Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL19A1

Gene Name Gene ID Reads Annotation
COL19A1 ENSGALG00000043584 38 collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]











Genes with expression patterns similar to COL19A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL19A1 ENSGALG00000043584 38 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
2. ENSGALG00000023094 ENSGALG00000023094 15 1 - - - - - - - 1.000 - -
3. ENSGALG00000018479 ENSGALG00000018479 10 1 - - - - - - - 1.000 - -
4. GUCY1B3 29 1 - - - - - - 1.000 - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
5. TJP3 ENSGALG00000000748 45 1 - - - - - - 1.000 - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
6. MAST3 ENSGALG00000003499 21 1 - - - - - - 1.000 - - - microtubule associated serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:19036]
7. CHRNA3 ENSGALG00000003014 6 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
8. TRAF6 ENSGALG00000007932 12 1 - - - - - - 1.000 - - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
9. TNIK ENSGALG00000009298 38 1 - - - - - - 1.000 - - - TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:HGNC:30765]
10. IGHMBP2 ENSGALG00000004328 118 1 - - - - 1.000 - - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
11. CLDN16 ENSGALG00000025821 14 1 - - - - 1.000 - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
12. ATF6 ENSGALG00000032278 71 1 - - - - - - 1.000 - - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
13. WDR27 ENSGALG00000037464 9 1 - - - - - - 1.000 - - - WD repeat domain 27
14. KCNA4 ENSGALG00000012142 6 1 - - - - - - - 1.000 - - potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
15. IPMK ENSGALG00000002710 40 1 - - - - - - 1.000 - - - inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
16. C11orf49 ENSGALG00000008255 36 1 - - - - - - 1.000 - - - chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
17. FARP2 ENSGALG00000005788 6 1 - - - - 1.000 - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
18. SPOCK3 ENSGALG00000009568 33 1 - - - - - - 1.000 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
19. PDE1A ENSGALG00000008885 4 1 - - - - 1.000 - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
20. ENSGALG00000007135 ENSGALG00000007135 3 1 - - - - - - 1.000 - - -
21. MC4R ENSGALG00000012907 1 1 - - - - 1.000 - - - - - melanocortin 4 receptor [Source:NCBI gene;Acc:428485]
22. CDC42EP3 ENSGALG00000010551 15 1 - - - - - - 1.000 - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
23. ZC2HC1A ENSGALG00000035932 17 1 - - - - - - - 1.000 - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
24. SOWAHC ENSGALG00000026360 23 1 - - - - - - - 1.000 - - sosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]
25. CPSF3 ENSGALG00000016424 342 1 - - - - - - 1.000 - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
26. GPR65 ENSGALG00000010595 2 1 - - - - - - - 1.000 - - G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
27. CRB1 ENSGALG00000002287 2 1 - - - - - - 1.000 - - - crumbs 1, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:2343]
28. NR2C2AP ENSGALG00000027375 50 1 - - - - - - 1.000 - - - nuclear receptor 2C2 associated protein [Source:HGNC Symbol;Acc:HGNC:30763]
29. NPHS2 ENSGALG00000004163 850 1 - - - - - - 1.000 - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
30. AIG1 ENSGALG00000013780 27 1 - - - - - - - 1.000 - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
31. TRPM3 ENSGALG00000015126 2 1 - - - - 1.000 - - - - - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
32. VTG1 ENSGALG00000039354 17 1 - - - - 1.000 - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
33. NEK8 ENSGALG00000003979 4 1 - - - - - - - 1.000 - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
34. SLC51A ENSGALG00000007478 6 1 - - - - 1.000 - - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
35. C1orf116 ENSGALG00000001091 34 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
36. PKIA ENSGALG00000035525 20 1 - - - - - - 1.000 - - - protein kinase (cAMP-dependent, catalytic) inhibitor alpha [Source:NCBI gene;Acc:396333]
37. KLRD1 ENSGALG00000014722 27 1 - - - - 1.000 - - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
38. FMO4 ENSGALG00000040292 1 1 - - - - - - - 1.000 - - flavin containing monooxygenase 4 [Source:HGNC Symbol;Acc:HGNC:3772]
39. TMEM11 ENSGALG00000004749 206 1 - - - - - - 1.000 - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
40. XRRA1 ENSGALG00000017310 2 1 - - - - - - 1.000 - - - X-ray radiation resistance associated 1 [Source:HGNC Symbol;Acc:HGNC:18868]
41. CNGA4 ENSGALG00000022704 4 1 - - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
42. MCF2L2 ENSGALG00000008744 8 1 - - - - 1.000 - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
43. ENSGALG00000015220 ENSGALG00000015220 1 1 - - - - - - 1.000 - - -
44. PGA PGA 1 1 - - - - - - - 1.000 - -
45. SLC17A6 ENSGALG00000039254 16 1 - - - - - - 1.000 - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
46. CAMK1 ENSGALG00000029912 6 1 - - - - - - 1.000 - - - calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
47. ANKEF1 ENSGALG00000008996 12 1 - - - - 1.000 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
48. LRCH3 ENSGALG00000007595 21 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
49. CRTAC1 ENSGALG00000017378 15 1 - - - - 1.000 - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
50. ANXA10 ENSGALG00000009573 1 1 - - - - - - 1.000 - - - annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]
51. CHRND ENSGALG00000007899 55 1 - - - - - - - 1.000 - - cholinergic receptor nicotinic delta subunit [Source:NCBI gene;Acc:424940]
52. CELF4 ENSGALG00000002413 10 1 - - - - - - 1.000 - - - CUGBP Elav-like family member 4 [Source:HGNC Symbol;Acc:HGNC:14015]
53. LRRC19 ENSGALG00000045028 2 1 - - - - 1.000 - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
54. H2AFX ENSGALG00000045705 7 1 - - - - - - 1.000 - - - H2A histone family member X
55. CACNG4 ENSGALG00000026091 6 1 - - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit gamma 4 [Source:NCBI gene;Acc:373924]
56. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - - 1.000 - - -
57. PACRGL ENSGALG00000014406 18 0.997 - - - - - - - 0.997 - - parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
58. ZNF511 ENSGALG00000003533 234 0.997 - - - - - - - 0.997 - - zinc finger protein 511 [Source:HGNC Symbol;Acc:HGNC:28445]
59. ENSGALG00000024266 ENSGALG00000024266 5 0.997 - - - - - - - 0.997 - -
60. OBSCN ENSGALG00000032534 20 0.997 - - - - - - - 0.997 - - obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF [Source:HGNC Symbol;Acc:HGNC:15719]
61. GRK5 ENSGALG00000009403 45 0.989 - - - - - - - 0.989 - - G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]
62. SYT4 ENSGALG00000042626 384 0.988 - - - - - - - 0.988 - - synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
63. FAM83B ENSGALG00000016299 17 0.988 - - - - - - - 0.988 - - family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
64. MAPK1 ENSGALG00000001501 34 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
65. SIRT5 ENSGALG00000012692 3196 0.957 - - - - - - - 0.957 - - sirtuin 5 [Source:NCBI gene;Acc:420834]
66. LONRF3 ENSGALG00000008860 55 0.957 - - - - - - - 0.957 - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
67. AGBL5 ENSGALG00000038639 25 0.956 - - - - - - - 0.956 - - ATP/GTP binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:26147]
68. CCDC14 ENSGALG00000044814 65 0.948 - - - - - - - 0.948 - - coiled-coil domain containing 14 [Source:HGNC Symbol;Acc:HGNC:25766]
69. NYAP2 ENSGALG00000004966 24 0.948 - - - - - - - 0.948 - - neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]
70. KCNJ11 ENSGALG00000020505 196 0.945 - - - - - - - 0.945 - - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
71. RHOBTB1 ENSGALG00000003073 56 0.927 - - - - - - 0.927 - - - Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
72. DCLK3 ENSGALG00000034493 50 0.925 - - - - - - - 0.925 - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
73. TMEM8B ENSGALG00000002386 32 0.922 - - - - - - - 0.922 - - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
74. MAP3K21 ENSGALG00000011008 54 0.919 - - - - - - 0.919 - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
75. PTPRS ENSGALG00000004048 70 0.916 - - - - - - - 0.916 - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
76. SERPINC1 ENSGALG00000004591 68 0.91 - - - - - - 0.910 - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
77. IMPG2 ENSGALG00000015322 74 0.904 - - - - - - - 0.904 - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
78. PEX7 ENSGALG00000013874 34 0.9 - - - - - - - 0.900 - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
79. HGSNAT ENSGALG00000010136 18 0.895 - - - - - 0.895 - - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
80. PTPN13 ENSGALG00000011078 62 0.895 - - - - 0.895 - - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
81. PIWIL1 ENSGALG00000002645 23 0.894 - - - - - - 0.894 - - - piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
82. VEGFRKDRL ENSGALG00000007646 18 0.884 - - - - - 0.884 - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
83. EPG5 ENSGALG00000036259 71 0.881 - - - - - - - 0.881 - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
84. PTPN3 ENSGALG00000022909 6 0.881 - - - - - - - 0.881 - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
85. SPP2 ENSGALG00000004129 34 0.878 - - - - - - - 0.878 - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
86. CHAMP1 ENSGALG00000016813 508 0.874 - - - - - - - 0.874 - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
87. TRAF3IP2 ENSGALG00000015026 26 0.871 - - - - - - 0.871 - - - TRAF3 interacting protein 2, transcript variant X1
88. GET4 ENSGALG00000003798 158 0.871 - - - - - - 0.871 - - - golgi to ER traffic protein 4 [Source:NCBI gene;Acc:416450]
89. SYPL1 ENSGALG00000029006 126 0.87 - - - - - - - 0.870 - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
90. GRIK1 ENSGALG00000015835 297 0.868 - - - - - - - 0.868 - - glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]
91. CLEC16A ENSGALG00000007167 66 0.867 - - - - - - - 0.867 - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
92. BTK ENSGALG00000004958 272 0.865 - - - - - 0.865 - - - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
93. ZP1 ENSGALG00000031916 122 0.864 - - - - - - 0.864 - - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
94. MORN5 ENSGALG00000044151 95 0.858 - - - - - - - 0.858 - - MORN repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:17841]
95. HHIPL2 ENSGALG00000045729 9 0.858 - - - - - 0.858 - - - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
96. HTR7_1 ENSGALG00000040549 86 0.857 - - - - - - - 0.857 - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
97. HAPLN4 ENSGALG00000026563 9 0.851 - - - - - - - 0.851 - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
98. IRG1 IRG1 21 0.848 - - - - - - 0.848 - - -
99. CHST1 ENSGALG00000008440 156 0.848 - - - - - - 0.848 - - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
100. TMEM173 ENSGALG00000041129 93 0.846 - - - - - - - 0.846 - - transmembrane protein 173 [Source:NCBI gene;Acc:768990]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA