Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL27A1

Gene Name Gene ID Reads Annotation
COL27A1 COL27A1 94










Genes with expression patterns similar to COL27A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL27A1 COL27A1 94 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mir301c 84 1.68 - 0.808 - - - 0.872 - - - microRNA 301c
3. nsun3 ENSDARG00000013023 136 1.669 - 0.874 - - - - 0.795 - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
4. zgc:110782 ENSDARG00000044544 48 1.593 - - - - - 0.787 0.806 - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
5. CT573494.2 CT573494.2 58 1.573 - 0.808 - - - 0.765 - - -
6. CR847906.1 ENSDARG00000099493 88 1.57 - 0.808 - - - - 0.762 - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
7. dre-mir-222a ENSDARG00000090347 131 1.565 - - - - - 0.712 0.853 - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
8. SACS ENSDARG00000091042 15 1.555 - 0.808 - - - 0.747 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
9. MOV10L1 MOV10L1 21 1.546 - 0.808 - - - 0.738 - - -
10. fam175b fam175b 37 1.546 - 0.808 - - - 0.738 - - -
11. cx45.6 cx45.6 26 1.536 - 0.749 - - - 0.787 - - -
12. rs1 rs1 70 1.52 0.712 0.808 - - - - - - -
13. arhgef3 ENSDARG00000013834 3 1.52 0.712 0.808 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
14. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.52 0.712 0.808 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
15. RGS9BP ENSDARG00000086756 65 1.52 0.712 0.808 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
16. l3mbtl3 ENSDARG00000025983 12 1.52 0.712 0.808 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
17. nrd1 nrd1 324 1.514 - - - - - 0.704 0.810 - -
18. SPAG1 SPAG1 44 1.509 - 0.724 - - - - 0.785 - -
19. ucn3l ENSDARG00000087241 29 1.499 0.712 - - - - 0.787 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
20. si:dkey-58f10.9 si:dkey-58f10.9 86 1.474 - 0.772 - - - - 0.702 - -
21. pdk3b ENSDARG00000099791 50 1.471 - 0.722 - - - - 0.749 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
22. si:dkey-24g18.3 si:dkey-24g18.3 60 1.469 0.725 - - - - - 0.744 - -
23. si:dkey-32m20.1 43 1.464 - 0.712 - - - 0.752 - - - si:dkey-32m20.1
24. eva1bb ENSDARG00000100698 223 1.429 0.712 - - - - 0.717 - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
25. si:dkey-209n16.2 ENSDARG00000095914 27 1.428 0.712 - - - - - 0.716 - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
26. CLNK 8 0.978 - 0.978 - - - - - - - cytokine dependent hematopoietic cell linker
27. CABZ01026370.1 CABZ01026370.1 286 0.945 - 0.945 - - - - - - -
28. ovca2 ENSDARG00000103748 38 0.944 - 0.944 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
29. TMEM116 TMEM116 96 0.944 - 0.944 - - - - - - -
30. parp12a ENSDARG00000042496 82 0.944 - 0.944 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
31. rtn4r ENSDARG00000090035 46 0.944 - 0.944 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
32. si:ch211-76l23.6 si:ch211-76l23.6 68 0.944 - 0.944 - - - - - - -
33. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.921 - 0.921 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
34. hsd17b7 ENSDARG00000088140 185 0.912 - 0.912 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
35. SMARCC2 ENSDARG00000077946 702 0.911 - 0.911 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
36. mapk8ip2 ENSDARG00000063157 467 0.911 - 0.911 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
37. sesn1 ENSDARG00000020693 198 0.904 - - - - - - 0.904 - - sestrin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-408]
38. zgc:174310 ENSDARG00000076442 112 0.899 - 0.899 - - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
39. impa2 ENSDARG00000059411 210 0.894 - - - - - 0.894 - - - inositol(myo)-1(or 4)-monophosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-349]
40. 5S_rRNA_20 5S_rRNA_20 79 0.893 - - - - - - 0.893 - -
41. lrrk2 ENSDARG00000006169 82 0.892 - 0.892 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
42. si:dkey-262g12.3 ENSDARG00000094612 41 0.892 - 0.892 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
43. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.885 - - - - - - 0.885 - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
44. SETD9 ENSDARG00000074456 66 0.878 - - - - - - 0.878 - - SET domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-120727-15]
45. golt1ba ENSDARG00000022795 121 0.878 - - - - - - 0.878 - - golgi transport 1Ba [Source:ZFIN;Acc:ZDB-GENE-041210-157]
46. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 0.878 - - - - - - 0.878 - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
47. tgs1 190 0.872 - 0.872 - - - - - - - trimethylguanosine synthase 1, transcript variant X1
48. CCNJ ENSDARG00000059917 115 0.871 - - - - - - 0.871 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
49. myo3a ENSDARG00000010186 117 0.869 - - - - - 0.869 - - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
50. GPX2 ENSDARG00000089149 10 0.863 - - - - - - 0.863 - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
51. ggh ENSDARG00000037176 9 0.862 0.862 - - - - - - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
52. hsp70l_1 ENSDARG00000055723 72 0.862 0.862 - - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
53. f2rl1.1 ENSDARG00000068856 47 0.862 0.862 - - - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
54. cth1 ENSDARG00000057328 13 0.862 0.862 - - - - - - - - cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
55. si:ch211-131e11.14 si:ch211-131e11.14 7 0.862 0.862 - - - - - - - -
56. st6galnac ENSDARG00000086292 29 0.862 0.862 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
57. LPHN1_2 LPHN1_2 19 0.862 0.862 - - - - - - - -
58. chrna6 ENSDARG00000055559 60 0.862 0.862 - - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
59. CU424462.2 CU424462.2 73 0.861 - 0.861 - - - - - - -
60. pald1b ENSDARG00000039352 66 0.861 - - - - - - 0.861 - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
61. PIGG PIGG 106 0.86 - 0.860 - - - - - - -
62. zgc:174178 zgc:174178 104 0.855 - - - - - - 0.855 - -
63. thap11 ENSDARG00000036055 238 0.854 - - - - - - 0.854 - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
64. ZNF784_3 ZNF784_3 44 0.854 - - - - - - 0.854 - -
65. AL935186.6 ENSDARG00000112275 5 0.853 - 0.853 - - - - - - -
66. dixdc1a ENSDARG00000025302 716 0.853 - 0.853 - - - - - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
67. trim35-40 ENSDARG00000042116 398 0.853 - 0.853 - - - - - - - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
68. ARMCX3 ARMCX3 328 0.851 - - - - - - 0.851 - -
69. ZNF337_24 ZNF337_24 16 0.85 - - - - - - 0.850 - -
70. cyr61l2 ENSDARG00000099985 725 0.845 0.845 - - - - - - - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
71. SASH1 SASH1 274 0.844 - 0.844 - - - - - - -
72. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.84 - - - - - - 0.840 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
73. tube1 ENSDARG00000043982, ENSDARG00000096620 96 0.839 - - - - - - 0.839 - - tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]
74. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.839 - - - - - - 0.839 - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
75. eps15 ENSDARG00000078216 246 0.838 - - - - - - 0.838 - - epidermal growth factor receptor pathway substrate 15 [Source:ZFIN;Acc:ZDB-GENE-081104-264]
76. jmjd4 ENSDARG00000058995 199 0.837 - 0.837 - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
77. ENSDARG00000075779 ENSDARG00000075779 64 0.835 - - - - - - 0.835 - -
78. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.835 - - - - - - 0.835 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
79. CR925880.1 CR925880.1 196 0.834 - - - - - 0.834 - - -
80. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.834 - - - - - - 0.834 - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
81. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.834 - 0.834 - - - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
82. RPS11 ENSDARG00000053058 32 0.834 - 0.834 - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
83. cacnb4b ENSDARG00000062174 159 0.834 - 0.834 - - - - - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
84. CABZ01019904.1 ENSDARG00000104193 6 0.834 - 0.834 - - - - - - -
85. TMEM100 TMEM100 258 0.831 - 0.831 - - - - - - -
86. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.83 0.830 - - - - - - - -
87. PLXDC2 ENSDARG00000059950 220 0.83 0.830 - - - - - - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
88. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.829 - - - - - - 0.829 - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
89. si:ch211-249c2.1 ENSDARG00000102941 49 0.827 - 0.827 - - - - - - - si:ch211-249c2.1 [Source:ZFIN;Acc:ZDB-GENE-060503-317]
90. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 0.827 - 0.827 - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
91. zgc:100951 ENSDARG00000111442 24 0.827 - 0.827 - - - - - - - zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
92. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 0.827 - 0.827 - - - - - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
93. TMEM182 TMEM182 78 0.827 - 0.827 - - - - - - -
94. BX323050.1 BX323050.1 116 0.827 - 0.827 - - - - - - -
95. fubp3 ENSDARG00000086896 21 0.827 - 0.827 - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
96. GPR153 ENSDARG00000087601 48 0.827 - 0.827 - - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
97. si:dkey-66g10.2 ENSDARG00000092845 28 0.827 - 0.827 - - - - - - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
98. cdh13 ENSDARG00000014215 106 0.827 - 0.827 - - - - - - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
99. zgc:171452 ENSDARG00000074069 6 0.827 - 0.827 - - - - - - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
100. ela2 ENSDARG00000056744, ENSDARG00000111667 73 0.827 - 0.827 - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]

There are 851 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA