Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL21A1

Gene Name Gene ID Reads Annotation
COL21A1 ENSDARG00000025320 6 collagen, type XXI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-110607-3]










Genes with expression patterns similar to COL21A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL21A1 ENSDARG00000025320 6 2 - - - - 1.000 - - - 1.000 collagen, type XXI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-110607-3]
2. CU469509.2 CU469509.2 4 1 - - - - - - - - 1.000
3. C7H15orf43 C7H15orf43 10 1 - - - - - - - - 1.000
4. si:ch73-132k15.2 ENSDARG00000095867 5 1 - - - - - - - - 1.000 si:ch73-132k15.2 [Source:ZFIN;Acc:ZDB-GENE-110411-191]
5. CT573253.1 CT573253.1 4 1 - - - - - - - - 1.000
6. si:ch211-162i8.6 si:ch211-162i8.6 15 1 - - - - - - - - 1.000
7. ZNF70_4 ZNF70_4 2 1 - - - - - - - - 1.000
8. rxfp3.2a 11 1 - - - - - - - - 1.000 relaxin/insulin-like family peptide receptor 3.2a
9. ros1 ENSDARG00000087197 9 1 - - - - - - - - 1.000 c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
10. si:ch73-6k14.2 ENSDARG00000096031 16 1 - - - - - - - - 1.000 si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
11. 5S_rRNA_31 5S_rRNA_31 3 1 - - - - - - - - 1.000
12. TRIM14_14 TRIM14_14 2 1 - - - - - - - - 1.000
13. si:ch211-93g23.2 ENSDARG00000070558 105 1 - - - - - - - - 1.000 si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
14. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - - - - - 1.000 si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
15. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - - - - 1.000
16. bicd1a ENSDARG00000079496 2 1 - - - - - - - - 1.000 bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
17. si:ch211-271e10.1 ENSDARG00000095735 15 1 - - - - - - - - 1.000 si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
18. Telomerase-vert Telomerase-vert 8 1 - - - - - - - - 1.000
19. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - - - - 1.000
20. PGBD4_5 PGBD4_5 16 1 - - - - - - - - 1.000
21. KCNJ15 ENSDARG00000058988 18 0.992 - - - - - - - - 0.992 potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
22. gdf10a ENSDARG00000095378 12 0.987 - - - - - - - - 0.987 growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
23. CCDC74B CCDC74B 8 0.987 - - - - - - - - 0.987
24. C6H21orf58 C6H21orf58 14 0.983 - - - - - - - - 0.983
25. si:ch211-201p7.9 si:ch211-201p7.9 2 0.983 - - - - - - - - 0.983
26. si:dkey-199m13.5 ENSDARG00000098876 4 0.983 - - - - - - - - 0.983 si:dkey-199m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-174]
27. il1b ENSDARG00000098700 27 0.97 - - - - - - - - 0.970 interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
28. irgf1 ENSDARG00000070774 7 0.969 - - - - - - - - 0.969 immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
29. BX088718.1 ENSDARG00000101847 3 0.969 - - - - - - - - 0.969
30. nif3l1 ENSDARG00000045249 28 0.959 - - - - - - - - 0.959 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
31. syt6a ENSDARG00000076730 4 0.954 - - - - - - - - 0.954 synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
32. hsd17b1 ENSDARG00000027469 11 0.954 - - - - - - - - 0.954 hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
33. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 0.953 - - - - - - - - 0.953 zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
34. ATP5J_1 ATP5J_1 15 0.953 - - - - - - - - 0.953
35. TOP1 ENSDARG00000086775 48 0.952 - - - - - - - - 0.952 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
36. TMEM121 TMEM121 4 0.942 - - - - - - - - 0.942
37. GRIN3B GRIN3B 16 0.932 - - - - - - - - 0.932
38. OVGP1 ENSDARG00000075745 6 0.907 - - - - - - - - 0.907 oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
39. si:dkey-26c10.5 ENSDARG00000088023 9 0.904 - - - - - - - - 0.904 si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
40. si:rp71-20i5.5 si:rp71-20i5.5 9 0.882 - - - - - - - - 0.882
41. C14H5orf45 C14H5orf45 83 0.879 - - - - - - - - 0.879
42. zgc:66313 ENSDARG00000030357 45 0.876 - - - - - - - - 0.876 zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
43. si:ch73-27e22.5 si:ch73-27e22.5 10 0.869 - - - - 0.869 - - - -
44. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.869 - - - - 0.869 - - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
45. si:dkey-3d18.4 si:dkey-3d18.4 43 0.869 - - - - 0.869 - - - -
46. si:dkey-26i13.8 ENSDARG00000062606 13 0.869 - - - - 0.869 - - - - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
47. CR388163.4 CR388163.4 4 0.869 - - - - 0.869 - - - -
48. stk32a ENSDARG00000079499 17 0.869 - - - - 0.869 - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
49. prph2l ENSDARG00000021345 3 0.869 - - - - 0.869 - - - - peripherin 2, like [Source:ZFIN;Acc:ZDB-GENE-041001-147]
50. si:dkey-30c15.12 ENSDARG00000058546 12 0.869 - - - - 0.869 - - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
51. COL5A3 COL5A3 3 0.869 - - - - 0.869 - - - -
52. EFCAB10 EFCAB10 3 0.869 - - - - 0.869 - - - -
53. ankrd1b ENSDARG00000076192 204 0.869 - - - - 0.869 - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
54. zgc:174708 zgc:174708 11 0.868 - - - - 0.868 - - - -
55. mxc ENSDARG00000024789 68 0.868 - - - - 0.868 - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
56. slc37a1 ENSDARG00000086103 16 0.868 - - - - 0.868 - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
57. ftr58 ENSDARG00000071238 10 0.868 - - - - 0.868 - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
58. si:ch211-207e7.1 si:ch211-207e7.1 33 0.867 - - - - 0.867 - - - -
59. cngb3 cngb3 12 0.863 - - - - 0.863 - - - -
60. si:dkey-71h2.2 ENSDARG00000043394 11 0.86 - - - - 0.860 - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
61. DOCK1 ENSDARG00000099093 21 0.86 - - - - 0.860 - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
62. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.86 - - - - 0.860 - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
63. SNX20 ENSDARG00000045554 77 0.858 - - - - - - - - 0.858 sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
64. mir15a-1 36 0.857 - - - - 0.857 - - - - microRNA 15a-1
65. RBBP6_8 RBBP6_8 10 0.856 - - - - 0.856 - - - -
66. FRMD7 ENSDARG00000068958 17 0.854 - - - - 0.854 - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
67. zgc:153499 ENSDARG00000070166 8 0.854 - - - - - - - - 0.854 zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]
68. GALNTL6 ENSDARG00000040048 33 0.854 - - - - 0.854 - - - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
69. si:ch211-149b19.4 ENSDARG00000095911 49 0.853 - - - - 0.853 - - - - si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
70. IPP ENSDARG00000075339 194 0.852 - - - - - - - - 0.852 intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
71. CT583625.1 ENSDARG00000093788 10 0.851 - - - - - - - - 0.851
72. cacna1g ENSDARG00000089913 19 0.85 - - - - 0.850 - - - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
73. SVEP1 ENSDARG00000013526 16 0.849 - - - - - - - - 0.849 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
74. zgc:152857 ENSDARG00000041034 7 0.846 - - - - - - - - 0.846 zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
75. wdr78 ENSDARG00000044400, ENSDARG00000109570 48 0.845 - - - - 0.845 - - - - WD repeat domain 78 [Source:ZFIN;Acc:ZDB-GENE-050522-322]
76. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.844 - - - - 0.844 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
77. si:dkey-200c24.1 si:dkey-200c24.1 7 0.843 - - - - - - - - 0.843
78. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 0.843 - - - - 0.843 - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
79. si:ch211-194e1.8 si:ch211-194e1.8 14 0.842 - - - - 0.842 - - - -
80. zgc:171704 ENSDARG00000018048 14 0.841 - - - - 0.841 - - - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
81. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 0.838 - - - - 0.838 - - - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
82. CABZ01079015.1 CABZ01079015.1 10 0.838 - - - - 0.838 - - - -
83. adam9 ENSDARG00000010070 192 0.838 - - - - 0.838 - - - - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
84. or111-5 ENSDARG00000091791 4 0.838 - - - - 0.838 - - - - odorant receptor, family D, subfamily 111, member 5 [Source:ZFIN;Acc:ZDB-GENE-000329-14]
85. CU459095.1 CU459095.1 7 0.832 - - - - 0.832 - - - -
86. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 0.831 - - - - 0.831 - - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
87. mb21d1 ENSDARG00000021572 12 0.83 - - - - 0.830 - - - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
88. glud1b ENSDARG00000101074 189 0.825 - - - - 0.825 - - - - glutamate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030828-1]
89. TRIM35_1 TRIM35_1 11 0.825 - - - - - - - - 0.825
90. dnah7 ENSDARG00000060165 21 0.823 - - - - 0.823 - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
91. si:dkey-192i18.3 si:dkey-192i18.3 47 0.822 - - - - 0.822 - - - -
92. CCL19 CCL19 6 0.822 - - - - 0.822 - - - -
93. wu:fd60c08 wu:fd60c08 35 0.821 - - - - 0.821 - - - -
94. rab3db ENSDARG00000101534 45 0.818 - - - - 0.818 - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
95. RNaseP_nuc_1 RNaseP_nuc_1 19 0.816 - - - - 0.816 - - - -
96. BX470224.1 ENSDARG00000092793 22 0.814 - - - - - - - - 0.814
97. lrtomt lrtomt 39 0.812 - - - - 0.812 - - - -
98. ZNF337_5 ZNF337_5 48 0.809 - - - - - - - - 0.809
99. rbbp9 ENSDARG00000040713 12 0.809 - - - - 0.809 - - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
100. CABZ01081752.1 ENSDARG00000099245 84 0.808 - - - - 0.808 - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]

There are 53 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA