Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL23A1

Gene Name Gene ID Reads Annotation
COL23A1 ENSGALG00000006708 181 collagen type XXIII alpha 1 chain, transcript variant X1











Genes with expression patterns similar to COL23A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL23A1 ENSGALG00000006708 181 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type XXIII alpha 1 chain, transcript variant X1
2. FAM126B ENSGALG00000020869 19 1.664 - - - - - 0.725 - - - 0.939 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
3. COL25A1 ENSGALG00000039411 5 0.967 - - - - - - - - - 0.967 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
4. LYG2 ENSGALG00000016761 7 0.967 - - - - - - - - - 0.967 lysozyme g2 [Source:NCBI gene;Acc:395708]
5. XKRX ENSGALG00000006637 13 0.967 - - - - - - - - - 0.967 XK related, X-linked, transcript variant X4
6. CUBN ENSGALG00000008704 21 0.967 - - - - - - - - - 0.967 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
7. VIPR1 ENSGALG00000005259 3 0.967 - - - - - - - - - 0.967 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
8. SNORA53 SNORA53 6 0.967 - - - - - - - - - 0.967
9. CKV6.3 CKV6.3 13 0.967 - - - - - - - - - 0.967
10. BF1 ENSGALG00000033932 18 0.967 - - - - - - - - - 0.967 MHC BF1 class I [Source:NCBI gene;Acc:693260]
11. ENSGALG00000026222 ENSGALG00000026222 3 0.967 - - - - - - - - - 0.967
12. SERPINB14 SERPINB14 196 0.964 - - - - - - - - - 0.964
13. MANSC4 32 0.957 - - - - - - - - - 0.957 MANSC domain containing 4, transcript variant X1
14. ENTPD5 ENSGALG00000010202 69 0.948 - - - - - - - - - 0.948 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
15. SORL1 ENSGALG00000006598 39 0.945 - - - - - - - - - 0.945 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
16. AREG ENSGALG00000010866 16 0.929 - - - - - - - - - 0.929 amphiregulin [Source:NCBI gene;Acc:428752]
17. IKZF1 ENSGALG00000013086 58 0.928 - - - - - - - - - 0.928 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
18. SYDE2 ENSGALG00000038776 192 0.928 - - - - - - - - - 0.928 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
19. PIK3C2G ENSGALG00000013117 53 0.92 - - - - - - - - - 0.920 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
20. PEAK1 ENSGALG00000002759 39 0.92 - - - - - - - - - 0.920 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
21. UTS2RL ENSGALG00000012419 118 0.919 - - - - - - - - - 0.919 urotensin-2 receptor-like
22. GABRB4 GABRB4 12 0.916 - - - - - - - - - 0.916
23. TC2N ENSGALG00000010738 92 0.908 - - - - - - - - - 0.908 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
24. FRRS1 ENSGALG00000005418 332 0.907 - - - - - - - - - 0.907 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
25. CHSY3 ENSGALG00000026899 80 0.903 - - - - - - - - - 0.903 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
26. ARHGAP15 ENSGALG00000012421 58 0.899 - - - - - - - - - 0.899 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
27. TMTC1 ENSGALG00000012956 160 0.898 - - - - - - - - - 0.898 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
28. SERGEF ENSGALG00000006231 35 0.896 - - - - - 0.896 - - - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
29. CCBL2 CCBL2 184 0.896 - - - - - 0.896 - - - -
30. ASB7 ENSGALG00000007115 3 0.896 - - - - - 0.896 - - - - ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
31. REEP1 ENSGALG00000015786 7 0.896 - - - - - 0.896 - - - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
32. ZFAT ENSGALG00000037698 34 0.894 - - - - - - - - - 0.894 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
33. MUC5B MUC5B 62 0.894 - - - - - - - - - 0.894
34. KIAA1549L ENSGALG00000012020 33 0.894 - - - - - - - - - 0.894 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
35. CDKL5 ENSGALG00000016529 26 0.891 - - - - - - - - - 0.891 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
36. IL34 ENSGALG00000028466 270 0.891 - - - - - - - - - 0.891 interleukin 34
37. SNORA17 SNORA17 39 0.885 - - - - - - - - - 0.885
38. FGF7 ENSGALG00000028158 189 0.884 - - - - - - - - - 0.884 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
39. CCDC147 CCDC147 53 0.883 - - - - - - - - - 0.883
40. HDAC9 ENSGALG00000010854 49 0.88 - - - - - - - - - 0.880 histone deacetylase 9 [Source:NCBI gene;Acc:420599]
41. MYH1G ENSGALG00000028612 7 0.879 - - - - - - - - - 0.879 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
42. GAN ENSGALG00000013437 11 0.876 - - - - - - - 0.876 - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
43. RBM47 ENSGALG00000014267 6 0.876 - - - - - - - 0.876 - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
44. FNDC7 ENSGALG00000001983 24 0.876 - - - - - - - 0.876 - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
45. RAB11FIP1 41 0.875 - - - - - - - - - 0.875 RAB11 family interacting protein 1, transcript variant X2
46. GABRD ENSGALG00000001282 8 0.871 - - - - - - - - - 0.871 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
47. ENSGALG00000001734 ENSGALG00000001734 408 0.869 - - - - - - - - - 0.869
48. FMN1 ENSGALG00000009723 100 0.865 - - - - - - - - - 0.865 formin 1 [Source:NCBI gene;Acc:386747]
49. CCNI2 ENSGALG00000023812 21 0.863 - - - - - - - - - 0.863 cyclin I family member 2, transcript variant X2
50. NTF3 ENSGALG00000027299 72 0.862 - - - - - - - - - 0.862 neurotrophin 3 [Source:NCBI gene;Acc:428099]
51. EPG5 ENSGALG00000036259 71 0.858 - - - - - - - - - 0.858 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
52. AQP3 ENSGALG00000002452 97 0.853 - - - - - - - - - 0.853 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
53. E2F3 ENSGALG00000012680 21 0.852 - - - - - - - - - 0.852 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
54. CCDC3 ENSGALG00000030140 258 0.851 - - - - - - - - - 0.851 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
55. ZBTB6 ENSGALG00000021570 15 0.851 - - - - - - - - - 0.851 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
56. CFAP99 ENSGALG00000015685 32 0.848 - - - - - - - - - 0.848 cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
57. GRHL1 ENSGALG00000038495 221 0.847 - - - - - - - - - 0.847 grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]
58. GABRG4 GABRG4 16 0.843 - - - - - - - - - 0.843
59. CEP250 ENSGALG00000026151 163 0.842 - - - - - - - - - 0.842 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
60. DGKE ENSGALG00000003131 17 0.841 - - - - - - - - - 0.841 diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
61. CARD9 ENSGALG00000001889 83 0.839 - - - - - - - - - 0.839 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
62. CCDC39 ENSGALG00000021855 23 0.836 - - - - - - - - - 0.836 coiled-coil domain containing 39
63. RAPSN ENSGALG00000008100 53 0.834 - - - - - - - - - 0.834 receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
64. C16orf72 ENSGALG00000007291 228 0.834 - - - - - - - - - 0.834 chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
65. LOC417937 ENSGALG00000011717 31 0.829 - - - - - - - - - 0.829 solute carrier family 23 member 1-like, transcript variant X1
66. LRBA ENSGALG00000010061 67 0.829 - - - - - - - - - 0.829 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
67. RNF19B ENSGALG00000039716 662 0.828 - - - - - - - - - 0.828 ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
68. SKTMOD SKTMOD 207 0.827 - - - - - - - - - 0.827
69. PRLR ENSGALG00000003446 19 0.824 - - - - - - - - - 0.824 prolactin receptor [Source:NCBI gene;Acc:395660]
70. L3HYPDH ENSGALG00000012011 2212 0.823 - - - - - - - - - 0.823 trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
71. TBC1D24 ENSGALG00000009217 43 0.823 - - - - - 0.823 - - - - TBC1 domain family member 24 [Source:NCBI gene;Acc:100859828]
72. LSM14B ENSGALG00000005125 31 0.819 - - - - - - - - - 0.819 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
73. C1orf74 ENSGALG00000001378 39 0.816 - - - - - - - - - 0.816 chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
74. KCTD3 ENSGALG00000009678 335 0.815 - - - - - - - - - 0.815 potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
75. SIM1 ENSGALG00000015466 111 0.815 - - - - - - - - - 0.815 SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
76. EPHA2 ENSGALG00000039895 12 0.812 - - - - - 0.812 - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
77. ATXN3 ENSGALG00000010766 48 0.804 - - - - - - - - - 0.804 ataxin 3 [Source:NCBI gene;Acc:378424]
78. KLHL30 ENSGALG00000006260 32 0.802 - - - - - - - - - 0.802 kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
79. BRINP3 ENSGALG00000033407 40 0.8 - - - - - - - - - 0.800 BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
80. ABAT ENSGALG00000007334 28 0.797 - - - - - - - - - 0.797 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
81. HTATIP2 ENSGALG00000002581 529 0.797 - - - - - - - - - 0.797 HIV-1 Tat interactive protein 2, transcript variant X2
82. GYLTL1B GYLTL1B 3 0.794 - - - - - 0.794 - - - -
83. IFNAR1 ENSGALG00000030363 22 0.792 - - - - - - - - - 0.792 interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
84. MYH11 ENSGALG00000006520 166 0.791 - - - - - 0.791 - - - - myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
85. STXBP5L ENSGALG00000032361 41 0.789 - - - - - - - - - 0.789 syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
86. NT5DC1 ENSGALG00000014964 1540 0.786 - - - - - - - - - 0.786 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21556]
87. SLC6A1 ENSGALG00000004921 118 0.784 - - - - - - - - - 0.784 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
88. FNDC1 ENSGALG00000011663 1040 0.781 - - - - - - - - - 0.781 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
89. OTC ENSGALG00000016254 6 0.779 - - - - - - - 0.779 - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
90. UVRAG ENSGALG00000000845 40 0.778 - - - - - - - - - 0.778 UV radiation resistance associated [Source:NCBI gene;Acc:419091]
91. NDST4 ENSGALG00000012015 43 0.776 - - - - - - - - - 0.776 N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
92. MAPK8 ENSGALG00000006109 51 0.775 - - - - - - - - - 0.775 mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
93. PLEKHJ1 ENSGALG00000000835 55 0.767 - - - - - - - - - 0.767 pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
94. NPPA ENSGALG00000004574 226 0.767 - - - - - - - - - 0.767 natriuretic peptide A [Source:NCBI gene;Acc:395765]
95. CEP250_1 ENSGALG00000026151 23 0.764 - - - - - - - - - 0.764 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
96. SUFU ENSGALG00000008096 307 0.762 - - - - - - - - - 0.762 SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
97. DDX31 ENSGALG00000041473 289 0.76 - - - - - - - - - 0.760 DEAD-box helicase 31 [Source:HGNC Symbol;Acc:HGNC:16715]
98. ST3GAL5 ENSGALG00000033260 19 0.758 - - - - - 0.758 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
99. BMPR-II BMPR-II 33 0.755 - - - - - - - - - 0.755
100. ENSGALG00000021884 ENSGALG00000021884 29 0.753 - - - - - 0.753 - - - -

There are 104 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA