Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL17A1

Gene Name Gene ID Reads Annotation
COL17A1 ENSGALG00000029617 167 collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]











Genes with expression patterns similar to COL17A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL17A1 ENSGALG00000029617 167 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
2. SLC6A17 ENSGALG00000000394 10 1.673 - - - - 0.782 - - - - 0.891 solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
3. PBX1A PBX1A 96 1.625 - - - - 0.755 - - 0.870 - -
4. CLASP1 ENSGALG00000011645 1378 0.976 - - - - - - 0.976 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
5. PRDM10 632 0.975 - - - - - - 0.975 - - - PR domain 10, transcript variant X10
6. C11H19ORF12 C11H19ORF12 5149 0.975 - - - - - - 0.975 - - -
7. BCAR3 358 0.974 - - - - - - 0.974 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
8. C7orf55 C7orf55 7083 0.974 - - - - - - 0.974 - - -
9. DTX2 ENSGALG00000001905 1475 0.973 - - - - - - 0.973 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
10. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.971 - - - - - - 0.971 - - - pseudouridylate synthase-like 1, transcript variant X8
11. TP53BP1 ENSGALG00000042201 708 0.97 - - - - - - 0.970 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
12. KLF11 ENSGALG00000016440 65 0.968 - - - - - - 0.968 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
13. WHSC1 1712 0.968 - - - - - - 0.968 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
14. SRA1 ENSGALG00000040453 266 0.968 - - - - - - 0.968 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
15. BBS4 ENSGALG00000001798 667 0.967 - - - - - - 0.967 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
16. PIGF ENSGALG00000020057 201 0.967 - - - - - - 0.967 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
17. ESCO1 ENSGALG00000014936 739 0.966 - - - - - - 0.966 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
18. PTDSS2 ENSGALG00000004300 682 0.965 - - - - - - 0.965 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
19. C7orf63 C7orf63 147 0.965 - - - - - - 0.965 - - -
20. SLC28A3 ENSGALG00000012593 131 0.964 - - - - - - 0.964 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
21. LPXN 133 0.964 - - - - - - 0.964 - - - leupaxin, transcript variant X4
22. CLK3 ENSGALG00000001362 2171 0.963 - - - - - - 0.963 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
23. LRR1 ENSGALG00000012230 1062 0.962 - - - - - - 0.962 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
24. APCDD1 ENSGALG00000000894 1482 0.959 - - - - - - 0.959 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
25. ARL6IP4 ENSGALG00000003682 2467 0.959 - - - - - - 0.959 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
26. ARHGEF3 ENSGALG00000005481 683 0.959 - - - - - - 0.959 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
27. PIGL ENSGALG00000004492 669 0.958 - - - - - - 0.958 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
28. TNFRSF11B ENSGALG00000043167 911 0.957 - - - - - - 0.957 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
29. YWHAQ ENSGALG00000016433 3450 0.957 - - - - - - 0.957 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
30. THOC3 ENSGALG00000024172 7617 0.955 - - - - - - 0.955 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
31. NUDCD1 ENSGALG00000040879 2965 0.955 - - - - - - 0.955 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
32. FXYD6 ENSGALG00000025937 4073 0.955 - - - - - - 0.955 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
33. TUFT1 ENSGALG00000032955 1317 0.955 - - - - - - 0.955 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
34. EML1 1941 0.954 - - - - - - 0.954 - - - echinoderm microtubule associated protein like 1, transcript variant X11
35. ASTN2 ENSGALG00000007038 1748 0.954 - - - - - - 0.954 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
36. IWS1 ENSGALG00000001803 2305 0.952 - - - - - - 0.952 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
37. RFFL ENSGALG00000002225 928 0.951 - - - - - - 0.951 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
38. TTI1 ENSGALG00000006791 1218 0.951 - - - - - - 0.951 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
39. AP1S3 ENSGALG00000005171 2981 0.949 - - - - - - 0.949 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
40. MYH15 ENSGALG00000015358 6304 0.949 - - - - - - 0.949 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
41. MRM1 ENSGALG00000039523 2009 0.949 - - - - - - 0.949 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
42. C9orf85 ENSGALG00000026001 4110 0.948 - - - - - - 0.948 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
43. EFNB1 ENSGALG00000036539 2706 0.945 - - - - - - 0.945 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
44. HYAL1 ENSGALG00000000785 1778 0.945 - - - - - - 0.945 - - - hyaluronoglucosaminidase 1, transcript variant X3
45. ANGPTL2 ENSGALG00000000927 2580 0.944 - - - - - - 0.944 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
46. LMO4 ENSGALG00000006252 3686 0.943 - - - - - - 0.943 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
47. SUMF1 ENSGALG00000008286 941 0.942 - - - - - - 0.942 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
48. BEND5 ENSGALG00000010505 3298 0.942 - - - - - - 0.942 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
49. SDK1 ENSGALG00000004420 571 0.942 - - - - - - 0.942 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
50. NRCAM ENSGALG00000009514 490 0.94 - - - - - - 0.940 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
51. LMX1A ENSGALG00000003424 335 0.938 - - - - - - 0.938 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
52. ACTR10 ENSGALG00000012041 2752 0.938 - - - - - - 0.938 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
53. FDFT1 ENSGALG00000016665 3053 0.938 - - - - - - 0.938 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
54. ZNF830 ENSGALG00000013156 3896 0.937 - - - - - - 0.937 - - - zinc finger protein 830
55. OSBPL1A ENSGALG00000015086 2702 0.936 - - - - - - 0.936 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
56. CAPN1 ENSGALG00000041685 4011 0.935 - - - - - - 0.935 - - - calpain 1 [Source:NCBI gene;Acc:693249]
57. MITF ENSGALG00000039583 865 0.934 - - - - - - 0.934 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
58. AP1AR ENSGALG00000028807 2398 0.932 - - - - - - 0.932 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
59. BSDC1 ENSGALG00000003405 3701 0.932 - - - - - - 0.932 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
60. BTBD7 4136 0.932 - - - - - - 0.932 - - - BTB domain containing 7, transcript variant X2
61. GADD45 GADD45 8780 0.932 - - - - - - 0.932 - - -
62. PYCR1 ENSGALG00000007300 7987 0.93 - - - - - - 0.930 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
63. FAM86A FAM86A 1860 0.929 - - - - - - 0.929 - - -
64. ZBTB26 ENSGALG00000042762 1920 0.929 - - - - - - 0.929 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
65. ABHD13 ENSGALG00000016853 4975 0.928 - - - - - - 0.928 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
66. C12orf66 ENSGALG00000027682 2110 0.928 - - - - - - 0.928 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
67. CLN6 ENSGALG00000007981 5656 0.926 - - - - - - 0.926 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
68. RAD51A RAD51A 2132 0.925 - - - - - - 0.925 - - -
69. ASAP2 ENSGALG00000016419 1393 0.924 - - - - - - 0.924 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
70. FREM3 ENSGALG00000020561 1824 0.923 - - - - - - 0.923 - - - FRAS1 related extracellular matrix 3
71. NAPEPLD ENSGALG00000008285 1295 0.923 - - - - - - 0.923 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
72. RAD17 ENSGALG00000015571 1374 0.919 - - - - - - 0.919 - - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
73. OSBPL8 ENSGALG00000010246 4565 0.917 - - - - - - 0.917 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
74. RHOT2 ENSGALG00000002497 1744 0.916 - - - - - - 0.916 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
75. SQSTM1 ENSGALG00000035804 2238 0.915 - - - - - - 0.915 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
76. SLC25A48 ENSGALG00000006341 2606 0.915 - - - - - - 0.915 - - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
77. CRELD2 ENSGALG00000008551 2084 0.914 - - - - - - 0.914 - - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
78. KIAA1468 2062 0.913 - - - - - - 0.913 - - - KIAA1468, transcript variant X5
79. NARFL ENSGALG00000005365 2668 0.913 - - - - - - 0.913 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
80. SLAIN1 ENSGALG00000016913 461 0.912 - - - - - - 0.912 - - - SLAIN motif family member 1 [Source:HGNC Symbol;Acc:HGNC:26387]
81. COL22A1 ENSGALG00000038022 544 0.912 - - - - - - 0.912 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
82. CCDC137 ENSGALG00000004505 2205 0.911 - - - - - - 0.911 - - - coiled-coil domain containing 137 [Source:HGNC Symbol;Acc:HGNC:33451]
83. TMEM14A ENSGALG00000019894 5279 0.911 - - - - - - 0.911 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
84. MPPE1 ENSGALG00000013794 988 0.908 - - - - - - 0.908 - - - metallophosphoesterase 1 [Source:NCBI gene;Acc:421031]
85. DDX42 ENSGALG00000000581 8780 0.908 - - - - - - 0.908 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
86. UHMK1 ENSGALG00000002734 2308 0.907 - - - - - - 0.907 - - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
87. TAGLN3 ENSGALG00000015379 7865 0.907 - - - - - - 0.907 - - - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
88. ANXA11 ENSGALG00000043826 5189 0.905 - - - - - - 0.905 - - - annexin A11 [Source:NCBI gene;Acc:423637]
89. SLC6A15 ENSGALG00000010992 2837 0.905 - - - - - - 0.905 - - - solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]
90. SEL1L3 ENSGALG00000039549 1400 0.905 - - - - - - 0.905 - - - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
91. EPB41L1 ENSGALG00000034171 3616 0.904 - - - - - - 0.904 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
92. ZER1 ENSGALG00000004659 1635 0.904 - - - - - - 0.904 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
93. ADIPOR1 ENSGALG00000000094 1862 0.903 - - - - - - 0.903 - - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
94. SALL1 ENSGALG00000039238 3740 0.9 - - - - - - 0.900 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
95. QRICH1 ENSGALG00000006867 2031 0.899 - - - - - - 0.899 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
96. FAM53A ENSGALG00000015713 3795 0.899 - - - - - - 0.899 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
97. TIRAP ENSGALG00000040224 2578 0.897 - - - - - - 0.897 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
98. LYRM4 ENSGALG00000027339 2917 0.896 - - - - - - 0.896 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
99. GNE ENSGALG00000015331 1577 0.895 - - - - - - 0.895 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
100. TMEM38B ENSGALG00000027472 2465 0.895 - - - - - - 0.895 - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]

There are 341 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA