 - - - - - - - - - 0.864 H2A histone family member X
56. LOC415478 ENSGALG00000021171 100 0.859 - - - - - - - - - 0.859 transmembrane protein 2-like, transcript variant X2
57. ENSGALG00000027170 ENSGALG00000027170 6 0.855 - - - - - 0.855 - - - -
58. BLIMP-1 BLIMP-1 214 0.851 - - - - - - - - - 0.851
59. TWF1 ENSGALG00000009595 6 0.85 - - - - - - - - - 0.850 twinfilin actin binding protein 1 [Source:NCBI gene;Acc:417797]
60. GABARAPL3 GABARAPL3 32 0.847 - - - - - - - - - 0.847
61. KIAA1919 KIAA1919 58 0.845 - - - - - - - 0.845 - -
62. NGF ENSGALG00000002556 122 0.838 - - - - - - - 0.838 - - nerve growth factor [Source:NCBI gene;Acc:396466]
63. TNR ENSGALG00000004526 6 0.835 - - - - - 0.835 - - - - tenascin R [Source:NCBI gene;Acc:396213]
64. CD44 ENSGALG00000039080 100 0.834 - - - - - - - - - 0.834 CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
65. ELFN1 ENSGALG00000004209 114 0.833 - - - - - - - - - 0.833 extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
66. FAM149B1 ENSGALG00000002693 16 0.829 - - - - - - - - - 0.829 family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
67. TDH ENSGALG00000016651 3 0.826 - - - - - - - - - 0.826 L-threonine dehydrogenase (pseudogene)
68. ENSGALG00000028333 ENSGALG00000028333 54 0.813 - - - - - - - - - 0.813
69. TTC21B ENSGALG00000010956 124 0.806 - - - - - - - - - 0.806 tetratricopeptide repeat domain 21B [Source:HGNC Symbol;Acc:HGNC:25660]
70. PKP1 ENSGALG00000000299 155 0.804 - - - - - - - - - 0.804 plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
71. TNIP2 ENSGALG00000015666 28 0.8 - - - - - 0.800 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
72. STX19 ENSGALG00000015413 28 0.798 - - - - - - - - - 0.798 syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
73. MLC1 ENSGALG00000040038 206 0.786 - - - - - - - - - 0.786 megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
74. FAM26F 74 0.783 - - - - - - - - - 0.783 family with sequence similarity 26 member F
75. TAL2 ENSGALG00000023114 17 0.782 - - - - - - - - - 0.782 TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
76. HEYL ENSGALG00000044737 3 0.781 - - - - - - - - - 0.781 hes related family bHLH transcription factor with YRPW motif-like [Source:HGNC Symbol;Acc:HGNC:4882]
77. HN1L HN1L 247 0.779 - - - - - - - - - 0.779
78. NDEL1 ENSGALG00000001163 16 0.779 - - - - - - - - - 0.779 Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
79. GSC ENSGALG00000010974 7 0.776 - - - - - - - - - 0.776 goosecoid homeobox [Source:NCBI gene;Acc:396273]
80. KIAA0040 ENSGALG00000030543 53 0.776 - - - - - - - - - 0.776 KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
81. PACSIN1 ENSGALG00000002802 6 0.775 - - - - - 0.775 - - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
82. LRRC39 ENSGALG00000005284 5 0.773 - - - - - - - - - 0.773 leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
83. WDR16 WDR16 22 0.768 - - - - - - - - - 0.768
84. PTPN23 ENSGALG00000038522 93 0.767 - - - - - 0.767 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
85. CNGA3 ENSGALG00000039826 3 0.767 - - - - - 0.767 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
86. LDLRAD3 ENSGALG00000038913 4 0.767 - - - - - 0.767 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
87. NKX2-5 ENSGALG00000002886 81 0.767 - - - - - 0.767 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
88. TRAIL-LIKE ENSGALG00000007240 8 0.767 - - - - - 0.767 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
89. RBM47 ENSGALG00000014267 6 0.767 - - - - - 0.767 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
90. FXYD2 ENSGALG00000007320 168 0.767 - - - - - 0.767 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
91. SPTBN5 395 0.767 - - - - - 0.767 - - - - spectrin beta, non-erythrocytic 5
92. GPR114 GPR114 46 0.767 - - - - - 0.767 - - - -
93. gga-mir-6579-2 ENSGALG00000035346 7 0.767 - - - - - 0.767 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
94. GGT5 ENSGALG00000040504 24 0.767 - - - - - 0.767 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
95. ENSGALG00000023027 ENSGALG00000023027 5 0.767 - - - - - 0.767 - - - -
96. TTC28 ENSGALG00000005676 36 0.767 - - - - - 0.767 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
97. SYT15 ENSGALG00000002046 3 0.767 - - - - - 0.767 - - - - synaptotagmin 15, transcript variant X1
98. EDNRB2 ENSGALG00000007466 1 0.767 - - - - - 0.767 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
99. FIP1L1 ENSGALG00000013943 15 0.767 - - - - - 0.767 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
100. Six3os1 Six3os1 1 0.767 - - - - - 0.767 - - - -

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA