Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for COL19A1

Gene Name Gene ID Reads Annotation
COL19A1 ENSDARG00000076163, ENSDARG00000096073 12 collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]










Genes with expression patterns similar to COL19A1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. COL19A1 ENSDARG00000076163, ENSDARG00000096073 12 4 - 1.000 - 1.000 - 1.000 - - 1.000 collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
2. cd74b ENSDARG00000036628 8 1.849 - 0.955 - 0.894 - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
3. TMEM151A ENSDARG00000077986 78 1.839 - 1.000 - - - 0.839 - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
4. ppfia4 ENSDARG00000053205 276 1.777 - 0.912 - - - 0.865 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
5. scrt1a ENSDARG00000100821 2687 1.75 - 0.907 - - - 0.843 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
6. rn7sk ENSDARG00000081270 149 1.725 - 0.927 - - - 0.798 - - - RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
7. wfs1b ENSDARG00000074617 69 1.694 - 0.955 - - - 0.739 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
8. nt5c1ba ENSDARG00000018153 31 1.673 - 0.931 - - - 0.742 - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
9. ncanb ENSDARG00000005783 22 1.647 - - - 0.908 - 0.739 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
10. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.63 - 0.778 - - - 0.852 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
11. KAZN KAZN 58 1.622 - 0.893 - 0.729 - - - - -
12. CAMKK2 CAMKK2 184 1.546 - 0.807 - - - 0.739 - - -
13. fgf13b ENSDARG00000056633 455 1.537 - 0.809 - - - 0.728 - - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
14. hivep3a ENSDARG00000075928 17 1.497 - 0.758 - - - 0.739 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
15. si:ch211-214c7.4 ENSDARG00000069595 56 1.472 - 0.733 - - - 0.739 - - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
16. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.42 - 0.709 - - - 0.711 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
17. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - - - 1.000 - - -
18. NRG3 NRG3 22 1 - - - - - 1.000 - - -
19. SEMA6B SEMA6B 35 1 - - - - - 1.000 - - -
20. actl6b ENSDARG00000034107 9 1 - - - - - 1.000 - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
21. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - - 1.000 - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
22. gabrb2 ENSDARG00000079586 33 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
23. SNORA42 SNORA42 24 1 - - - - - 1.000 - - -
24. lactbl1b ENSDARG00000070467 1 1 - - - - - 1.000 - - - lactamase, beta-like 1b [Source:ZFIN;Acc:ZDB-GENE-061207-53]
25. uckl1a ENSDARG00000001686 21 1 - - - - - 1.000 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
26. kcnip3a ENSDARG00000034229 63 1 - - - - - 1.000 - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
27. AL954372.1_1 ENSDARG00000112499 57 1 - - - - - 1.000 - - -
28. CNTNAP3 ENSDARG00000067824 25 1 - - - - - 1.000 - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
29. atp2b1b ENSDARG00000007788 56 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
30. TMEM121 TMEM121 4 1 - - - - - 1.000 - - -
31. CABZ01021433.1 ENSDARG00000105696 74 1 - 1.000 - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
32. lbx1b ENSDARG00000018611 399 0.983 - - - - - 0.983 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
33. amigo3 ENSDARG00000074469 39 0.979 - - - - - 0.979 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
34. gng13b ENSDARG00000037921 215 0.976 - 0.976 - - - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
35. uox ENSDARG00000007024 205 0.966 - 0.966 - - - - - - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
36. prdm14 ENSDARG00000045371 106 0.964 - - - - - 0.964 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
37. sprn ENSDARG00000056004 128 0.963 - - - - - 0.963 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
38. HIST2H4A HIST2H4A 33 0.959 - 0.959 - - - - - - -
39. CT990561.1 ENSDARG00000058284 566 0.959 - 0.959 - - - - - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
40. wt1a ENSDARG00000031420 166 0.959 - 0.959 - - - - - - - wilms tumor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-558]
41. C2CD3 ENSDARG00000074137 51 0.955 - 0.955 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
42. CU929356.4 CU929356.4 86 0.955 - 0.955 - - - - - - -
43. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.955 - 0.955 - - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
44. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.955 - 0.955 - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
45. si:ch211-173m16.1 si:ch211-173m16.1 3 0.955 - 0.955 - - - - - - -
46. nrxn3a ENSDARG00000043746 54 0.955 - 0.955 - - - - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
47. hoxa13b ENSDARG00000036254 404 0.955 - 0.955 - - - - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
48. CR812472.2 ENSDARG00000097380 62 0.955 - 0.955 - - - - - - -
49. RPS6KL1 ENSDARG00000079024 22 0.955 - 0.955 - - - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
50. mbnl3 ENSDARG00000016085 6 0.955 - 0.955 - - - - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
51. si:ch211-253b18.3 si:ch211-253b18.3 4 0.955 - 0.955 - - - - - - -
52. si:dkey-24i24.3 ENSDARG00000088452 27 0.955 - 0.955 - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
53. KHNYN ENSDARG00000092488 10 0.955 - 0.955 - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
54. CABZ01112215.2 CABZ01112215.2 11 0.955 - 0.955 - - - - - - -
55. arvcfa ENSDARG00000074329 53 0.955 - 0.955 - - - - - - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
56. TSPAN17 ENSDARG00000114067 3 0.955 - 0.955 - - - - - - - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]
57. prkchb ENSDARG00000043243 126 0.955 - 0.955 - - - - - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
58. cyp3a65 ENSDARG00000103295 7 0.955 - 0.955 - - - - - - - cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
59. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 0.955 - 0.955 - - - - - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
60. s100s ENSDARG00000036773 90 0.955 - 0.955 - - - - - - - S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
61. gabra5 ENSDARG00000070730 156 0.955 - 0.955 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
62. LRRC2 LRRC2 23 0.955 - 0.955 - - - - - - -
63. iqsec3b ENSDARG00000093091 10 0.955 - 0.955 - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
64. CABZ01021426.1 CABZ01021426.1 25 0.955 - 0.955 - - - - - - -
65. SNORD18_1 SNORD18_1 5 0.955 - 0.955 - - - - - - -
66. antxr1a ENSDARG00000025672 32 0.955 - 0.955 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
67. si:ch211-224l10.4 ENSDARG00000088762 36 0.955 - 0.955 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
68. CABZ01063077.1 CABZ01063077.1 22 0.955 - 0.955 - - - - - - -
69. mecom ENSDARG00000060808 8 0.955 - 0.955 - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
70. si:ch211-191a6.3 si:ch211-191a6.3 6 0.955 - 0.955 - - - - - - -
71. TNFRSF14_8 TNFRSF14_8 6 0.955 - 0.955 - - - - - - -
72. si:dkey-17m8.2 ENSDARG00000035797 40 0.955 - 0.955 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
73. ism2 ism2 153 0.955 - 0.955 - - - - - - -
74. grtp1b ENSDARG00000030269 24 0.955 - 0.955 - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
75. si:dkey-46g23.3 si:dkey-46g23.3 16 0.955 - 0.955 - - - - - - -
76. slc12a8 ENSDARG00000074384 12 0.955 - 0.955 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
77. ttc39a ENSDARG00000074126 7 0.955 - 0.955 - - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
78. si:dkey-58f10.12 ENSDARG00000092680 258 0.955 - 0.955 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
79. CT826375.4 CT826375.4 3 0.955 - 0.955 - - - - - - -
80. srgap2b srgap2b 80 0.955 - 0.955 - - - - - - -
81. TRPC4 TRPC4 18 0.955 - 0.955 - - - - - - -
82. SKOR2 SKOR2 1041 0.955 - - - - - 0.955 - - -
83. RNF14 ENSDARG00000043905 41 0.955 - 0.955 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
84. ARHGAP6 33 0.955 - 0.955 - - - - - - - Rho GTPase activating protein 6
85. lzts2b ENSDARG00000077207 22 0.955 - 0.955 - - - - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
86. zgc:153650 zgc:153650 3 0.955 - 0.955 - - - - - - -
87. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.955 - 0.955 - - - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
88. asic1b ENSDARG00000101866 61 0.955 - 0.955 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
89. efna3b ENSDARG00000098295 319 0.954 - 0.954 - - - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
90. mapk10 ENSDARG00000102730 108 0.952 - - - - - 0.952 - - - mitogen-activated protein kinase 10 [Source:ZFIN;Acc:ZDB-GENE-051120-117]
91. insb ENSDARG00000034610, ENSDARG00000112105 60 0.95 - 0.950 - - - - - - - preproinsulin b [Source:ZFIN;Acc:ZDB-GENE-040113-2]
92. si:ch73-22o12.1 ENSDARG00000062831 251 0.95 - 0.950 - - - - - - - si:ch73-22o12.1 [Source:ZFIN;Acc:ZDB-GENE-110411-27]
93. rmi1 ENSDARG00000041376 674 0.949 - - - - - 0.949 - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
94. si:ch73-287n15.1 si:ch73-287n15.1 20 0.949 - - - - - 0.949 - - -
95. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 0.949 - 0.949 - - - - - - - glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
96. znf511 ENSDARG00000000760 446 0.948 - 0.948 - - - - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
97. nadl1.2 695 0.948 - 0.948 - - - - - - - neural adhesion molecule L1.2, transcript variant X1
98. HEPHL1 HEPHL1 309 0.948 - 0.948 - - - - - - -
99. tbpl2 ENSDARG00000097302 70 0.945 - 0.945 - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
100. si:dkeyp-109b10.4 si:dkeyp-109b10.4 23 0.945 - 0.945 - - - - - - -

There are 869 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA