Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL16A1

Gene Name Gene ID Reads Annotation
COL16A1 31 collagen type XVI alpha 1 chain, transcript variant X4











Genes with expression patterns similar to COL16A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. COL16A1 31 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 collagen type XVI alpha 1 chain, transcript variant X4
2. FARP2 ENSGALG00000005788 6 1 - - - 1.000 - - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
3. ENSGALG00000014148 ENSGALG00000014148 2 1 - - - 1.000 - - - - - -
4. MLH1 ENSGALG00000039169 19 1 - - - 1.000 - - - - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
5. SPNS2 ENSGALG00000001387 2 1 - - - 1.000 - - - - - - sphingolipid transporter 2 [Source:HGNC Symbol;Acc:HGNC:26992]
6. ST3GAL4 ENSGALG00000029747 184 1 - - - 1.000 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]
7. SLC4A11 ENSGALG00000016017 4 1 - - - 1.000 - - - - - - solute carrier family 4 member 11 [Source:HGNC Symbol;Acc:HGNC:16438]
8. FRMD4A ENSGALG00000034992 6 0.985 - - - 0.985 - - - - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
9. ANO2 ENSGALG00000017271 4 0.962 - - - 0.962 - - - - - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
10. CAD ENSGALG00000016524 94 0.933 - - - 0.933 - - - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
11. EFR3B ENSGALG00000016605 234 0.926 - - - 0.926 - - - - - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
12. MAPT ENSGALG00000000625 659 0.901 - - - 0.901 - - - - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
13. NSL1/DC31 NSL1/DC31 43 0.9 - - - 0.900 - - - - - -
14. KCNK4 ENSGALG00000012021 200 0.898 - - - - - - - - - 0.898 potassium channel, subfamily K, member 4, transcript variant X3
15. GPR103 GPR103 18 0.895 - - - 0.895 - - - - - -
16. DOK2 8 0.894 - - - - - - - - - 0.894 docking protein 2, transcript variant X2
17. KK34 ENSGALG00000037851 21 0.894 - - - - - - - - - 0.894 interleukin-like [Source:NCBI gene;Acc:407087]
18. ACA64 ACA64 62 0.894 - - - - - - - - - 0.894
19. SLC26A7 ENSGALG00000033638 14 0.894 - - - - - - - - - 0.894 solute carrier family 26 member 7 [Source:HGNC Symbol;Acc:HGNC:14467]
20. FAM83G ENSGALG00000005087 3 0.894 - - - - - - - - - 0.894 family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
21. ZCCHC7 ENSGALG00000028675 3 0.894 - - - - - - - - - 0.894 zinc finger CCHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:26209]
22. SH2D5 ENSGALG00000044997 2 0.894 - - - - - - - - - 0.894 SH2 domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28819]
23. MDGA1 ENSGALG00000010145 13 0.894 - - - - - - - - - 0.894 MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
24. NTSR1 ENSGALG00000005524 2 0.894 - - - - - - - - - 0.894 neurotensin receptor 1 [Source:NCBI gene;Acc:428149]
25. OXCT1 ENSGALG00000014846 17 0.887 - - - - - - - - - 0.887 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
26. MCM8 ENSGALG00000009195 9 0.885 - - - - - - - - - 0.885 minichromosome maintenance 8 homologous recombination repair factor [Source:NCBI gene;Acc:421314]
27. ENSGALG00000028350 ENSGALG00000028350 317 0.884 - - - - - - - - - 0.884
28. ENSGALG00000019943 ENSGALG00000019943 6 0.882 - - - - - - - - - 0.882
29. MBD5 ENSGALG00000012449 27 0.872 - - - - - - - - - 0.872 methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
30. gga-mir-1647 ENSGALG00000025382 4 0.872 - - - - - - - - - 0.872 gga-mir-1647 [Source:miRBase;Acc:MI0007379]
31. SEMA5A ENSGALG00000028685 6 0.871 - - - - - - - - - 0.871 semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
32. CD101 12 0.871 - - - - - - - - - 0.871 CD101 molecule, transcript variant X4
33. RNF151 ENSGALG00000034803 16 0.865 - - - - - - - - - 0.865 ring finger protein 151, transcript variant X2
34. ENSGALG00000003817 ENSGALG00000003817 45 0.864 - - - 0.864 - - - - - -
35. ATXN10 ENSGALG00000014234 16 0.86 - - - - - - - - - 0.860 ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
36. SLC45A3 ENSGALG00000000703 85 0.86 - - - - - - - - - 0.860 solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
37. SMOX ENSGALG00000015977 18 0.855 - - - - - - - - - 0.855 spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
38. CAT-1 CAT-1 115 0.855 - - - - - - - - - 0.855
39. ENSGALG00000013110 ENSGALG00000013110 51 0.855 - - - - - - - - - 0.855
40. C10orf71 ENSGALG00000027353 19 0.852 - - - - - - - - - 0.852 chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
41. PTPLA PTPLA 43 0.851 - - - - - - - - - 0.851
42. TTR ENSGALG00000015143 9764 0.85 - - - - - - - - - 0.850 transthyretin [Source:NCBI gene;Acc:396277]
43. RUFY3 ENSGALG00000011564 15 0.85 - - - - - 0.850 - - - - RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
44. LEMD3 ENSGALG00000009873 347 0.85 - - - - - - - - - 0.850 LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
45. CHRNA7 ENSGALG00000004096 107 0.849 - - - 0.849 - - - - - - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
46. EDRF1 26 0.849 - - - - - - - - - 0.849 erythroid differentiation regulatory factor 1
47. ARHGEF17 6 0.849 - - - 0.849 - - - - - - Rho guanine nucleotide exchange factor 17
48. COL21A1 ENSGALG00000016292 35 0.845 - - - 0.845 - - - - - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
49. RBM46 ENSGALG00000009278 98 0.844 - - - - - 0.844 - - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
50. DOCK11 ENSGALG00000006017 20 0.838 - - - - - - - - - 0.838 dedicator of cytokinesis 11 [Source:HGNC Symbol;Acc:HGNC:23483]
51. ENSGALG00000019221 ENSGALG00000019221 9 0.838 - - - 0.838 - - - - - -
52. ARHGAP25 ENSGALG00000035194 74 0.838 - - - - - - - - - 0.838 Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
53. STARD10 ENSGALG00000002577 245 0.835 - - - 0.835 - - - - - - StAR related lipid transfer domain containing 10
54. CHRNB2 ENSGALG00000002707 15 0.835 - - - - - - - - - 0.835 cholinergic receptor nicotinic beta 2 subunit [Source:NCBI gene;Acc:395605]
55. FBRSL1 ENSGALG00000002205 561 0.834 - - - - - - - - - 0.834 fibrosin like 1 [Source:HGNC Symbol;Acc:HGNC:29308]
56. ST6GALNAC2L ENSGALG00000006900 85 0.834 - - - - - - - - - 0.834 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like, transcript variant X3
57. TRMT13 ENSGALG00000005290 95 0.831 - - - - - - - - - 0.831 tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
58. YPEL4 ENSGALG00000007374 23 0.83 - - - - - - - - - 0.830 yippee like 4 [Source:HGNC Symbol;Acc:HGNC:18328]
59. RNF146 ENSGALG00000026820 11 0.83 - - - 0.830 - - - - - - ring finger protein 146 [Source:HGNC Symbol;Acc:HGNC:21336]
60. COQ4 ENSGALG00000004927 245 0.828 - - - - - - - - - 0.828 coenzyme Q4 [Source:HGNC Symbol;Acc:HGNC:19693]
61. LZTFL1 ENSGALG00000033928 3493 0.82 - - - - - - - - - 0.820 leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
62. GPR137C ENSGALG00000012401 3 0.818 - - - - - - - - - 0.818 G protein-coupled receptor 137C [Source:HGNC Symbol;Acc:HGNC:25445]
63. STXBP6 ENSGALG00000009847 224 0.818 - - - - - - - - - 0.818 syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
64. RLBP1 ENSGALG00000006676 52 0.816 - - - - - - - - - 0.816 retinaldehyde binding protein 1 [Source:NCBI gene;Acc:415492]
65. STAB1 21 0.811 - - - 0.811 - - - - - - stabilin 1, transcript variant X2
66. KIF26B ENSGALG00000010664 41 0.81 - - - - - - - - - 0.810 kinesin family member 26B [Source:HGNC Symbol;Acc:HGNC:25484]
67. RASGRF2 ENSGALG00000015598 30 0.808 - - - - - 0.808 - - - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
68. CNP1 ENSGALG00000028638 56 0.807 - - - - - - - - - 0.807 C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
69. GNA14 ENSGALG00000015176 16 0.805 - - - - - - - - - 0.805 G protein subunit alpha 14 [Source:HGNC Symbol;Acc:HGNC:4382]
70. SELENBP1 ENSGALG00000000866 1253 0.802 - - - - - - - - - 0.802 selenium binding protein 1 [Source:NCBI gene;Acc:425664]
71. SS18L1 ENSGALG00000005145 14 0.802 - - - 0.802 - - - - - - SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
72. EVA1CL ENSGALG00000004734 168 0.802 - - - 0.802 - - - - - - protein eva-1 homolog C-like, transcript variant X2
73. LRIG1 ENSGALG00000007483 19 0.8 - - - - - - - - - 0.800 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
74. LOC419851 ENSGALG00000023953 80 0.799 - - - - - - - - - 0.799 complement component 4 binding protein, alpha chain
75. GYS2 ENSGALG00000013265 14 0.799 - - - 0.799 - - - - - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
76. LTK ENSGALG00000008615 33 0.798 - - - - - - - - - 0.798 leukocyte receptor tyrosine kinase
77. YES1 ENSGALG00000014860 31 0.797 - - - 0.797 - - - - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
78. TLR1LB TLR1LB 65 0.797 - - - 0.797 - - - - - -
79. SOWAHC ENSGALG00000026360 23 0.795 - - - - - - - - - 0.795 sosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]
80. ODZ1 ODZ1 124 0.795 - - - - - - - - - 0.795
81. LOXL1 ENSGALG00000028247 672 0.794 - - - - - - - - - 0.794 lysyl oxidase like 1
82. GPR143 ENSGALG00000016615 14 0.794 - - - 0.794 - - - - - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
83. ARL16 49 0.793 - - - - - - - - - 0.793 ADP ribosylation factor like GTPase 16, transcript variant X1
84. MSS51 ENSGALG00000002597 22 0.793 - - - 0.793 - - - - - - MSS51 mitochondrial translational activator [Source:HGNC Symbol;Acc:HGNC:21000]
85. ENSGALG00000007050 ENSGALG00000007050 28 0.786 - - - - - - - - - 0.786
86. CCNJ ENSGALG00000006955 47 0.785 - - - - - - - - - 0.785 cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
87. ACOT6 ENSGALG00000009292 38 0.784 - - - - - - - - - 0.784 acyl-CoA thioesterase 6 [Source:HGNC Symbol;Acc:HGNC:33159]
88. RREB1 ENSGALG00000012799 125 0.783 - - - 0.783 - - - - - - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
89. PPP2R2D ENSGALG00000010471 89 0.781 - - - 0.781 - - - - - - protein phosphatase 2 regulatory subunit Bdelta [Source:NCBI gene;Acc:423970]
90. ITGB8 ENSGALG00000010875 13 0.78 - - - - - - - - - 0.780 integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]
91. RASL11B ENSGALG00000013948 201 0.776 - - - - - - - - - 0.776 RAS like family 11 member B [Source:HGNC Symbol;Acc:HGNC:23804]
92. ENSGALG00000008040 ENSGALG00000008040 114 0.775 - - - - - - - - - 0.775
93. FGFBP2 ENSGALG00000014501 12 0.774 - - - - - - - - - 0.774 fibroblast growth factor binding protein 2 [Source:NCBI gene;Acc:395094]
94. CD300A CD300A 173 0.774 - - - - - 0.774 - - - -
95. TBXA2R ENSGALG00000037888 24 0.773 - - - - - - - - - 0.773 thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
96. TNIK ENSGALG00000009298 38 0.772 - - - - - - - - - 0.772 TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:HGNC:30765]
97. AAGAB ENSGALG00000007887 142 0.768 - - - - - 0.768 - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
98. GNB4 ENSGALG00000008983 26 0.767 - - - - - - - - - 0.767 G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
99. BATF ENSGALG00000010323 96 0.767 - - - 0.767 - - - - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
100. RGS13 ENSGALG00000026810 8 0.763 - - - 0.763 - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA