Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL25A1

Gene Name Gene ID Reads Annotation
COL25A1 ENSGALG00000039411 5 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]











Genes with expression patterns similar to COL25A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL25A1 ENSGALG00000039411 5 3 - - 1.000 - - - 1.000 - - 1.000 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
2. TMTC1 ENSGALG00000012956 160 1.923 - - - - - - 1.000 - - 0.923 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
3. SUFU ENSGALG00000008096 307 1.781 - - - - - - 1.000 - - 0.781 SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
4. ENSGALG00000027796 ENSGALG00000027796 7 1.745 - - - - - - 1.000 - - 0.745
5. FZD10 ENSGALG00000042003 11 1 - - - - - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
6. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
7. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
8. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
9. TNFRSF9 9 1 - - - - - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
10. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
11. MMP9 ENSGALG00000006992 78 1 - - - - - - 1.000 - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
12. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
13. FAM60A FAM60A 109 1 - - - - - - 1.000 - - -
14. ENSGALG00000006384 ENSGALG00000006384 3 1 - - - - - - 1.000 - - -
15. NUAK1 ENSGALG00000012662 411 1 - - - - - - 1.000 - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
16. SLC25A22 ENSGALG00000039335 2 1 - - - - - - 1.000 - - - solute carrier family 25 member 22 [Source:NCBI gene;Acc:429678]
17. TPO ENSGALG00000016370 98 1 - - - - - - 1.000 - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
18. YTHDF3 ENSGALG00000039774 170 1 - - - - - - 1.000 - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
19. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - 1.000 - - -
20. GAB3 ENSGALG00000008408 19 1 - - - - - - 1.000 - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
21. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -
22. LYG2 ENSGALG00000016761 7 1 - - - - - - - - - 1.000 lysozyme g2 [Source:NCBI gene;Acc:395708]
23. CKV6.3 CKV6.3 13 1 - - - - - - - - - 1.000
24. PCYT1B 190 1 - - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
25. CSMD3 ENSGALG00000031578 23 1 - - - - - - 1.000 - - - CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
26. JDP2 ENSGALG00000010322 11 1 - - - - - - 1.000 - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
27. SNORA53 SNORA53 6 1 - - - - - - - - - 1.000
28. OBSL1 ENSGALG00000011242 22 1 - - - - - - 1.000 - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
29. LPAR5 ENSGALG00000014455 10 1 - - - - - - 1.000 - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
30. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
31. CLRN2 ENSGALG00000027453 3 1 - - - - - - 1.000 - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
32. NDEL1 ENSGALG00000001163 16 1 - - - - - - 1.000 - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
33. CMBL ENSGALG00000013033 3 1 - - - - - - 1.000 - - - carboxymethylenebutenolidase homolog, transcript variant X4
34. NOG ENSGALG00000003114 12 1 - - - - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
35. CUBN ENSGALG00000008704 21 1 - - - - - - - - - 1.000 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
36. XKRX ENSGALG00000006637 13 1 - - - - - - - - - 1.000 XK related, X-linked, transcript variant X4
37. LRFN2 ENSGALG00000010050 28 1 - - - - - - 1.000 - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
38. PKN2 ENSGALG00000006237 37 1 - - - - - - 1.000 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
39. Mar-04 Mar-04 7 1 - - - - - - 1.000 - - -
40. MC5R ENSGALG00000032087 2 1 - - - - - - 1.000 - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
41. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
42. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
43. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
44. VIPR1 ENSGALG00000005259 3 1 - - - - - - - - - 1.000 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
45. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
46. ENSGALG00000026222 ENSGALG00000026222 3 1 - - - - - - - - - 1.000
47. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
48. GLRA4 ENSGALG00000004936 23 1 - - - - - - 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
49. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
50. SNX13 ENSGALG00000010840 13 1 - - - - - - 1.000 - - - sorting nexin 13 [Source:NCBI gene;Acc:420598]
51. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
52. UBAP1 ENSGALG00000021378 11 1 - - - - - - 1.000 - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
53. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
54. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
55. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
56. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
57. BF1 ENSGALG00000033932 18 1 - - - - - - - - - 1.000 MHC BF1 class I [Source:NCBI gene;Acc:693260]
58. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
59. ENTPD5 ENSGALG00000010202 69 0.986 - - - - - - - - - 0.986 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
60. MANSC4 32 0.985 - - - - - - - - - 0.985 MANSC domain containing 4, transcript variant X1
61. SORL1 ENSGALG00000006598 39 0.982 - - - - - - - - - 0.982 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
62. FAM126B ENSGALG00000020869 19 0.978 - - - - - - - - - 0.978 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
63. AREG ENSGALG00000010866 16 0.968 - - - - - - - - - 0.968 amphiregulin [Source:NCBI gene;Acc:428752]
64. COL23A1 ENSGALG00000006708 181 0.967 - - - - - - - - - 0.967 collagen type XXIII alpha 1 chain, transcript variant X1
65. IKZF1 ENSGALG00000013086 58 0.964 - - - - - - - - - 0.964 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
66. PEAK1 ENSGALG00000002759 39 0.96 - - - - - - - - - 0.960 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
67. UTS2RL ENSGALG00000012419 118 0.956 - - - - - - - - - 0.956 urotensin-2 receptor-like
68. TC2N ENSGALG00000010738 92 0.944 - - - - - - - - - 0.944 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
69. ARHGAP15 ENSGALG00000012421 58 0.936 - - - - - - - - - 0.936 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
70. GABRB4 GABRB4 12 0.934 - - - - - - - - - 0.934
71. MUC5B MUC5B 62 0.932 - - - - - - - - - 0.932
72. CHSY3 ENSGALG00000026899 80 0.932 - - - - - - - - - 0.932 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
73. ZFAT ENSGALG00000037698 34 0.931 - - - - - - - - - 0.931 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
74. CCDC147 CCDC147 53 0.929 - - - - - - - - - 0.929
75. KIAA1549L ENSGALG00000012020 33 0.925 - - - - - - - - - 0.925 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
76. SERPINB14 SERPINB14 196 0.923 - - - - - - - - - 0.923
77. IL34 ENSGALG00000028466 270 0.922 - - - - - - - - - 0.922 interleukin 34
78. SYDE2 ENSGALG00000038776 192 0.917 - - - - - - - - - 0.917 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
79. MYH1G ENSGALG00000028612 7 0.916 - - - - - - - - - 0.916 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
80. FRRS1 ENSGALG00000005418 332 0.914 - - - - - - - - - 0.914 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
81. CDKL5 ENSGALG00000016529 26 0.914 - - - - - - - - - 0.914 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
82. FGF7 ENSGALG00000028158 189 0.914 - - - - - - - - - 0.914 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
83. ENSGALG00000001734 ENSGALG00000001734 408 0.909 - - - - - - - - - 0.909
84. GABRD ENSGALG00000001282 8 0.908 - - - - - - - - - 0.908 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
85. CCNI2 ENSGALG00000023812 21 0.906 - - - - - - - - - 0.906 cyclin I family member 2, transcript variant X2
86. EPG5 ENSGALG00000036259 71 0.903 - - - - - - - - - 0.903 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
87. PIK3C2G ENSGALG00000013117 53 0.895 - - - - - - - - - 0.895 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
88. FMN1 ENSGALG00000009723 100 0.894 - - - - - - - - - 0.894 formin 1 [Source:NCBI gene;Acc:386747]
89. E2F3 ENSGALG00000012680 21 0.891 - - - - - - - - - 0.891 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
90. ZBTB6 ENSGALG00000021570 15 0.891 - - - - - - - - - 0.891 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
91. RAB11FIP1 41 0.891 - - - - - - - - - 0.891 RAB11 family interacting protein 1, transcript variant X2
92. CARD9 ENSGALG00000001889 83 0.889 - - - - - - - - - 0.889 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
93. DGKE ENSGALG00000003131 17 0.888 - - - - - - - - - 0.888 diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
94. GABRG4 GABRG4 16 0.884 - - - - - - - - - 0.884
95. CEP250 ENSGALG00000026151 163 0.881 - - - - - - - - - 0.881 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
96. CCDC39 ENSGALG00000021855 23 0.877 - - - - - - - - - 0.877 coiled-coil domain containing 39
97. LRBA ENSGALG00000010061 67 0.877 - - - - - - - - - 0.877 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
98. RNF19B ENSGALG00000039716 662 0.876 - - - - - - - - - 0.876 ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
99. LOC417937 ENSGALG00000011717 31 0.873 - - - - - - - - - 0.873 solute carrier family 23 member 1-like, transcript variant X1
100. AQP3 ENSGALG00000002452 97 0.87 - - - - - - - - - 0.870 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]

There are 86 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA