Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL21A1

Gene Name Gene ID Reads Annotation
COL21A1 ENSGALG00000016292 35 collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]











Genes with expression patterns similar to COL21A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL21A1 ENSGALG00000016292 35 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
2. SEZ6L ENSGALG00000032415 56 1.895 - - - - - 1.000 - 0.895 - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
3. TLR5 ENSGALG00000009392 28 1.822 - - 0.822 - - 1.000 - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
4. STAB1 21 1.802 - - 0.802 - - 1.000 - - - - stabilin 1, transcript variant X2
5. OR11A1 ENSGALG00000041229 9 1.768 - - 0.822 - - - - 0.946 - - olfactory receptor family 11 subfamily A member 1
6. ANO2 ENSGALG00000017271 4 1.702 - - - 0.807 - - - 0.895 - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
7. CACNA1D ENSGALG00000005332 34 1.701 - - - - - 0.806 - 0.895 - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
8. ZNF438 ENSGALG00000007266 26 1.636 - - 0.773 - - - - 0.863 - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
9. PAX-9 PAX-9 491 1.477 - - - - - 0.766 0.711 - - -
10. ENSGALG00000006213 ENSGALG00000006213 7 1 - - - - - 1.000 - - - -
11. CBLN1 ENSGALG00000042664 15 1 - - - - - 1.000 - - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
12. SNORA56 SNORA56 7 1 - - - - - 1.000 - - - -
13. ENSGALG00000002590 ENSGALG00000002590 13 1 - - - - - 1.000 - - - -
14. ENSGALG00000019267 ENSGALG00000019267 11 1 - - - - - 1.000 - - - -
15. A2ML2 ENSGALG00000014252 3 1 - - - - - 1.000 - - - - alpha-2-macroglobulin-like 2, transcript variant X6
16. TMEM119 ENSGALG00000004893 1 1 - - - - - 1.000 - - - - transmembrane protein 119 [Source:HGNC Symbol;Acc:HGNC:27884]
17. ENSGALG00000026975 ENSGALG00000026975 8 1 - - - - - 1.000 - - - -
18. SLC7A4 ENSGALG00000002204 2 1 - - - - - 1.000 - - - - solute carrier family 7 member 4 [Source:HGNC Symbol;Acc:HGNC:11062]
19. SNORA63 SNORA63 2 1 - - - - - 1.000 - - - -
20. CCDC176 CCDC176 10 1 - - - - - 1.000 - - - -
21. SNORA16 SNORA16 0 1 - - - - - 1.000 - - - -
22. ZIC2 ENSGALG00000041083 1 1 - - - - - 1.000 - - - - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
23. WWTR1 ENSGALG00000010412 5 1 - - - - - 1.000 - - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
24. RAP2C ENSGALG00000006061 11 1 - - - - - 1.000 - - - - RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
25. HK3 ENSGALG00000027287 20 1 - - - - - 1.000 - - - - hexokinase 3, transcript variant X3
26. ENSGALG00000006897 ENSGALG00000006897 13 1 - - - - - 1.000 - - - -
27. ENSGALG00000014037 ENSGALG00000014037 3 1 - - - - - 1.000 - - - -
28. B3GNT5 ENSGALG00000032526 4 1 - - - - - 1.000 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Source:NCBI gene;Acc:424960]
29. LOC101750367 ENSGALG00000006693 5 1 - - - - - 1.000 - - - - BPI fold-containing family B member 4-like, transcript variant X3
30. ST6GALNAC2 ENSGALG00000001883 0 1 - - - - - 1.000 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:396159]
31. MCOLN3 ENSGALG00000008709 21 1 - - - - - 1.000 - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
32. ENPEP ENSGALG00000031410 147 1 - - - - - 1.000 - - - - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
33. ZDHHC1 ENSGALG00000002091 3 1 - - - - - 1.000 - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
34. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - 1.000 - - - -
35. KIAA1522 ENSGALG00000003539 1 1 - - - - - 1.000 - - - - KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301]
36. TESK2 ENSGALG00000010230 9 1 - - - - - 1.000 - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
37. FAM173A ENSGALG00000021364 4 1 - - - - - 1.000 - - - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
38. GAB3 ENSGALG00000008408 19 1 - - - - - 1.000 - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
39. TYW1 ENSGALG00000001110 6 1 - - - - - 1.000 - - - - tRNA-yW synthesizing protein 1 homolog, transcript variant X1
40. MRC2 ENSGALG00000000461 48 1 - - - - - 1.000 - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
41. CAP2 ENSGALG00000012715 1 1 - - - - - 1.000 - - - - cyclase associated actin cytoskeleton regulatory protein 2 [Source:HGNC Symbol;Acc:HGNC:20039]
42. CAMK1 ENSGALG00000029912 6 1 - - - - - 1.000 - - - - calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
43. CTNNA3 ENSGALG00000002845 127 1 - - - - - 1.000 - - - - catenin alpha 3 [Source:NCBI gene;Acc:423648]
44. HPDL ENSGALG00000023348 1 1 - - - - - 1.000 - - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
45. ATP10D ENSGALG00000014192 94 1 - - - - - 1.000 - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
46. UST ENSGALG00000012345 7 1 - - - - - 1.000 - - - - uronyl 2-sulfotransferase [Source:HGNC Symbol;Acc:HGNC:17223]
47. SIK3 ENSGALG00000007144 18 1 - - - - - 1.000 - - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
48. TIMP4 ENSGALG00000004969 21 1 - - - - - 1.000 - - - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
49. ENSGALG00000010169 ENSGALG00000010169 5 1 - - - - - 1.000 - - - -
50. PRSS12 ENSGALG00000012004 53 1 - - - - - 1.000 - - - - serine protease 12 [Source:HGNC Symbol;Acc:HGNC:9477]
51. gga-mir-7-3 ENSGALG00000018314 1 1 - - - - - 1.000 - - - - gga-mir-7-3 [Source:miRBase;Acc:MI0001269]
52. TMOD2 ENSGALG00000004740 6 1 - - - - - 1.000 - - - - tropomodulin 2 [Source:HGNC Symbol;Acc:HGNC:11872]
53. ENSGALG00000022531 ENSGALG00000022531 1 1 - - - - - 1.000 - - - -
54. CHRNA10 ENSGALG00000022702 7 1 - - - - - 1.000 - - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
55. KLHL8 ENSGALG00000011017 3 1 - - - - - 1.000 - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
56. TSNARE1 ENSGALG00000037014 2 1 - - - - - 1.000 - - - - t-SNARE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26437]
57. METTL21EP ENSGALG00000016859 1 1 - - - - - 1.000 - - - - methyltransferase like 21E, pseudogene, transcript variant X2
58. CTDSP1 ENSGALG00000027768 2 1 - - - - - 1.000 - - - - CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
59. SESN3 ENSGALG00000017204 7 1 - - - - - 1.000 - - - - sestrin 3, transcript variant X2
60. ENSGALG00000020022 ENSGALG00000020022 1 1 - - - - - 1.000 - - - -
61. ENSGALG00000012518 ENSGALG00000012518 25 0.987 - - 0.987 - - - - - - -
62. HOXA1 ENSGALG00000028095 137 0.982 - - 0.982 - - - - - - - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
63. UNC5D ENSGALG00000001608 4 0.95 - - - - - 0.950 - - - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
64. CELF4 ENSGALG00000002413 10 0.948 - - - - - 0.948 - - - - CUGBP Elav-like family member 4 [Source:HGNC Symbol;Acc:HGNC:14015]
65. SEMA6B ENSGALG00000001171 73 0.946 - - - - - - - 0.946 - - Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
66. PIAS2 ENSGALG00000039434 73 0.946 - - - - - - - 0.946 - - protein inhibitor of activated STAT 2 [Source:NCBI gene;Acc:416383]
67. FGF19 ENSGALG00000028376 104 0.946 - - - - - - - 0.946 - - fibroblast growth factor 19 [Source:NCBI gene;Acc:395394]
68. TNFRSF6B ENSGALG00000006106 12 0.943 - - - - - 0.943 - - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
69. ENSGALG00000024413 ENSGALG00000024413 13 0.942 - - - - - 0.942 - - - -
70. CFD ENSGALG00000040832 222 0.941 - - 0.941 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
71. BTBD3 ENSGALG00000009028 45 0.941 - - - - - - - 0.941 - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
72. KANSL1 ENSGALG00000000603 5 0.94 - - - - - 0.940 - - - - KAT8 regulatory NSL complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24565]
73. FAM126B ENSGALG00000020869 19 0.94 - - - - - 0.940 - - - - family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
74. SULT6B1 ENSGALG00000046375 23 0.938 - - - - - - - 0.938 - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
75. ENSGALG00000008594 ENSGALG00000008594 54 0.928 - - 0.928 - - - - - - -
76. CDC42EP1 ENSGALG00000038556 3 0.923 - - - - - 0.923 - - - - CDC42 effector protein 1 [Source:HGNC Symbol;Acc:HGNC:17014]
77. PIM3 ENSGALG00000023576 30 0.896 - - - - - 0.896 - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:19310]
78. CCKBR ENSGALG00000039837 23 0.895 - - - - - - - 0.895 - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
79. CTSE ENSGALG00000000786 1 0.895 - - - - - - - 0.895 - - cathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]
80. CASKIN2 ENSGALG00000008034 3 0.895 - - - - - - - 0.895 - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
81. ICK ENSGALG00000016321 19 0.895 - - - - - - - 0.895 - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
82. TRAPPC9 ENSGALG00000042766 10 0.895 - - - - - - - 0.895 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
83. MAP3K15 ENSGALG00000016426 1 0.895 - - - - - - - 0.895 - - mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
84. ANPEP ENSGALG00000027501 234 0.895 - - - - - - - 0.895 - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
85. DGKH ENSGALG00000016959 75 0.895 - - 0.895 - - - - - - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
86. KIAA1841 ENSGALG00000007825 22 0.895 - - - - - - - 0.895 - - KIAA1841 [Source:NCBI gene;Acc:421196]
87. CLDN3 ENSGALG00000022557 189 0.895 - - - - - - - 0.895 - - claudin 3 [Source:NCBI gene;Acc:374029]
88. FAM73A FAM73A 7 0.895 - - - - - - - 0.895 - -
89. C1ORF95 C1ORF95 0 0.895 - - - - - - - 0.895 - -
90. CD8B ENSGALG00000015902 3 0.895 - - - - - - - 0.895 - - CD8b molecule [Source:NCBI gene;Acc:396175]
91. PEPCK PEPCK 1 0.895 - - - - - - - 0.895 - -
92. GPR34 ENSGALG00000016227 9 0.895 - - - - - - - 0.895 - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
93. BST1 ENSGALG00000014509 12 0.895 - - - - - - - 0.895 - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
94. MADCAM1 ENSGALG00000028341 6 0.895 - - - - - - - 0.895 - - mucosal vascular addressin cell adhesion molecule 1
95. SLC35F4 ENSGALG00000012094 30 0.895 - - - - - - - 0.895 - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
96. SKIV2L ENSGALG00000035499 45 0.895 - - - - - - - 0.895 - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
97. TBXAS1 ENSGALG00000012791 2 0.895 - - - - - - - 0.895 - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
98. TTC39B ENSGALG00000005416 12 0.895 - - - - - - - 0.895 - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
99. FREM1 ENSGALG00000005426 61 0.895 - - - - - - - 0.895 - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
100. GRHL2 ENSGALG00000037687 3 0.895 - - - - - - - 0.895 - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]

There are 225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA