Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL24A1

Gene Name Gene ID Reads Annotation
COL24A1 ENSGALG00000006864 161 collagen type XXIV alpha 1 chain, transcript variant X4











Genes with expression patterns similar to COL24A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL24A1 ENSGALG00000006864 161 7 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 collagen type XXIV alpha 1 chain, transcript variant X4
2. ZC3HAV1 ENSGALG00000013911 162 1.666 - - - - - - - - 0.939 0.727 zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
3. ENSGALG00000005445 ENSGALG00000005445 16 1.619 - - - - - - - 0.850 - 0.769
4. FOXK1 ENSGALG00000004460 1483 1.598 - - - - - 0.703 - - 0.895 - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
5. gga-mir-6681 ENSGALG00000027840 546 1.592 - - 0.751 - - - - - 0.841 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
6. TMEM206 ENSGALG00000009822 80 1.578 - - 0.802 - - - - - - 0.776 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
7. MRGBP ENSGALG00000005531 79 0.948 - - - - - - - - 0.948 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
8. FLII ENSGALG00000004997 623 0.946 - - - - - - - - 0.946 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
9. CASKIN1 604 0.926 - - - - - - - - 0.926 - CASK interacting protein 1, transcript variant X4
10. SNORD38 SNORD38 537 0.923 - - - - - - - - 0.923 -
11. HAS2 ENSGALG00000029596 4192 0.918 - - - - - - - - 0.918 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
12. PLIN3 ENSGALG00000044632 370 0.906 - - - - - - - - 0.906 - perilipin 3, transcript variant X2
13. UROC1 ENSGALG00000006306 75 0.904 - - - - - - - - - 0.904 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
14. FAM19A4 ENSGALG00000042228 1724 0.903 - - - - - - - - 0.903 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
15. GUCY1A3 718 0.902 - - - - - - - - 0.902 - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
16. TTLL12 ENSGALG00000014167 714 0.901 - - - - - - - - 0.901 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
17. GPC6 ENSGALG00000016900 13 0.9 - - - - - - - - - 0.900 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
18. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.899 - - - - - - - - 0.899 - NCK associated protein 5, transcript variant X8
19. gga-mir-1306 ENSGALG00000025271 1231 0.898 - - - - - - - - 0.898 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
20. DEF8 ENSGALG00000025712 790 0.892 - - - - - - - - 0.892 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
21. ARHGEF10 ENSGALG00000016350 151 0.886 - - 0.886 - - - - - - - Rho guanine nucleotide exchange factor 10 [Source:HGNC Symbol;Acc:HGNC:14103]
22. DYNC2H1 ENSGALG00000041814 1770 0.886 - - - - - - - - 0.886 - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
23. ENSGALG00000026496 ENSGALG00000026496 9 0.886 - - 0.886 - - - - - - -
24. AP4E1 2726 0.885 - - - - - - - - 0.885 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
25. GDAP2 ENSGALG00000014794 523 0.879 - - 0.879 - - - - - - - ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18010]
26. ENSGALG00000019522 ENSGALG00000019522 122 0.879 - - 0.879 - - - - - - -
27. BICD1 ENSGALG00000012934 112 0.878 - - - - - - - - 0.878 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
28. NT5C1B ENSGALG00000016471 1378 0.875 - - - - - - - - 0.875 - 5'-nucleotidase, cytosolic IB
29. TRUB1 ENSGALG00000009091 1005 0.872 - - - - - - - - 0.872 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
30. C7 ENSGALG00000014835 322 0.872 - - - - - - - - 0.872 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
31. NUAK1 ENSGALG00000012662 411 0.871 - - - - - - - - 0.871 - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
32. GPHB5 ENSGALG00000028839 45 0.87 - - - - - - - - - 0.870 glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
33. PLCXD3 ENSGALG00000014845 247 0.87 - - - - - - - - 0.870 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
34. NEIL3 ENSGALG00000010719 47 0.869 - - - - - - - - - 0.869 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
35. PAX2 ENSGALG00000005689 351 0.869 - - 0.869 - - - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
36. DLX3 ENSGALG00000040529 37 0.868 - - - - - - - - - 0.868 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
37. ERAP1 ENSGALG00000014684 713 0.868 - - - - - - - - 0.868 - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
38. SLC10A7 ENSGALG00000010006 2064 0.867 - - - - - - - - 0.867 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
39. ATP6V0E1 10 0.864 - - - - - - - - - 0.864 ATPase H+ transporting V0 subunit e1
40. PPM1H ENSGALG00000009805 3 0.864 - - - - - - - - - 0.864 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
41. KYNU ENSGALG00000012418 353 0.864 - - - - - - - - - 0.864 kynureninase, transcript variant X3
42. CYP2H1 CYP2H1 363 0.864 - - - - - - - - - 0.864
43. HOXD11 ENSGALG00000039629 658 0.864 - - - - - - - - - 0.864 homeobox D11 [Source:NCBI gene;Acc:395328]
44. AGO2 ENSGALG00000040957 25 0.864 - - - - - - - - - 0.864 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
45. ENSGALG00000016213 ENSGALG00000016213 33 0.864 - - - - - - - - - 0.864
46. ENSGALG00000026657 ENSGALG00000026657 4 0.864 - - - - - - - - - 0.864
47. CDK10 ENSGALG00000006144 2424 0.864 - - - - - - - - 0.864 - cyclin dependent kinase 10 [Source:NCBI gene;Acc:415840]
48. PLEKHH3 ENSGALG00000037269 875 0.863 - - - - - - - - 0.863 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
49. LCAT ENSGALG00000028928 484 0.861 - - - - - - - - - 0.861 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
50. WNT5B ENSGALG00000012998 35 0.859 - - - - - - - - - 0.859 Wnt family member 5B [Source:NCBI gene;Acc:418154]
51. WDR72 ENSGALG00000004545 5 0.858 - - - - - - - - - 0.858 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
52. SLC12A8 ENSGALG00000012045 39 0.858 - - - - - - - - - 0.858 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
53. ALOX5 ENSGALG00000005857 73 0.858 - - 0.858 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
54. PARK2 166 0.857 - - 0.857 - - - - - - - parkin RBR E3 ubiquitin protein ligase
55. AGRP ENSGALG00000002244 27 0.856 - - - - - - - - - 0.856 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
56. GPR144 GPR144 30 0.856 - - - - - - - 0.856 - -
57. ROBO1 ENSGALG00000015511 213 0.856 - - 0.856 - - - - - - - roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249]
58. FLCN ENSGALG00000004816 4101 0.856 - - - - - - - - 0.856 - folliculin, transcript variant X1
59. JAKMIP1 ENSGALG00000015528 11 0.856 - - - - - - - - - 0.856 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
60. SK2 SK2 74 0.855 - - 0.855 - - - - - - -
61. RPUSD2 ENSGALG00000041216 9 0.854 - - - - - - - - - 0.854 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
62. DMRT1 ENSGALG00000010160 425 0.854 - - 0.854 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
63. CNST ENSGALG00000010649 18 0.85 - - - - - - - - - 0.850 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
64. SRD5A2 ENSGALG00000010625 23 0.847 - - - - - - - 0.847 - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
65. WDR41 ENSGALG00000004350 16 0.844 - - - - - - - - - 0.844 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
66. C11H16ORF70 C11H16ORF70 7 0.843 - - - - - - - - - 0.843
67. BRD1 ENSGALG00000029379 6047 0.842 - - - - - - - - 0.842 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
68. CACNB2 ENSGALG00000008591 53 0.842 - - - - - - - - - 0.842 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
69. ADAMTS12 55 0.841 - - 0.841 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
70. EXOSC8 ENSGALG00000017048 2939 0.84 - - - - - - - - 0.840 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
71. CLDN15 ENSGALG00000038964 21 0.84 - - 0.840 - - - - - - - claudin 15, transcript variant X4
72. DNAJC13 ENSGALG00000035068 180 0.838 - - 0.838 - - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
73. ST6GALNAC3 ENSGALG00000009027 17 0.838 - - - - - - - - - 0.838 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
74. FGF7 ENSGALG00000028158 189 0.838 - - 0.838 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
75. SGMS2 ENSGALG00000010535 42 0.837 - - 0.837 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
76. TEX33 ENSGALG00000012490 11 0.837 - - 0.837 - - - - - - - testis expressed 33, transcript variant X2
77. RAB3C ENSGALG00000014726 10 0.837 - - 0.837 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
78. LOC771308 ENSGALG00000000274 7 0.837 - - 0.837 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
79. TRIM29 ENSGALG00000042360 34 0.837 - - 0.837 - - - - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
80. ATMIN ENSGALG00000040475 16 0.837 - - 0.837 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
81. MMR1L2 ENSGALG00000028357 7 0.837 - - 0.837 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
82. OSGIN1 ENSGALG00000003323 7 0.837 - - 0.837 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
83. AOX1 ENSGALG00000008185 14 0.837 - - 0.837 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
84. SCG2 ENSGALG00000029819 26 0.837 - - 0.837 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
85. ADCYAP1 ENSGALG00000014858 9 0.837 - - 0.837 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
86. ADORA2B ENSGALG00000014182 26 0.836 - - - - - - - - - 0.836 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
87. ELFN2 ENSGALG00000012446 11 0.836 - - 0.836 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
88. INO80C ENSGALG00000013137 15 0.835 - - - - - - - 0.835 - - INO80 complex subunit C [Source:HGNC Symbol;Acc:HGNC:26994]
89. FAR-2 FAR-2 24 0.834 - - 0.834 - - - - - - -
90. MIA2 ENSGALG00000010189 1223 0.832 - - - - - - - - 0.832 - melanoma inhibitory activity 2, transcript variant X5
91. IFI27L2 1365 0.831 - - - - - - - - 0.831 - interferon, alpha-inducible protein 27-like 2, transcript variant X4
92. SH3GL1 ENSGALG00000001121 159 0.83 - - - - - - - - - 0.830 SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
93. FANCF ENSGALG00000003660 25 0.83 - - - - - - - - - 0.830 FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
94. SLC4A10 ENSGALG00000030032 56 0.828 - - 0.828 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
95. KLC1 ENSGALG00000011528 1621 0.827 - - - - - - - - 0.827 - kinesin light chain 1, transcript variant X6
96. PTPRE ENSGALG00000009823 250 0.825 - - 0.825 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
97. CPPED1 ENSGALG00000040854 202 0.825 - - 0.825 - - - - - - - calcineurin like phosphoesterase domain containing 1 [Source:NCBI gene;Acc:416418]
98. MIB1 ENSGALG00000014974 3583 0.824 - - - - - - - - 0.824 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
99. NPM1 ENSGALG00000002197 24109 0.824 - - - - - - - - 0.824 - nucleophosmin [Source:NCBI gene;Acc:396203]
100. TRIM24 ENSGALG00000012823 2725 0.824 - - - - - - - - 0.824 - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]

There are 286 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA